RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MDH1P17505 334 aaKnown RBP RIP-Chip data12.71□□□□□ -0.37not detected
RPN10YHR200W ERD2P18414 219 aa12.71□□□□□ -0.37
RPN10YHR200W CLB2P24869 491 aa12.71□□□□□ -0.37
RPN10YHR200W YPT7P32939 208 aa12.71□□□□□ -0.37
RPN10YHR200W UTP11P34247 250 aaPredicted RBP12.71□□□□□ -0.37
RPN10YHR200W BAP2P38084 609 aa12.71□□□□□ -0.37
RPN10YHR200W MCM7P38132 845 aa12.71□□□□□ -0.37
RPN10YHR200W SEA4P38164 1038 aa12.71□□□□□ -0.37
RPN10YHR200W FMP23P38231 175 aa12.71□□□□□ -0.37
RPN10YHR200W NSG1P38837 291 aa12.71□□□□□ -0.37
RPN10YHR200W CUP9P41817 306 aa12.71□□□□□ -0.37
RPN10YHR200W EFM3P47163 339 aa12.71□□□□□ -0.37
RPN10YHR200W FMP42Q04991 504 aa12.71□□□□□ -0.37
RPN10YHR200W PCL9Q12477 304 aa12.71□□□□□ -0.37
RPN10YHR200W HAP4P14064 554 aa12.7□□□□□ -0.38
RPN10YHR200W LYP1P32487 611 aa12.7□□□□□ -0.38
RPN10YHR200W SUR1P33300 382 aa12.7□□□□□ -0.38
RPN10YHR200W CHL4P38907 458 aa12.7□□□□□ -0.38
RPN10YHR200W YGL235WP53071 178 aa12.7□□□□□ -0.38
RPN10YHR200W DML1Q03652 475 aa12.7□□□□□ -0.38
RPN10YHR200W GRX3Q03835 250 aa12.7□□□□□ -0.38
RPN10YHR200W RRP17Q04031 235 aaPredicted RBP12.7□□□□□ -0.38
RPN10YHR200W ERB1Q04660 807 aaKnown RBP12.7□□□□□ -0.38
RPN10YHR200W GAL83Q04739 417 aa12.7□□□□□ -0.38
RPN10YHR200W YLR346CQ06139 101 aa12.7□□□□□ -0.38
RPN10YHR200W YPR127WQ06494 345 aa12.7□□□□□ -0.38
RPN10YHR200W MDM36Q06820 579 aa12.7□□□□□ -0.38
RPN10YHR200W RBD2Q12270 262 aa12.7□□□□□ -0.38
RPN10YHR200W YPT1P01123 206 aaKnown RBP12.69□□□□□ -0.38
RPN10YHR200W MDL1P33310 695 aa12.69□□□□□ -0.38
RPN10YHR200W GPX1P36014 167 aa12.69□□□□□ -0.38
RPN10YHR200W YJL193WP39542 402 aa12.69□□□□□ -0.38
RPN10YHR200W GDI1P39958 451 aaKnown RBP12.69□□□□□ -0.38
RPN10YHR200W CIN1P40987 1014 aa12.69□□□□□ -0.38
RPN10YHR200W IRC6P43615 237 aa12.69□□□□□ -0.38
RPN10YHR200W SAM37P50110 327 aa12.69□□□□□ -0.38
RPN10YHR200W RBG2P53295 368 aaKnown RBP12.69□□□□□ -0.38
RPN10YHR200W PLM2Q04383 521 aa12.69□□□□□ -0.38
RPN10YHR200W SNO4Q04902 237 aa12.69□□□□□ -0.38
RPN10YHR200W NTG2Q08214 380 aa12.69□□□□□ -0.38
RPN10YHR200W HSP33Q08914 237 aaKnown RBP12.69□□□□□ -0.38
RPN10YHR200W YPL191CQ08930 360 aa12.69□□□□□ -0.38
RPN10YHR200W HSP32Q08992 237 aa12.69□□□□□ -0.38
RPN10YHR200W PRP46Q12417 451 aaPredicted RBP12.69□□□□□ -0.38
RPN10YHR200W DFG16Q99234 619 aa12.69□□□□□ -0.38
RPN10YHR200W SAC7P17121 654 aa12.68□□□□□ -0.38
RPN10YHR200W PHO80P20052 293 aa12.68□□□□□ -0.38
RPN10YHR200W YCR100CP25606 316 aa12.68□□□□□ -0.38
RPN10YHR200W ZUO1P32527 433 aaKnown RBP12.68□□□□□ -0.38
RPN10YHR200W TIM12P32830 109 aa12.68□□□□□ -0.38
RPN10YHR200W SLC1P33333 303 aa12.68□□□□□ -0.38
RPN10YHR200W YPK3P38070 525 aa12.68□□□□□ -0.38
RPN10YHR200W LEU5P38702 357 aa12.68□□□□□ -0.38
RPN10YHR200W YNL195CP40168 261 aa12.68□□□□□ -0.38
RPN10YHR200W IRC7P43623 340 aa12.68□□□□□ -0.38
RPN10YHR200W SSY5P47002 699 aa12.68□□□□□ -0.38
RPN10YHR200W RHO5P53879 331 aaKnown RBP12.68□□□□□ -0.38
RPN10YHR200W DCR2Q05924 578 aa12.68□□□□□ -0.38
RPN10YHR200W MCM21Q06675 368 aa12.68□□□□□ -0.38
RPN10YHR200W ENB1Q08299 606 aa12.68□□□□□ -0.38
RPN10YHR200W AKR2Q12013 749 aa12.68□□□□□ -0.38
RPN10YHR200W YGL041W-AP0C5N3 154 aa12.67□□□□□ -0.38
RPN10YHR200W SEC12P11655 471 aa12.67□□□□□ -0.38
RPN10YHR200W HRB1P38922 454 aaKnown RBP RIP-Chip data12.67□□□□□ -0.38not detected
RPN10YHR200W SNO3P43544 222 aa12.67□□□□□ -0.38
RPN10YHR200W MPA43P53583 542 aaPredicted RBP12.67□□□□□ -0.38
RPN10YHR200W PEX25Q02969 394 aa12.67□□□□□ -0.38
RPN10YHR200W OST6Q03723 332 aa12.67□□□□□ -0.38
RPN10YHR200W TRS23Q03784 219 aa12.67□□□□□ -0.38
RPN10YHR200W EMG1Q06287 252 aaKnown RBP12.67□□□□□ -0.38
RPN10YHR200W AVO1Q08236 1176 aa12.67□□□□□ -0.38
RPN10YHR200W YOR238WQ08634 303 aa12.67□□□□□ -0.38
RPN10YHR200W HNT3Q08702 217 aa12.67□□□□□ -0.38
RPN10YHR200W NPC2Q12408 173 aa12.67□□□□□ -0.38
RPN10YHR200W TAD3Q9URQ3 322 aa12.67□□□□□ -0.38
RPN10YHR200W ARF1P11076 181 aaKnown RBP12.66□□□□□ -0.38
RPN10YHR200W NCP1P16603 691 aaKnown RBP12.66□□□□□ -0.38
RPN10YHR200W NUP1P20676 1076 aa12.66□□□□□ -0.38
RPN10YHR200W NDC1P32500 655 aa12.66□□□□□ -0.38
RPN10YHR200W EMP70P32802 667 aa12.66□□□□□ -0.38
RPN10YHR200W NIC96P34077 839 aa12.66□□□□□ -0.38
RPN10YHR200W YKL077WP36081 392 aa12.66□□□□□ -0.38
RPN10YHR200W YBR139WP38109 508 aa12.66□□□□□ -0.38
RPN10YHR200W NAB3P38996 802 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
RPN10YHR200W STB1P42845 420 aa12.66□□□□□ -0.38
RPN10YHR200W ECL1P48235 211 aa12.66□□□□□ -0.38
RPN10YHR200W CUZ1P53899 274 aa12.66□□□□□ -0.38
RPN10YHR200W PAL1Q05518 499 aaKnown RBP12.66□□□□□ -0.38
RPN10YHR200W YOL073CQ08232 322 aa12.66□□□□□ -0.38
RPN10YHR200W BDS1Q08347 646 aa12.66□□□□□ -0.38
RPN10YHR200W YOR389WQ08912 624 aa12.66□□□□□ -0.38
RPN10YHR200W YDL109CQ12103 647 aa12.66□□□□□ -0.38
RPN10YHR200W MCP1Q12106 302 aa12.66□□□□□ -0.38
RPN10YHR200W HAA1Q12753 694 aaKnown RBP12.66□□□□□ -0.38
RPN10YHR200W TRS65P32893 560 aa12.65□□□□□ -0.38
RPN10YHR200W YKL071WP36086 256 aa12.65□□□□□ -0.38
RPN10YHR200W HXT9P40885 567 aa12.65□□□□□ -0.38
RPN10YHR200W HXT11P54862 567 aa12.65□□□□□ -0.38
RPN10YHR200W EKI1Q03764 534 aa12.65□□□□□ -0.38
RPN10YHR200W MGR3Q04472 501 aa12.65□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 612.7 ms