RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C CIN1P40987 1014 aa6.4□□□□□ -1.38
TDP1YBR223C TIM54P47045 478 aa6.4□□□□□ -1.38
TDP1YBR223C AAD10P47182 288 aa6.4□□□□□ -1.38
TDP1YBR223C YGL101WP53144 215 aa6.4□□□□□ -1.38
TDP1YBR223C ART5P53244 586 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C PGA1P53896 198 aa6.4□□□□□ -1.38
TDP1YBR223C YPL113CQ02961 396 aa6.4□□□□□ -1.38
TDP1YBR223C YML096WQ04489 525 aa6.4□□□□□ -1.38
TDP1YBR223C ISR1Q06098 443 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C TPO3Q06451 622 aa6.4□□□□□ -1.38
TDP1YBR223C CDA2Q06703 312 aa6.4□□□□□ -1.38
TDP1YBR223C CRT10Q08226 957 aa6.4□□□□□ -1.38
TDP1YBR223C RTR2Q12378 196 aa6.4□□□□□ -1.38
TDP1YBR223C MTR10Q99189 972 aa6.4□□□□□ -1.38
TDP1YBR223C DPM1P14020 267 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C FUR1P18562 216 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C EXG1P23776 448 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C ZIM17P42844 174 aa6.39□□□□□ -1.39
TDP1YBR223C COQ5P49017 307 aa6.39□□□□□ -1.39
TDP1YBR223C RPL6AQ02326 176 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C RRP9Q06506 573 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C PIB1Q06651 286 aa6.39□□□□□ -1.39
TDP1YBR223C YNG1Q08465 219 aa6.39□□□□□ -1.39
TDP1YBR223C RAX1Q08760 435 aa6.39□□□□□ -1.39
TDP1YBR223C TIR4Q12218 487 aaPredicted RBP6.39□□□□□ -1.39
TDP1YBR223C AI4P03878 556 aa6.39□□□□□ -1.39
TDP1YBR223C HIS5P07172 385 aa6.39□□□□□ -1.39
TDP1YBR223C SEN2P16658 377 aa6.39□□□□□ -1.39
TDP1YBR223C SFA1P32771 386 aa6.39□□□□□ -1.39
TDP1YBR223C GLY1P37303 387 aaKnown RBP6.39□□□□□ -1.39
TDP1YBR223C PAU24P38155 120 aa6.39□□□□□ -1.39
TDP1YBR223C YCK3P39962 524 aa6.39□□□□□ -1.39
TDP1YBR223C YEL068CP39977 110 aa6.39□□□□□ -1.39
TDP1YBR223C SDP1P40479 209 aa6.39□□□□□ -1.39
TDP1YBR223C OYE3P41816 400 aaPredicted RBP6.39□□□□□ -1.39
TDP1YBR223C AAD14P42884 376 aa6.39□□□□□ -1.39
TDP1YBR223C PAM16P42949 149 aa6.39□□□□□ -1.39
TDP1YBR223C PAU12P53343 120 aa6.39□□□□□ -1.39
TDP1YBR223C MRPS16Q02608 121 aa6.39□□□□□ -1.39
TDP1YBR223C YDR541CQ03049 344 aa6.39□□□□□ -1.39
TDP1YBR223C PLB2Q03674 706 aa6.39□□□□□ -1.39
TDP1YBR223C ARV1Q06541 321 aa6.39□□□□□ -1.39
TDP1YBR223C ASR1Q06834 288 aa6.39□□□□□ -1.39
TDP1YBR223C MMT2Q08970 484 aa6.39□□□□□ -1.39
TDP1YBR223C ENV7Q12003 364 aa6.39□□□□□ -1.39
TDP1YBR223C APC2Q12440 853 aa6.39□□□□□ -1.39
TDP1YBR223C KIN28P06242 306 aa6.38□□□□□ -1.39
TDP1YBR223C HOM2P13663 365 aaKnown RBP6.38□□□□□ -1.39
TDP1YBR223C HOP1P20050 605 aa6.38□□□□□ -1.39
TDP1YBR223C BET2P20133 325 aa6.38□□□□□ -1.39
TDP1YBR223C RPA135P22138 1203 aaKnown RBP6.38□□□□□ -1.39
TDP1YBR223C CDC12P32468 407 aaKnown RBP6.38□□□□□ -1.39
TDP1YBR223C NIC96P34077 839 aa6.38□□□□□ -1.39
TDP1YBR223C YKL097CP34245 136 aa6.38□□□□□ -1.39
TDP1YBR223C ECM15P35195 104 aa6.38□□□□□ -1.39
TDP1YBR223C AUR1P36107 401 aaPredicted RBP6.38□□□□□ -1.39
TDP1YBR223C DTR1P38125 572 aa6.38□□□□□ -1.39
TDP1YBR223C CCZ1P38273 704 aa6.38□□□□□ -1.39
TDP1YBR223C ALP1P38971 573 aa6.38□□□□□ -1.39
TDP1YBR223C IDS2P46958 469 aa6.38□□□□□ -1.39
TDP1YBR223C SNX4P47057 423 aa6.38□□□□□ -1.39
TDP1YBR223C SAM37P50110 327 aa6.38□□□□□ -1.39
TDP1YBR223C PMT5P52867 743 aa6.38□□□□□ -1.39
TDP1YBR223C PPT1P53043 513 aa6.38□□□□□ -1.39
TDP1YBR223C YNR061CP53747 219 aa6.38□□□□□ -1.39
TDP1YBR223C REC102Q02721 264 aa6.38□□□□□ -1.39
TDP1YBR223C RRN11Q04712 507 aa6.38□□□□□ -1.39
TDP1YBR223C MRPL35Q06678 367 aa6.38□□□□□ -1.39
TDP1YBR223C YOR289WQ12012 251 aaPredicted RBP6.38□□□□□ -1.39
TDP1YBR223C YDL211CQ12121 372 aa6.38□□□□□ -1.39
TDP1YBR223C YOR214CQ12282 236 aa6.38□□□□□ -1.39
TDP1YBR223C YGR161W-CQ3E744 92 aa6.38□□□□□ -1.39
TDP1YBR223C GCN4P03069 281 aa6.37□□□□□ -1.39
TDP1YBR223C GAL7P08431 366 aa6.37□□□□□ -1.39
TDP1YBR223C STE12P13574 688 aa6.37□□□□□ -1.39
TDP1YBR223C YCR102CP25608 368 aa6.37□□□□□ -1.39
TDP1YBR223C KRE6P32486 720 aa6.37□□□□□ -1.39
TDP1YBR223C SRB5P32585 307 aa6.37□□□□□ -1.39
TDP1YBR223C ANR2P36090 516 aaPredicted RBP6.37□□□□□ -1.39
TDP1YBR223C MRPL3P36516 390 aa6.37□□□□□ -1.39
TDP1YBR223C THI2P38141 450 aa6.37□□□□□ -1.39
TDP1YBR223C PHM8P40025 321 aa6.37□□□□□ -1.39
TDP1YBR223C YER137CP40083 148 aaKnown RBP6.37□□□□□ -1.39
TDP1YBR223C RPE1P46969 238 aa6.37□□□□□ -1.39
TDP1YBR223C ATH1P48016 1211 aa6.37□□□□□ -1.39
TDP1YBR223C FHN1P53279 174 aa6.37□□□□□ -1.39
TDP1YBR223C RHO3Q00245 231 aaKnown RBP6.37□□□□□ -1.39
TDP1YBR223C SPC19Q03954 165 aa6.37□□□□□ -1.39
TDP1YBR223C ATG41Q12048 136 aa6.37□□□□□ -1.39
TDP1YBR223C MMP1Q12372 583 aa6.37□□□□□ -1.39
TDP1YBR223C ATG31Q12421 196 aa6.37□□□□□ -1.39
TDP1YBR223C FMP16Q12497 93 aa6.37□□□□□ -1.39
TDP1YBR223C HIS3P06633 220 aa6.36□□□□□ -1.39
TDP1YBR223C NCP1P16603 691 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C AAC3P18238 307 aa6.36□□□□□ -1.39
TDP1YBR223C ITR1P30605 584 aa6.36□□□□□ -1.39
TDP1YBR223C PRE4P30657 266 aa6.36□□□□□ -1.39
TDP1YBR223C DOA4P32571 926 aa6.36□□□□□ -1.39
TDP1YBR223C YEF1P32622 495 aa6.36□□□□□ -1.39
TDP1YBR223C ECT1P33412 323 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms