RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	GDS1	P41913	522 aa		10.94	□□□□□ -0.66
CUE1	YMR264W	IDS2	P46958	469 aa		10.94	□□□□□ -0.66
CUE1	YMR264W	BRX1	Q08235	291 aa	Known RBP	10.94	□□□□□ -0.66
CUE1	YMR264W	PHO80	P20052	293 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	PRP28	P23394	588 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	CWP1	P28319	239 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	MCM7	P38132	845 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	MBA1	P38300	278 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	ALB1	P47019	175 aa	Predicted RBP	10.93	□□□□□ -0.66
CUE1	YMR264W	MSE1	P48525	536 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	BNA5	Q05979	453 aa		10.93	□□□□□ -0.66
CUE1	YMR264W	AI1	P03875	834 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	CAP2	P13517	287 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	IMG1	P25626	169 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	RCN1	P36054	211 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	PZF1	P39933	429 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	ARO8	P53090	500 aa	Known RBP	10.92	□□□□□ -0.66
CUE1	YMR264W	YGR012W	P53206	393 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	RRN9	P53437	365 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	YNR014W	P53719	212 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	NOG1	Q02892	647 aa	Known RBP	10.92	□□□□□ -0.66
CUE1	YMR264W	GPN3	Q06543	272 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	IPK1	Q06667	281 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	SYO1	Q07395	620 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	YOR289W	Q12012	251 aa	Predicted RBP	10.92	□□□□□ -0.66
CUE1	YMR264W	YOL114C	Q12322	202 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	YGR161W-C	Q3E744	92 aa		10.92	□□□□□ -0.66
CUE1	YMR264W	SIR2	P06700	562 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	YGL041W-A	P0C5N3	154 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	SEC12	P11655	471 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	ERD2	P18414	219 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	FPS1	P23900	669 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	MXR2	P25566	168 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	MTC2	P34246	357 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	YIL166C	P40445	542 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	UTP25	P40498	721 aa	Known RBP	10.91	□□□□□ -0.66
CUE1	YMR264W	CIN1	P40987	1014 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	LEM3	P42838	414 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	FET5	P43561	622 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	ATG18	P43601	500 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	APS3	P47064	194 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	MDE1	P47095	244 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	YAT1	P80235	687 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	DML1	Q03652	475 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	SPC19	Q03954	165 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	PLM2	Q04383	521 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	YMR315W	Q04869	349 aa	Known RBP	10.91	□□□□□ -0.66
CUE1	YMR264W	YPR174C	Q06616	221 aa	Predicted RBP	10.91	□□□□□ -0.66
CUE1	YMR264W	RRG7	Q08774	242 aa	Predicted RBP	10.91	□□□□□ -0.66
CUE1	YMR264W	YDL176W	Q12027	708 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	YDR061W	Q12298	539 aa		10.91	□□□□□ -0.66
CUE1	YMR264W	TY1A-NL1	Q12391	440 aa	Known RBP	10.91	□□□□□ -0.66
CUE1	YMR264W	SNF5	P18480	905 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	NAR1	P23503	491 aa	Known RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	SNC1	P31109	117 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	YEF1	P32622	495 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	MDL1	P33310	695 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	RPS27A	P35997	82 aa	Known RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	YBR137W	P38276	179 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	RPS27B	P38711	82 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	10.9	□□□□□ -0.66	not detected
CUE1	YMR264W	YIL165C	P40446	119 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	YGL235W	P53071	178 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	BUD9	P53226	547 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	TDA1	Q03533	586 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	SNT309	Q06091	175 aa	Predicted RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	RGC1	Q06108	1083 aa	Known RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	RTK1	Q12100	620 aa	Predicted RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	YLR125W	Q12138	136 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	YDL177C	Q12257	170 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	SFG1	Q12507	346 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	DFG16	Q99234	619 aa		10.9	□□□□□ -0.66
CUE1	YMR264W	POL2	P21951	2222 aa	Known RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	CYR1	P08678	2026 aa	Known RBP	10.9	□□□□□ -0.66
CUE1	YMR264W	PDE2	P06776	526 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	RPL1A	P0CX43	217 aa	Known RBP	10.89	□□□□□ -0.67
CUE1	YMR264W	RPL1B	P0CX44	217 aa	Known RBP	10.89	□□□□□ -0.67
CUE1	YMR264W	SAC7	P17121	654 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	GPI12	P23797	304 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	10.89	□□□□□ -0.67	not detected
CUE1	YMR264W	DTR1	P38125	572 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	YBR238C	P38330	731 aa	Known RBP	10.89	□□□□□ -0.67
CUE1	YMR264W	SNO4	Q04902	237 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	MFB1	Q04922	465 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	DIC1	Q06143	298 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	HSP33	Q08914	237 aa	Known RBP	10.89	□□□□□ -0.67
CUE1	YMR264W	HSP32	Q08992	237 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	RTN2	Q12443	393 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	PSF1	Q12488	208 aa		10.89	□□□□□ -0.67
CUE1	YMR264W	KIN28	P06242	306 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	BAR1	P12630	587 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	PRE7	P23724	241 aa	Known RBP	10.88	□□□□□ -0.67
CUE1	YMR264W	PBN1	P25580	416 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	AHC2	P25649	128 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	TIM12	P32830	109 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	JEN1	P36035	616 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	CFD1	P40558	293 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	IRC18	P47056	224 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	SAM37	P50110	327 aa		10.88	□□□□□ -0.67
CUE1	YMR264W	IMO32	P53219	342 aa		10.88	□□□□□ -0.67

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms