RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 M0QZ92 97 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 NEMFO60524 1076 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 CXCL10P02778 98 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 KLRC1P26715 233 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 KCNJ6P48051 423 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 PRKCEQ02156 737 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 TRAF7Q6Q0C0 670 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 RPAINQ86UA6 219 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.65□□□□□ -0.54
SDF2-208ENST00000589788 PCDHA2Q9Y5H9 948 aa11.65□□□□□ -0.54
SDF2-208ENST00000589788 RANBP2P49792 3224 aaKnown RBP11.65□□□□□ -0.54
SDF2-208ENST00000589788 FBXO45P0C2W1 286 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 ATP2A2P16615 1042 aaKnown RBP11.64□□□□□ -0.55
SDF2-208ENST00000589788 ATP4AP20648 1035 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 GJB2P29033 226 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 IKBKEQ14164 716 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 MBTPS1Q14703 1052 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 GPNMBQ14956 572 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 CALCRLQ16602 461 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 UGCGQ16739 394 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 IER5Q5VY09 327 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
SDF2-208ENST00000589788 MTHFD1LQ6UB35 978 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 NOSTRINQ8IVI9 506 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 DEFB123Q8N688 67 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 SEPT8Q92599 483 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 ZNF516Q92618 1163 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 HAS1Q92839 578 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 SNX21Q969T3 373 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 ZBTB10Q96DT7 871 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 SLC9A7Q96T83 725 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
SDF2-208ENST00000589788 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
SDF2-208ENST00000589788 SMIM35A0A1B0GVV1 85 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 ABHD14A-ACY1A0A1B0GW23 586 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 GRXCR1A8MXD5 290 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 H3BQV1 296 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 ZNF862O60290 1169 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 DKC1O60832 514 aaKnown RBP eCLIP11.63□□□□□ -0.55
SDF2-208ENST00000589788 EFCAB14O75071 495 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 MCM7P33993 719 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 PTPN5P54829 565 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 PSMC5P62195 406 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 MRPS6P82932 125 aaKnown RBP11.63□□□□□ -0.55
SDF2-208ENST00000589788 RAB30Q15771 203 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 NCAPH2Q6IBW4 605 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 B3GNT9Q6UX72 402 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 Q7L0L9 218 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 NME8Q8N427 588 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 METTL13Q8N6R0 699 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 TIFAQ96CG3 184 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 VAV3Q9UKW4 847 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 CDY2AQ9Y6F7 541 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 EVPLQ92817 2033 aa11.63□□□□□ -0.55
SDF2-208ENST00000589788 ZBTB42B2RXF5 422 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 EML1O00423 815 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 MAGEB2O15479 319 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 C22orf31O95567 290 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 CHRNA1P02708 482 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 GHRP10912 638 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 TXKP42681 527 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 QARSP47897 775 aaKnown RBP11.62□□□□□ -0.55
SDF2-208ENST00000589788 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 NR1H3Q13133 447 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 PLEKHG4Q58EX7 1191 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 XKR3Q5GH77 459 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 TTC38Q5R3I4 469 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 DBF4BQ8NFT6 615 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 PHOSPHO2Q8TCD6 241 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 IFIH1Q9BYX4 1025 aaKnown RBP11.62□□□□□ -0.55
SDF2-208ENST00000589788 TRPV2Q9Y5S1 764 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 GBF1Q92538 1859 aa11.62□□□□□ -0.55
SDF2-208ENST00000589788 TMEM265A0A087WTH1 108 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 WNT7AO00755 349 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 P4HBP07237 508 aaKnown RBP11.61□□□□□ -0.55
SDF2-208ENST00000589788 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
SDF2-208ENST00000589788 TMOD1P28289 359 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 SOX11P35716 441 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 RABGGTBP53611 331 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
SDF2-208ENST00000589788 MGAT3Q09327 533 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 TBC1D8BQ0IIM8 1120 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 KCNH2Q12809 1159 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 ORC2Q13416 577 aaPredicted RBP11.61□□□□□ -0.55
SDF2-208ENST00000589788 EPHA7Q15375 998 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms