RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SWI1P09547 1314 aa1.07□□□□□ -2.24
YCK3YER123W IPP1P00817 287 aaKnown RBP1.07□□□□□ -2.24
YCK3YER123W SSC1P0CS90 654 aaKnown RBP1.07□□□□□ -2.24
YCK3YER123W ASP3-2P0CX77 362 aa1.07□□□□□ -2.24
YCK3YER123W ASP3-3P0CX78 362 aa1.07□□□□□ -2.24
YCK3YER123W ASP3-4P0CX79 362 aa1.07□□□□□ -2.24
YCK3YER123W ASP3-1P0CZ17 362 aa1.07□□□□□ -2.24
YCK3YER123W POX1P13711 748 aa1.07□□□□□ -2.24
YCK3YER123W ALG1P16661 449 aa1.07□□□□□ -2.24
YCK3YER123W GIT1P25346 518 aa1.07□□□□□ -2.24
YCK3YER123W SKN1P33336 771 aa1.07□□□□□ -2.24
YCK3YER123W PRY2P36110 329 aa1.07□□□□□ -2.24
YCK3YER123W HEL1P36113 551 aa1.07□□□□□ -2.24
YCK3YER123W ECM8P38246 354 aa1.07□□□□□ -2.24
YCK3YER123W LSM12P38828 187 aaKnown RBP1.07□□□□□ -2.24
YCK3YER123W TRM112P53738 135 aaPredicted RBP1.07□□□□□ -2.24
YCK3YER123W SPR6Q01684 191 aa1.07□□□□□ -2.24
YCK3YER123W TSR2Q06672 205 aaKnown RBP1.07□□□□□ -2.24
YCK3YER123W ALE1Q08548 619 aa1.07□□□□□ -2.24
YCK3YER123W RPP0P05317 312 aaKnown RBP1.06□□□□□ -2.24
YCK3YER123W CDC21P06785 304 aa1.06□□□□□ -2.24
YCK3YER123W YCR051WP25631 222 aa1.06□□□□□ -2.24
YCK3YER123W NFU1P32860 256 aa1.06□□□□□ -2.24
YCK3YER123W SKT5P34226 696 aa1.06□□□□□ -2.24
YCK3YER123W MPE1P35728 441 aaKnown RBP1.06□□□□□ -2.24
YCK3YER123W ASC1P38011 319 aaKnown RBP1.06□□□□□ -2.24
YCK3YER123W OLA1P38219 394 aaKnown RBP1.06□□□□□ -2.24
YCK3YER123W WSC4P38739 605 aa1.06□□□□□ -2.24
YCK3YER123W NDE1P40215 560 aa1.06□□□□□ -2.24
YCK3YER123W COQ5P49017 307 aa1.06□□□□□ -2.24
YCK3YER123W TOM22P49334 152 aa1.06□□□□□ -2.24
YCK3YER123W IRC4Q03036 179 aa1.06□□□□□ -2.24
YCK3YER123W YHC1Q05900 231 aaKnown RBP1.06□□□□□ -2.24
YCK3YER123W MMR1Q06324 491 aa1.06□□□□□ -2.24
YCK3YER123W SFI1Q12369 946 aa1.06□□□□□ -2.24
YCK3YER123W HMS1Q12398 434 aa1.06□□□□□ -2.24
YCK3YER123W APC2Q12440 853 aa1.06□□□□□ -2.24
YCK3YER123W AFI1Q99222 893 aa1.06□□□□□ -2.24
YCK3YER123W SSK22P25390 1331 aaPredicted RBP1.06□□□□□ -2.24
YCK3YER123W SPO23P33757 523 aa1.05□□□□□ -2.24
YCK3YER123W GPX2P38143 162 aa1.05□□□□□ -2.24
YCK3YER123W YBL028CP38202 106 aa1.05□□□□□ -2.24
YCK3YER123W SLM4P38247 162 aa1.05□□□□□ -2.24
YCK3YER123W INM1P38710 295 aa1.05□□□□□ -2.24
YCK3YER123W ECM34P38728 170 aa1.05□□□□□ -2.24
YCK3YER123W GPI16P38875 610 aa1.05□□□□□ -2.24
YCK3YER123W FHL1P39521 936 aa1.05□□□□□ -2.24
YCK3YER123W LSM4P40070 187 aaKnown RBP1.05□□□□□ -2.24
YCK3YER123W VHS2P40463 436 aa1.05□□□□□ -2.24
YCK3YER123W CAK1P43568 368 aaPredicted RBP1.05□□□□□ -2.24
YCK3YER123W TRF5P48561 642 aaKnown RBP1.05□□□□□ -2.24
YCK3YER123W REX2P54964 269 aaKnown RBP1.05□□□□□ -2.24
YCK3YER123W YDR115WQ04598 105 aa1.05□□□□□ -2.24
YCK3YER123W YIL046W-AQ3E7Z4 54 aa1.05□□□□□ -2.24
YCK3YER123W AGA2P32781 87 aa1.04□□□□□ -2.24
YCK3YER123W PDC2P32896 925 aa1.04□□□□□ -2.24
YCK3YER123W MCR1P36060 302 aaKnown RBP1.04□□□□□ -2.24
YCK3YER123W STN1P38960 494 aa1.04□□□□□ -2.24
YCK3YER123W YIR035CP40579 254 aa1.04□□□□□ -2.24
YCK3YER123W CPR7P47103 393 aa1.04□□□□□ -2.24
YCK3YER123W VEL1P53058 206 aa1.04□□□□□ -2.24
YCK3YER123W VAC7P53950 1165 aa1.04□□□□□ -2.24
YCK3YER123W SUR7P54003 302 aa1.04□□□□□ -2.24
YCK3YER123W PRP38Q00723 242 aaPredicted RBP1.04□□□□□ -2.24
YCK3YER123W YMR155WQ03795 547 aa1.04□□□□□ -2.24
YCK3YER123W YDR131CQ03899 556 aa1.04□□□□□ -2.24
YCK3YER123W MSC3Q05812 728 aa1.04□□□□□ -2.24
YCK3YER123W YLR287CQ05881 355 aa1.04□□□□□ -2.24
YCK3YER123W MCT1Q12283 360 aa1.04□□□□□ -2.24
YCK3YER123W LDB17Q12342 491 aa1.04□□□□□ -2.24
YCK3YER123W TPK3P05986 398 aa1.04□□□□□ -2.24
YCK3YER123W RPS18AP0CX55 146 aaKnown RBP1.04□□□□□ -2.24
YCK3YER123W RPS18BP0CX56 146 aaPredicted RBP1.04□□□□□ -2.24
YCK3YER123W EPT1P22140 391 aa1.04□□□□□ -2.24
YCK3YER123W ADK2P26364 225 aa1.04□□□□□ -2.24
YCK3YER123W ZIP1P31111 875 aa1.04□□□□□ -2.24
YCK3YER123W TOA1P32773 286 aa1.04□□□□□ -2.24
YCK3YER123W PTK1P36002 662 aaPredicted RBP1.04□□□□□ -2.24
YCK3YER123W GEP4P38812 185 aa1.04□□□□□ -2.24
YCK3YER123W SPO73P40031 143 aa1.04□□□□□ -2.24
YCK3YER123W KEG1P43614 200 aa1.04□□□□□ -2.24
YCK3YER123W SEH1P53011 349 aaKnown RBP1.04□□□□□ -2.24
YCK3YER123W RPN14P53196 417 aa1.04□□□□□ -2.24
YCK3YER123W HST4P53688 370 aa1.04□□□□□ -2.24
YCK3YER123W BNI5P53890 448 aaKnown RBP1.04□□□□□ -2.24
YCK3YER123W YMR010WQ03687 405 aa1.04□□□□□ -2.24
YCK3YER123W YLR177WQ06251 628 aa1.04□□□□□ -2.24
YCK3YER123W DDC1Q08949 612 aa1.04□□□□□ -2.24
YCK3YER123W SRO7Q12038 1033 aa1.04□□□□□ -2.24
YCK3YER123W VPS54Q12071 889 aa1.04□□□□□ -2.24
YCK3YER123W SFM1Q12314 213 aa1.04□□□□□ -2.24
YCK3YER123W SCM3Q12334 223 aa1.04□□□□□ -2.24
YCK3YER123W HIF1Q12373 385 aa1.04□□□□□ -2.24
YCK3YER123W YOP1Q12402 180 aa1.04□□□□□ -2.24
YCK3YER123W ARO3P14843 370 aaKnown RBP1.03□□□□□ -2.24
YCK3YER123W SLM5P25345 492 aaKnown RBP1.03□□□□□ -2.24
YCK3YER123W TIR2P33890 251 aa1.03□□□□□ -2.24
YCK3YER123W SMP1P38128 452 aa1.03□□□□□ -2.24
YCK3YER123W ZTA1P38230 334 aaKnown RBP1.03□□□□□ -2.24
YCK3YER123W MED6P38782 295 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 177.6 ms