RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C UNG1P12887 359 aa3.96□□□□□ -1.78
LSM6YDR378C NOP1P15646 327 aaKnown RBP3.96□□□□□ -1.78
LSM6YDR378C MYO3P36006 1272 aa3.96□□□□□ -1.78
LSM6YDR378C YBR241CP38142 488 aa3.96□□□□□ -1.78
LSM6YDR378C PEX32P38292 413 aa3.96□□□□□ -1.78
LSM6YDR378C PEX22P39718 180 aa3.96□□□□□ -1.78
LSM6YDR378C HEM14P40012 539 aa3.96□□□□□ -1.78
LSM6YDR378C AIM23P47015 356 aa3.96□□□□□ -1.78
LSM6YDR378C TRM82Q03774 444 aa3.96□□□□□ -1.78
LSM6YDR378C CSM3Q04659 317 aa3.96□□□□□ -1.78
LSM6YDR378C YDR262WQ12331 272 aa3.96□□□□□ -1.78
LSM6YDR378C ERG9P29704 444 aa3.95□□□□□ -1.78
LSM6YDR378C BTT1P40314 149 aaPredicted RBP3.95□□□□□ -1.78
LSM6YDR378C YPS5P53057 165 aa3.95□□□□□ -1.78
LSM6YDR378C VHT1P53241 593 aa3.95□□□□□ -1.78
LSM6YDR378C YDR115WQ04598 105 aa3.95□□□□□ -1.78
LSM6YDR378C REX3Q12090 404 aa3.95□□□□□ -1.78
LSM6YDR378C FRE8Q12209 686 aa3.95□□□□□ -1.78
LSM6YDR378C LDB17Q12342 491 aa3.95□□□□□ -1.78
LSM6YDR378C RPL21BQ12672 160 aaKnown RBP3.95□□□□□ -1.78
LSM6YDR378C ASP3-2P0CX77 362 aa3.94□□□□□ -1.78
LSM6YDR378C ASP3-3P0CX78 362 aa3.94□□□□□ -1.78
LSM6YDR378C ASP3-4P0CX79 362 aa3.94□□□□□ -1.78
LSM6YDR378C ASP3-1P0CZ17 362 aa3.94□□□□□ -1.78
LSM6YDR378C GAL3P13045 520 aa3.94□□□□□ -1.78
LSM6YDR378C VMA5P31412 392 aaKnown RBP3.94□□□□□ -1.78
LSM6YDR378C MOB2P43563 287 aa3.94□□□□□ -1.78
LSM6YDR378C NAS6P50086 228 aa3.94□□□□□ -1.78
LSM6YDR378C YGL262WP53054 175 aa3.94□□□□□ -1.78
LSM6YDR378C RNH201P53942 307 aa3.94□□□□□ -1.78
LSM6YDR378C BUR2Q05949 395 aa3.94□□□□□ -1.78
LSM6YDR378C MCH1Q07376 486 aa3.94□□□□□ -1.78
LSM6YDR378C RTC5Q12108 567 aaKnown RBP3.94□□□□□ -1.78
LSM6YDR378C DCC1P25559 380 aa3.93□□□□□ -1.78
LSM6YDR378C PMT2P31382 759 aa3.93□□□□□ -1.78
LSM6YDR378C PCH2P38126 564 aa3.93□□□□□ -1.78
LSM6YDR378C MRP21P38175 177 aa3.93□□□□□ -1.78
LSM6YDR378C RCK2P38623 610 aa3.93□□□□□ -1.78
LSM6YDR378C MMS21P38632 267 aa3.93□□□□□ -1.78
LSM6YDR378C ALD5P40047 520 aaKnown RBP3.93□□□□□ -1.78
LSM6YDR378C SEH1P53011 349 aaKnown RBP3.93□□□□□ -1.78
LSM6YDR378C LSG1P53145 640 aaKnown RBP3.93□□□□□ -1.78
LSM6YDR378C CDH1P53197 566 aa3.93□□□□□ -1.78
LSM6YDR378C TPS1Q00764 495 aaKnown RBP3.93□□□□□ -1.78
LSM6YDR378C SLM3Q12093 417 aa3.93□□□□□ -1.78
LSM6YDR378C SOD1P00445 154 aaKnown RBP3.92□□□□□ -1.78
LSM6YDR378C CDC37P06101 506 aaKnown RBP3.92□□□□□ -1.78
LSM6YDR378C RPS14AP06367 137 aaKnown RBP3.92□□□□□ -1.78
LSM6YDR378C URA10P30402 227 aa3.92□□□□□ -1.78
LSM6YDR378C TOA1P32773 286 aa3.92□□□□□ -1.78
LSM6YDR378C SUR1P33300 382 aa3.92□□□□□ -1.78
LSM6YDR378C RPS14BP39516 138 aaKnown RBP3.92□□□□□ -1.78
LSM6YDR378C YCH1P42937 148 aa3.92□□□□□ -1.78
LSM6YDR378C YGR015CP53208 328 aa3.92□□□□□ -1.78
LSM6YDR378C VHS1Q03785 461 aa3.92□□□□□ -1.78
LSM6YDR378C SRO7Q12038 1033 aa3.92□□□□□ -1.78
LSM6YDR378C CBP6P07253 162 aaPredicted RBP3.91□□□□□ -1.78
LSM6YDR378C RBK1P25332 333 aa3.91□□□□□ -1.78
LSM6YDR378C MID2P36027 376 aa3.91□□□□□ -1.78
LSM6YDR378C END3P39013 349 aa3.91□□□□□ -1.78
LSM6YDR378C STB1P42845 420 aa3.91□□□□□ -1.78
LSM6YDR378C YJR054WP47114 497 aa3.91□□□□□ -1.78
LSM6YDR378C BIO3P50277 480 aa3.91□□□□□ -1.78
LSM6YDR378C TAF6P53040 516 aa3.91□□□□□ -1.78
LSM6YDR378C HCH1P53834 153 aa3.91□□□□□ -1.78
LSM6YDR378C DDC1Q08949 612 aa3.91□□□□□ -1.78
LSM6YDR378C RPL18AP0CX49 186 aaKnown RBP3.9□□□□□ -1.79
LSM6YDR378C RPL18BP0CX50 186 aaKnown RBP3.9□□□□□ -1.79
LSM6YDR378C ITR2P30606 609 aa3.9□□□□□ -1.79
LSM6YDR378C YDR089WP38966 869 aa3.9□□□□□ -1.79
LSM6YDR378C SSO2P39926 295 aa3.9□□□□□ -1.79
LSM6YDR378C OSW5P40219 148 aa3.9□□□□□ -1.79
LSM6YDR378C PXR1P53335 271 aaPredicted RBP3.9□□□□□ -1.79
LSM6YDR378C SUR7P54003 302 aa3.9□□□□□ -1.79
LSM6YDR378C PRO2P54885 456 aaKnown RBP3.9□□□□□ -1.79
LSM6YDR378C RPL21AQ02753 160 aaKnown RBP3.9□□□□□ -1.79
LSM6YDR378C RVB1Q03940 463 aaKnown RBP3.9□□□□□ -1.79
LSM6YDR378C VPS20Q04272 221 aa3.9□□□□□ -1.79
LSM6YDR378C YLR297WQ05899 129 aa3.9□□□□□ -1.79
LSM6YDR378C ALE1Q08548 619 aa3.9□□□□□ -1.79
LSM6YDR378C PET18P25362 215 aa3.89□□□□□ -1.79
LSM6YDR378C ACB1P31787 87 aa3.89□□□□□ -1.79
LSM6YDR378C ECT1P33412 323 aa3.89□□□□□ -1.79
LSM6YDR378C YKL071WP36086 256 aa3.89□□□□□ -1.79
LSM6YDR378C MRPL27P36526 146 aaPredicted RBP3.89□□□□□ -1.79
LSM6YDR378C AIM20P40451 204 aa3.89□□□□□ -1.79
LSM6YDR378C PGU1P47180 361 aa3.89□□□□□ -1.79
LSM6YDR378C VEL1P53058 206 aa3.89□□□□□ -1.79
LSM6YDR378C YGR168CP53293 376 aa3.89□□□□□ -1.79
LSM6YDR378C RPN6Q12377 434 aa3.89□□□□□ -1.79
LSM6YDR378C CBP2P03874 630 aaPredicted RBP3.88□□□□□ -1.79
LSM6YDR378C YPS1P32329 569 aa3.88□□□□□ -1.79
LSM6YDR378C PDC2P32896 925 aa3.88□□□□□ -1.79
LSM6YDR378C SHE1P38200 338 aa3.88□□□□□ -1.79
LSM6YDR378C SHE3P38272 425 aaKnown RBP3.88□□□□□ -1.79
LSM6YDR378C MRX11Q03079 207 aa3.88□□□□□ -1.79
LSM6YDR378C STE23Q06010 1027 aa3.88□□□□□ -1.79
LSM6YDR378C YOR376WQ08900 122 aa3.88□□□□□ -1.79
LSM6YDR378C MDY2Q12285 212 aa3.88□□□□□ -1.79
LSM6YDR378C VPS63O13549 108 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms