RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GIT1Q9Y2X7 761 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 COQ6Q9Y2Z9 468 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 TIMM13Q9Y5L4 95 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 FAM208AQ9UK61 1670 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 NFAT5O94916 1531 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 PTPDC1A2A3K4 754 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF891A8MT65 544 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 H7BY64 318 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 FGF10O15520 208 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NPHS1O60500 1241 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 LEFTY1O75610 366 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PRKD3O94806 890 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SYPP08247 313 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 DNM2P50570 870 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MECP2P51608 486 aaKnown RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 LACTBP83111 547 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPIRE1Q08AE8 756 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MINDY4Q4G0A6 757 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMEM240Q5SV17 173 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 GPR158Q5T848 1215 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PPP4R4Q6NUP7 873 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 FAM214BQ7L5A3 538 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 OTOP1Q7RTM1 612 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 HDGFL2Q7Z4V5 671 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 AMOTL1Q8IY63 956 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZZZ3Q8IYH5 903 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ARMC10Q8N2F6 343 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NXPE1Q8N323 547 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 JPH3Q8WXH2 748 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SSH1Q8WYL5 1049 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PIGBQ92521 554 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PMM1Q92871 262 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PTCHD1Q96NR3 888 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 RPS6KC1Q96S38 1066 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NUP88Q99567 741 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MCMBPQ9BTE3 642 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC8Q9H0W5 538 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ARNT2Q9HBZ2 717 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 CATSPERZQ9NTU4 200 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDHA2Q9Y5H9 948 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC12A8A0AV02 714 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 WDR64B1ANS9 1081 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ERC2O15083 957 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 HIP1RO75146 1068 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 LSP1P33241 339 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CYP2C19P33261 490 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ID4P47928 161 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PHC1P78364 1004 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 GTF2H3Q13889 308 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 OVCH1Q7RTY7 1134 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 DGKHQ86XP1 1220 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC103Q8IW40 242 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 RCBTB1Q8NDN9 531 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 COG1Q8WTW3 980 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 FUBP3Q96I24 572 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CHAMP1Q96JM3 812 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 DUSP15Q9H1R2 295 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 GBA2Q9HCG7 927 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 RCAN3Q9UKA8 241 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 LUC7L2Q9Y383 392 aaKnown RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDH11XQ9BZA7 1347 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDH11YQ9BZA8 1340 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 USP42Q9H9J4 1324 aaKnown RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ATRXP46100 2492 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLX4Q8IY92 1834 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 NPHP1O15259 732 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 GSC2O15499 205 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAFKO60675 156 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RPS6KA4O75676 772 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MYBL2P10244 700 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ATP2A2P16615 1042 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ERVK-21P61565 698 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 PURAQ00577 322 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 LRRC41Q15345 812 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 CHTF18Q8WVB6 975 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RAPGEF4Q8WZA2 1011 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 HEXIM2Q96MH2 286 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 GUCD1Q96NT3 240 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 CDADC1Q9BWV3 514 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 IPPKQ9H8X2 491 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMOD3Q9NYL9 352 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 STOML1Q9UBI4 398 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 DUSP13Q9UII6 198 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ASAP1Q9ULH1 1129 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 COA3Q9Y2R0 106 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPO11Q9Y5K1 396 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SNX11Q9Y5W9 270 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADGRB1O14514 1584 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TNKSO95271 1327 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ROCK1Q13464 1354 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RGPD2P0DJD1 1756 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms