RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W PHO84P25297 587 aaKnown RBP2.45□□□□□ -2.02
LOC1YFR001W LAS1P36146 502 aaPredicted RBP2.45□□□□□ -2.02
LOC1YFR001W RCK2P38623 610 aa2.45□□□□□ -2.02
LOC1YFR001W ECM34P38728 170 aa2.45□□□□□ -2.02
LOC1YFR001W RBG1P39729 369 aa2.45□□□□□ -2.02
LOC1YFR001W STB1P42845 420 aa2.45□□□□□ -2.02
LOC1YFR001W EFM3P47163 339 aa2.45□□□□□ -2.02
LOC1YFR001W YGR067CP53243 804 aa2.45□□□□□ -2.02
LOC1YFR001W YNL143CP53908 130 aa2.45□□□□□ -2.02
LOC1YFR001W SUR7P54003 302 aa2.45□□□□□ -2.02
LOC1YFR001W MRX11Q03079 207 aa2.45□□□□□ -2.02
LOC1YFR001W RPS19AP07280 144 aaKnown RBP2.44□□□□□ -2.02
LOC1YFR001W RPS19BP07281 144 aaPredicted RBP2.44□□□□□ -2.02
LOC1YFR001W MXR2P25566 168 aa2.44□□□□□ -2.02
LOC1YFR001W HMX1P32339 317 aa2.44□□□□□ -2.02
LOC1YFR001W MRPS5P33759 307 aa2.44□□□□□ -2.02
LOC1YFR001W IST2P38250 946 aa2.44□□□□□ -2.02
LOC1YFR001W RRT13P40042 185 aa2.44□□□□□ -2.02
LOC1YFR001W MOB2P43563 287 aa2.44□□□□□ -2.02
LOC1YFR001W YHC3P47040 408 aa2.44□□□□□ -2.02
LOC1YFR001W NAT4Q04751 285 aa2.44□□□□□ -2.02
LOC1YFR001W YMR310CQ04867 317 aaPredicted RBP2.44□□□□□ -2.02
LOC1YFR001W NFI1Q12216 726 aa2.44□□□□□ -2.02
LOC1YFR001W GLE1Q12315 538 aa2.44□□□□□ -2.02
LOC1YFR001W STE3P06783 470 aa2.43□□□□□ -2.02
LOC1YFR001W SAG1P20840 650 aa2.43□□□□□ -2.02
LOC1YFR001W POT1P27796 417 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
LOC1YFR001W MKK1P32490 508 aa2.43□□□□□ -2.02
LOC1YFR001W SPS19P32573 292 aaKnown RBP2.43□□□□□ -2.02
LOC1YFR001W YHR122WP38829 231 aa2.43□□□□□ -2.02
LOC1YFR001W FHL1P39521 936 aa2.43□□□□□ -2.02
LOC1YFR001W SCS7Q03529 384 aa2.43□□□□□ -2.02
LOC1YFR001W DBP9Q06218 594 aaKnown RBP2.43□□□□□ -2.02
LOC1YFR001W ARF2P19146 181 aaKnown RBP2.42□□□□□ -2.02
LOC1YFR001W APE4P38821 490 aa2.42□□□□□ -2.02
LOC1YFR001W YCH1P42937 148 aa2.42□□□□□ -2.02
LOC1YFR001W COQ5P49017 307 aa2.42□□□□□ -2.02
LOC1YFR001W LSG1P53145 640 aaKnown RBP2.42□□□□□ -2.02
LOC1YFR001W AQR1P53943 586 aa2.42□□□□□ -2.02
LOC1YFR001W CSM3Q04659 317 aa2.42□□□□□ -2.02
LOC1YFR001W ALE1Q08548 619 aa2.42□□□□□ -2.02
LOC1YFR001W APC5Q08683 685 aa2.42□□□□□ -2.02
LOC1YFR001W NBL1Q3E7Y6 73 aa2.42□□□□□ -2.02
LOC1YFR001W STE2D6VTK4 431 aa2.41□□□□□ -2.02
LOC1YFR001W UTR1P21373 530 aa2.41□□□□□ -2.02
LOC1YFR001W FMT1P32785 401 aa2.41□□□□□ -2.02
LOC1YFR001W SIF2P38262 535 aa2.41□□□□□ -2.02
LOC1YFR001W HST1P53685 503 aa2.41□□□□□ -2.02
LOC1YFR001W SED5Q01590 340 aa2.41□□□□□ -2.02
LOC1YFR001W DDC1Q08949 612 aa2.41□□□□□ -2.02
LOC1YFR001W YAL067W-AQ8TGK6 75 aa2.41□□□□□ -2.02
LOC1YFR001W RAD1P06777 1100 aa2.4□□□□□ -2.03
LOC1YFR001W BGL2P15703 313 aaKnown RBP2.4□□□□□ -2.03
LOC1YFR001W HXT2P23585 541 aa2.4□□□□□ -2.03
LOC1YFR001W URA10P30402 227 aa2.4□□□□□ -2.03
LOC1YFR001W DBP7P36120 742 aaKnown RBP2.4□□□□□ -2.03
LOC1YFR001W GGC1P38988 300 aa2.4□□□□□ -2.03
LOC1YFR001W YMR134WP40207 237 aa2.4□□□□□ -2.03
LOC1YFR001W YNL320WP42840 284 aa2.4□□□□□ -2.03
LOC1YFR001W PFS2P42841 465 aaKnown RBP2.4□□□□□ -2.03
LOC1YFR001W CUE3P53137 624 aaKnown RBP2.4□□□□□ -2.03
LOC1YFR001W API2Q04413 109 aa2.4□□□□□ -2.03
LOC1YFR001W ARR1Q06596 294 aa2.4□□□□□ -2.03
LOC1YFR001W RPN6Q12377 434 aa2.4□□□□□ -2.03
LOC1YFR001W AUS1Q08409 1394 aa2.39□□□□□ -2.03
LOC1YFR001W ERG9P29704 444 aa2.39□□□□□ -2.03
LOC1YFR001W ZIP1P31111 875 aa2.39□□□□□ -2.03
LOC1YFR001W TPS2P31688 896 aaKnown RBP2.39□□□□□ -2.03
LOC1YFR001W TIP20P33891 701 aa2.39□□□□□ -2.03
LOC1YFR001W PCH2P38126 564 aa2.39□□□□□ -2.03
LOC1YFR001W PEX32P38292 413 aa2.39□□□□□ -2.03
LOC1YFR001W ALP1P38971 573 aa2.39□□□□□ -2.03
LOC1YFR001W PML1Q07930 204 aaPredicted RBP2.39□□□□□ -2.03
LOC1YFR001W YOL029CQ08187 201 aa2.39□□□□□ -2.03
LOC1YFR001W MMT2Q08970 484 aa2.39□□□□□ -2.03
LOC1YFR001W TAF10Q12030 206 aa2.39□□□□□ -2.03
LOC1YFR001W PRM7Q12459 698 aa2.39□□□□□ -2.03
LOC1YFR001W TAL1P15019 335 aaKnown RBP2.38□□□□□ -2.03
LOC1YFR001W FUS3P16892 353 aaKnown RBP2.38□□□□□ -2.03
LOC1YFR001W SWI3P32591 825 aa2.38□□□□□ -2.03
LOC1YFR001W CYM1P32898 989 aa2.38□□□□□ -2.03
LOC1YFR001W IML3P38265 245 aa2.38□□□□□ -2.03
LOC1YFR001W MMS21P38632 267 aa2.38□□□□□ -2.03
LOC1YFR001W FRT2P39734 528 aa2.38□□□□□ -2.03
LOC1YFR001W HST4P53688 370 aa2.38□□□□□ -2.03
LOC1YFR001W PRM1P53835 661 aa2.38□□□□□ -2.03
LOC1YFR001W SLF1Q12034 447 aaKnown RBP2.38□□□□□ -2.03
LOC1YFR001W YLL053CP0CD98 152 aa2.37□□□□□ -2.03
LOC1YFR001W RAD23P32628 398 aaKnown RBP2.37□□□□□ -2.03
LOC1YFR001W BLI1P35727 113 aa2.37□□□□□ -2.03
LOC1YFR001W YKL071WP36086 256 aa2.37□□□□□ -2.03
LOC1YFR001W PRY2P36110 329 aa2.37□□□□□ -2.03
LOC1YFR001W FRM2P37261 193 aa2.37□□□□□ -2.03
LOC1YFR001W TAE1P38340 232 aa2.37□□□□□ -2.03
LOC1YFR001W YFR018CP43599 363 aa2.37□□□□□ -2.03
LOC1YFR001W RRB1Q04225 511 aaKnown RBP2.37□□□□□ -2.03
LOC1YFR001W MRX8Q05473 314 aa2.37□□□□□ -2.03
LOC1YFR001W RPN8Q08723 338 aaKnown RBP2.37□□□□□ -2.03
LOC1YFR001W YDR018CQ12185 396 aa2.37□□□□□ -2.03
LOC1YFR001W PSY3Q12318 242 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms