RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C YGL185CP53100 379 aa5.2□□□□□ -1.58
VBA1YMR088C NOP19P53317 196 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C SOK2P53438 785 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C YNR066CP53752 436 aa5.2□□□□□ -1.58
VBA1YMR088C ARK1P53974 638 aa5.2□□□□□ -1.58
VBA1YMR088C ARG5,6Q01217 863 aa5.2□□□□□ -1.58
VBA1YMR088C CTL1Q03220 320 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C DUS4Q06063 367 aa5.2□□□□□ -1.58
VBA1YMR088C MRX9Q07349 420 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C YET3Q07451 203 aa5.2□□□□□ -1.58
VBA1YMR088C IWR1Q07532 353 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C SLD7Q08457 257 aa5.2□□□□□ -1.58
VBA1YMR088C YTM1Q12024 460 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C FCF2Q12035 217 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C TPT1Q12272 230 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C YIR021W-AQ3E739 70 aa5.2□□□□□ -1.58
VBA1YMR088C TFB5Q3E7C1 72 aaPredicted RBP5.2□□□□□ -1.58
VBA1YMR088C YPR014CQ6B0W2 109 aa5.2□□□□□ -1.58
VBA1YMR088C USO1P25386 1790 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-LR4P0C2I8 440 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C TY1A-DR6P0CX70 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-ER1P0CX71 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-LR2P0CX72 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-PLP0CX73 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-JR1P0CX74 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-LR3P0CX75 440 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-ML2P0CX76 440 aa5.19□□□□□ -1.58
VBA1YMR088C NAM2P11325 894 aa5.19□□□□□ -1.58
VBA1YMR088C HEM13P11353 328 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C GRX2P17695 143 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C RPS1BP23248 255 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C MRPL9P31334 269 aa5.19□□□□□ -1.58
VBA1YMR088C PRP18P33411 251 aaPredicted RBP5.19□□□□□ -1.58
VBA1YMR088C TUL1P36096 758 aa5.19□□□□□ -1.58
VBA1YMR088C NPP2P39997 493 aa5.19□□□□□ -1.58
VBA1YMR088C LCP5P40079 357 aaPredicted RBP5.19□□□□□ -1.58
VBA1YMR088C ELO3P40319 345 aa5.19□□□□□ -1.58
VBA1YMR088C PFK26P40433 827 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C MAD2P40958 196 aa5.19□□□□□ -1.58
VBA1YMR088C PFA3P42836 336 aa5.19□□□□□ -1.58
VBA1YMR088C AAD10P47182 288 aa5.19□□□□□ -1.58
VBA1YMR088C YGR035CP53222 116 aa5.19□□□□□ -1.58
VBA1YMR088C YGR079WP53249 370 aa5.19□□□□□ -1.58
VBA1YMR088C YPR003CP53394 754 aa5.19□□□□□ -1.58
VBA1YMR088C NOG2P53742 486 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C YNL143CP53908 130 aa5.19□□□□□ -1.58
VBA1YMR088C SED5Q01590 340 aa5.19□□□□□ -1.58
VBA1YMR088C YPL014WQ02606 381 aa5.19□□□□□ -1.58
VBA1YMR088C ODC1Q03028 310 aa5.19□□□□□ -1.58
VBA1YMR088C DIG2Q03373 323 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C YML037CQ03703 340 aa5.19□□□□□ -1.58
VBA1YMR088C SDH7Q04401 133 aa5.19□□□□□ -1.58
VBA1YMR088C SMA2Q04658 369 aa5.19□□□□□ -1.58
VBA1YMR088C NAT4Q04751 285 aa5.19□□□□□ -1.58
VBA1YMR088C RRP45Q05636 305 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C YLR225CQ05948 407 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C ATG39Q06159 398 aa5.19□□□□□ -1.58
VBA1YMR088C PAM18Q07914 168 aa5.19□□□□□ -1.58
VBA1YMR088C NRT1Q08485 598 aa5.19□□□□□ -1.58
VBA1YMR088C THI72Q08579 599 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-GR1Q12085 440 aa5.19□□□□□ -1.58
VBA1YMR088C POM33Q12164 279 aa5.19□□□□□ -1.58
VBA1YMR088C ATP14Q12349 124 aa5.19□□□□□ -1.58
VBA1YMR088C LPX1Q12405 387 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C SLO1Q3E784 85 aa5.19□□□□□ -1.58
VBA1YMR088C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C TY1A-OLQ92392 440 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C MEX67Q99257 599 aaKnown RBP5.19□□□□□ -1.58
VBA1YMR088C POL1P13382 1468 aa5.18□□□□□ -1.58
VBA1YMR088C QCR7P00128 127 aa5.18□□□□□ -1.58
VBA1YMR088C SPO7P18410 259 aa5.18□□□□□ -1.58
VBA1YMR088C NUP1P20676 1076 aa5.18□□□□□ -1.58
VBA1YMR088C ERG9P29704 444 aa5.18□□□□□ -1.58
VBA1YMR088C SRB5P32585 307 aa5.18□□□□□ -1.58
VBA1YMR088C PTM1P32857 523 aa5.18□□□□□ -1.58
VBA1YMR088C YPK3P38070 525 aa5.18□□□□□ -1.58
VBA1YMR088C YBR139WP38109 508 aa5.18□□□□□ -1.58
VBA1YMR088C PRS3P38689 320 aaKnown RBP5.18□□□□□ -1.58
VBA1YMR088C MIP6P38760 659 aaKnown RBP5.18□□□□□ -1.58
VBA1YMR088C PPE1P38796 400 aa5.18□□□□□ -1.58
VBA1YMR088C CHL4P38907 458 aa5.18□□□□□ -1.58
VBA1YMR088C ERG28P40030 148 aa5.18□□□□□ -1.58
VBA1YMR088C DSE1P40077 573 aa5.18□□□□□ -1.58
VBA1YMR088C SMX2P40204 77 aaKnown RBP5.18□□□□□ -1.58
VBA1YMR088C SFH5P47008 294 aa5.18□□□□□ -1.58
VBA1YMR088C YJR011CP47086 261 aaPredicted RBP5.18□□□□□ -1.58
VBA1YMR088C SPT20P50875 604 aa5.18□□□□□ -1.58
VBA1YMR088C FLC3P53121 802 aa5.18□□□□□ -1.58
VBA1YMR088C MOT3P54785 490 aaKnown RBP5.18□□□□□ -1.58
VBA1YMR088C YPL077CQ02831 240 aa5.18□□□□□ -1.58
VBA1YMR088C CAC2Q04199 468 aa5.18□□□□□ -1.58
VBA1YMR088C TMN2Q04562 672 aa5.18□□□□□ -1.58
VBA1YMR088C MDM30Q05930 598 aa5.18□□□□□ -1.58
VBA1YMR088C TPO1Q07824 586 aa5.18□□□□□ -1.58
VBA1YMR088C FCY22Q12119 530 aa5.18□□□□□ -1.58
VBA1YMR088C NMD4Q12129 218 aa5.18□□□□□ -1.58
VBA1YMR088C YLR046CQ12253 270 aa5.18□□□□□ -1.58
VBA1YMR088C RRI1Q12468 440 aa5.18□□□□□ -1.58
VBA1YMR088C DDP1Q99321 188 aaKnown RBP5.18□□□□□ -1.58
VBA1YMR088C RHO1P06780 209 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms