RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YAL037WP39728 267 aa2.28□□□□□ -2.04
SDC25YLL016W FAU1P40099 211 aa2.28□□□□□ -2.04
SDC25YLL016W PKP2P53170 491 aa2.28□□□□□ -2.04
SDC25YLL016W KTR6P54070 446 aa2.28□□□□□ -2.04
SDC25YLL016W SNT309Q06091 175 aaPredicted RBP2.28□□□□□ -2.04
SDC25YLL016W CDA2Q06703 312 aa2.28□□□□□ -2.04
SDC25YLL016W PBP4Q07362 185 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W GET4Q12125 312 aa2.28□□□□□ -2.04
SDC25YLL016W RKM5Q12367 367 aa2.28□□□□□ -2.04
SDC25YLL016W ATP1P07251 545 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W AQY1P0CD91 305 aa2.28□□□□□ -2.04
SDC25YLL016W YAR066WP0CX18 203 aa2.28□□□□□ -2.04
SDC25YLL016W YHR214WP0CX19 203 aa2.28□□□□□ -2.04
SDC25YLL016W MAS2P11914 482 aa2.28□□□□□ -2.04
SDC25YLL016W SAT4P25333 603 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W ITR1P30605 584 aa2.28□□□□□ -2.04
SDC25YLL016W COS9P36034 407 aa2.28□□□□□ -2.04
SDC25YLL016W MCR1P36060 302 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W BIG1P38813 335 aa2.28□□□□□ -2.04
SDC25YLL016W LYS1P38998 373 aaRIP-Chip data2.28□□□□□ -2.04not detected
SDC25YLL016W COX16P47081 118 aa2.28□□□□□ -2.04
SDC25YLL016W KAP114P53067 1004 aa2.28□□□□□ -2.04
SDC25YLL016W EFM5P53200 248 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W RHO4Q00246 291 aa2.28□□□□□ -2.04
SDC25YLL016W RLI1Q03195 608 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W HER2Q03557 464 aa2.28□□□□□ -2.04
SDC25YLL016W BET5Q03630 159 aa2.28□□□□□ -2.04
SDC25YLL016W ENT5Q03769 411 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W TMN2Q04562 672 aa2.28□□□□□ -2.04
SDC25YLL016W SWF1Q04629 336 aa2.28□□□□□ -2.04
SDC25YLL016W ADH6Q04894 360 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W YRA1Q12159 226 aaKnown RBP2.28□□□□□ -2.04
SDC25YLL016W YOR338WQ99326 363 aa2.28□□□□□ -2.04
SDC25YLL016W TDH2P00358 332 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W PRP16P15938 1071 aaPredicted RBP2.27□□□□□ -2.05
SDC25YLL016W RPL24BP24000 155 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W YKL162CP36052 402 aa2.27□□□□□ -2.05
SDC25YLL016W SWD2P36104 329 aaPredicted RBP2.27□□□□□ -2.05
SDC25YLL016W LDB7P38210 180 aa2.27□□□□□ -2.05
SDC25YLL016W ARN1P38731 627 aa2.27□□□□□ -2.05
SDC25YLL016W YMR134WP40207 237 aa2.27□□□□□ -2.05
SDC25YLL016W SEH1P53011 349 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W YIP1P53039 248 aa2.27□□□□□ -2.05
SDC25YLL016W LIF1P53150 421 aa2.27□□□□□ -2.05
SDC25YLL016W SPR6Q01684 191 aa2.27□□□□□ -2.05
SDC25YLL016W TIM44Q01852 431 aa2.27□□□□□ -2.05
SDC25YLL016W YPL080CQ02826 108 aa2.27□□□□□ -2.05
SDC25YLL016W YMR209CQ03648 457 aa2.27□□□□□ -2.05
SDC25YLL016W MSS11Q03825 758 aa2.27□□□□□ -2.05
SDC25YLL016W DIC1Q06143 298 aa2.27□□□□□ -2.05
SDC25YLL016W TPO3Q06451 622 aa2.27□□□□□ -2.05
SDC25YLL016W RAX1Q08760 435 aa2.27□□□□□ -2.05
SDC25YLL016W PFA4Q12006 378 aa2.27□□□□□ -2.05
SDC25YLL016W ATG31Q12421 196 aa2.27□□□□□ -2.05
SDC25YLL016W YPK2P18961 677 aa2.27□□□□□ -2.05
SDC25YLL016W BUB3P26449 341 aa2.27□□□□□ -2.05
SDC25YLL016W DBP7P36120 742 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W PHO88P38264 188 aaPredicted RBP2.27□□□□□ -2.05
SDC25YLL016W ATG7P38862 630 aa2.27□□□□□ -2.05
SDC25YLL016W TVP23P38962 199 aa2.27□□□□□ -2.05
SDC25YLL016W FAA2P39518 744 aa2.27□□□□□ -2.05
SDC25YLL016W PRM9P39551 298 aa2.27□□□□□ -2.05
SDC25YLL016W LCP5P40079 357 aaPredicted RBP2.27□□□□□ -2.05
SDC25YLL016W NAS6P50086 228 aa2.27□□□□□ -2.05
SDC25YLL016W NRD1P53617 575 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SDC25YLL016W FRE4P53746 719 aa2.27□□□□□ -2.05
SDC25YLL016W BET4Q00618 327 aa2.27□□□□□ -2.05
SDC25YLL016W GIS1Q03833 894 aa2.27□□□□□ -2.05
SDC25YLL016W BER1Q06688 274 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W MEX67Q99257 599 aaKnown RBP2.27□□□□□ -2.05
SDC25YLL016W CCH1P50077 2039 aa2.27□□□□□ -2.05
SDC25YLL016W YLR422WQ06409 1932 aa2.27□□□□□ -2.05
SDC25YLL016W SUC2P00724 532 aa2.26□□□□□ -2.05
SDC25YLL016W HEM2P05373 342 aa2.26□□□□□ -2.05
SDC25YLL016W RHO1P06780 209 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W EXO70P19658 623 aa2.26□□□□□ -2.05
SDC25YLL016W DAL82P21705 255 aa2.26□□□□□ -2.05
SDC25YLL016W CTR86P25355 563 aa2.26□□□□□ -2.05
SDC25YLL016W ZUO1P32527 433 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W GCG1P32656 232 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W RBG1P39729 369 aa2.26□□□□□ -2.05
SDC25YLL016W SHO1P40073 367 aa2.26□□□□□ -2.05
SDC25YLL016W VPS25P47142 202 aa2.26□□□□□ -2.05
SDC25YLL016W NOP13P53883 403 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SDC25YLL016W IZH1Q03419 316 aa2.26□□□□□ -2.05
SDC25YLL016W SEY1Q99287 776 aa2.26□□□□□ -2.05
SDC25YLL016W ADH2P00331 348 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W MATALPHA2P0CY08 210 aa2.26□□□□□ -2.05
SDC25YLL016W HMLALPHA2P0CY09 210 aa2.26□□□□□ -2.05
SDC25YLL016W MET16P18408 261 aaPredicted RBP2.26□□□□□ -2.05
SDC25YLL016W ARF2P19146 181 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W ZRC1P20107 442 aa2.26□□□□□ -2.05
SDC25YLL016W MRPL8P22353 238 aa2.26□□□□□ -2.05
SDC25YLL016W MRPS5P33759 307 aa2.26□□□□□ -2.05
SDC25YLL016W SKT5P34226 696 aa2.26□□□□□ -2.05
SDC25YLL016W RFC4P40339 323 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W YGR210CP42942 411 aa2.26□□□□□ -2.05
SDC25YLL016W TAF6P53040 516 aa2.26□□□□□ -2.05
SDC25YLL016W CTL1Q03220 320 aaKnown RBP2.26□□□□□ -2.05
SDC25YLL016W YMR321CQ04898 105 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms