RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	CUR1	Q06469	252 aa		4.95	□□□□□ -1.62
CDS1	YBR029C	YLH47	Q06493	454 aa		4.95	□□□□□ -1.62
CDS1	YBR029C	ERV2	Q12284	196 aa		4.95	□□□□□ -1.62
CDS1	YBR029C	BUD3	P25558	1636 aa		4.95	□□□□□ -1.62
CDS1	YBR029C	CPR3	P25719	182 aa		4.94	□□□□□ -1.62
CDS1	YBR029C	VMA5	P31412	392 aa	Known RBP	4.94	□□□□□ -1.62
CDS1	YBR029C	ZUO1	P32527	433 aa	Known RBP	4.94	□□□□□ -1.62
CDS1	YBR029C	MEP2	P41948	499 aa		4.94	□□□□□ -1.62
CDS1	YBR029C	TRF5	P48561	642 aa	Known RBP	4.94	□□□□□ -1.62
CDS1	YBR029C	EGD1	Q02642	157 aa	Known RBP	4.94	□□□□□ -1.62
CDS1	YBR029C	HRI1	Q05905	244 aa	Known RBP	4.94	□□□□□ -1.62
CDS1	YBR029C	YPR091C	Q06833	770 aa		4.94	□□□□□ -1.62
CDS1	YBR029C	FCY22	Q12119	530 aa		4.94	□□□□□ -1.62
CDS1	YBR029C	RPL18A	P0CX49	186 aa	Known RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	RPL18B	P0CX50	186 aa	Known RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	MSI1	P13712	422 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	PUT4	P15380	627 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	DBP3	P20447	523 aa	Known RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	ARO2	P28777	376 aa	Known RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	YPS1	P32329	569 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	MYO3	P36006	1272 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	YAP3	P38749	330 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	BTT1	P40314	149 aa	Predicted RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	KEG1	P43614	200 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	YJR030C	P47101	745 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	VOA1	P53262	265 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	DET1	Q99288	334 aa	Known RBP	4.93	□□□□□ -1.62
CDS1	YBR029C	YBT1	P32386	1661 aa		4.93	□□□□□ -1.62
CDS1	YBR029C	RPS8A	P0CX39	200 aa	Known RBP	4.92	□□□□□ -1.62
CDS1	YBR029C	RPS8B	P0CX40	200 aa	Known RBP	4.92	□□□□□ -1.62
CDS1	YBR029C	PET123	P17558	318 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	SAR1	P20606	190 aa	Known RBP	4.92	□□□□□ -1.62
CDS1	YBR029C	FAR1	P21268	830 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	YFR057W	P43625	151 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	YJR085C	P47131	105 aa	Known RBP	4.92	□□□□□ -1.62
CDS1	YBR029C	RIF2	Q06208	395 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	YLR413W	Q06689	675 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	YDL114W	Q07530	308 aa		4.92	□□□□□ -1.62
CDS1	YBR029C	UTR1	P21373	530 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	RPL16A	P26784	199 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	IST2	P38250	946 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	IML3	P38265	245 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	PEX32	P38292	413 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	YPT35	P38815	214 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	ATG7	P38862	630 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	PAN6	P40459	309 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	MPP10	P47083	593 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	MST27	P53176	234 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	CLD1	P53264	445 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	YGR168C	P53293	376 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	CWC22	P53333	577 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	BOR1	P53838	576 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	IRC25	Q07951	179 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	TMS1	Q12116	473 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	CAT8	P39113	1433 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	PHO2	P07269	559 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	RPB5	P20434	215 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	SPO23	P33757	523 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	YNL208W	P40159	199 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	UTP25	P40498	721 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	REE1	P40893	198 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	RVB1	Q03940	463 aa	Known RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	JID1	Q12350	301 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	HMS1	Q12398	434 aa		4.91	□□□□□ -1.62
CDS1	YBR029C	DCP1	Q12517	231 aa	Predicted RBP	4.91	□□□□□ -1.62
CDS1	YBR029C	SUP35	P05453	685 aa	Known RBP	4.9	□□□□□ -1.63
CDS1	YBR029C	OM45	P16547	393 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	NAM9	P27929	486 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	MKK1	P32490	508 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	CSE2	P33308	149 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	YKR015C	P36111	568 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	NAS6	P50086	228 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	RIB4	P50861	169 aa	Predicted RBP	4.9	□□□□□ -1.63
CDS1	YBR029C	REX2	P54964	269 aa	Known RBP	4.9	□□□□□ -1.63
CDS1	YBR029C	UBA3	Q99344	299 aa		4.9	□□□□□ -1.63
CDS1	YBR029C	RAD1	P06777	1100 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	PPQ1	P32945	549 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	BUD2	P33314	1104 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	AVT5	P38176	459 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	TAF6	P53040	516 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	DBP6	P53734	629 aa	Known RBP	4.89	□□□□□ -1.63
CDS1	YBR029C	IMP4	P53941	290 aa	Known RBP	4.89	□□□□□ -1.63
CDS1	YBR029C	VAC14	Q06708	880 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	PAA1	Q12447	191 aa	Known RBP	4.89	□□□□□ -1.63
CDS1	YBR029C	YPR1	Q12458	312 aa		4.89	□□□□□ -1.63
CDS1	YBR029C	MRPL23	Q12487	163 aa	Predicted RBP	4.89	□□□□□ -1.63
CDS1	YBR029C	RPS18A	P0CX55	146 aa	Known RBP	4.88	□□□□□ -1.63
CDS1	YBR029C	RPS18B	P0CX56	146 aa	Predicted RBP	4.88	□□□□□ -1.63
CDS1	YBR029C	CBS2	P14905	389 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	FUN26	P31381	517 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	LOH1	P47055	219 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	BIR1	P47134	954 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	PNC1	P53184	216 aa	Known RBP	4.88	□□□□□ -1.63
CDS1	YBR029C	RRG8	Q06109	277 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	CMS1	Q07897	291 aa	Known RBP	4.88	□□□□□ -1.63
CDS1	YBR029C	SLF1	Q12034	447 aa	Known RBP	4.88	□□□□□ -1.63
CDS1	YBR029C	YDL199C	Q12407	687 aa		4.88	□□□□□ -1.63
CDS1	YBR029C	SRB8	P25648	1427 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	UGA1	P17649	471 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	RBK1	P25332	333 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms