RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J YHR219WP38900 624 aa4.99□□□□□ -1.61
HSX1tR(CCU)J AST2P39945 430 aaKnown RBP4.99□□□□□ -1.61
HSX1tR(CCU)J SPO73P40031 143 aa4.99□□□□□ -1.61
HSX1tR(CCU)J PRE6P40303 254 aaKnown RBP4.99□□□□□ -1.61
HSX1tR(CCU)J SOK1P40317 901 aa4.99□□□□□ -1.61
HSX1tR(CCU)J SNL1P40548 159 aa4.99□□□□□ -1.61
HSX1tR(CCU)J CAK1P43568 368 aaPredicted RBP4.99□□□□□ -1.61
HSX1tR(CCU)J ECO1P43605 281 aa4.99□□□□□ -1.61
HSX1tR(CCU)J RPE1P46969 238 aa4.99□□□□□ -1.61
HSX1tR(CCU)J PGU1P47180 361 aa4.99□□□□□ -1.61
HSX1tR(CCU)J YGL260WP53056 76 aa4.99□□□□□ -1.61
HSX1tR(CCU)J SYF2P53277 215 aaPredicted RBP4.99□□□□□ -1.61
HSX1tR(CCU)J MEP3P53390 489 aa4.99□□□□□ -1.61
HSX1tR(CCU)J SEC13Q04491 297 aaKnown RBP4.99□□□□□ -1.61
HSX1tR(CCU)J CDA2Q06703 312 aa4.99□□□□□ -1.61
HSX1tR(CCU)J MEU1Q07938 337 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
HSX1tR(CCU)J NOP12Q08208 459 aaKnown RBP4.99□□□□□ -1.61
HSX1tR(CCU)J CRT10Q08226 957 aa4.99□□□□□ -1.61
HSX1tR(CCU)J RRG7Q08774 242 aaPredicted RBP4.99□□□□□ -1.61
HSX1tR(CCU)J VIK1Q12045 647 aa4.99□□□□□ -1.61
HSX1tR(CCU)J NFI1Q12216 726 aa4.99□□□□□ -1.61
HSX1tR(CCU)J TAF3Q12297 353 aa4.99□□□□□ -1.61
HSX1tR(CCU)J NPC2Q12408 173 aa4.99□□□□□ -1.61
HSX1tR(CCU)J ATR1P13090 542 aa4.98□□□□□ -1.61
HSX1tR(CCU)J FBA1P14540 359 aaKnown RBP4.98□□□□□ -1.61
HSX1tR(CCU)J RPB10P22139 70 aa4.98□□□□□ -1.61
HSX1tR(CCU)J CDC3P32457 520 aaKnown RBP4.98□□□□□ -1.61
HSX1tR(CCU)J SEC61P32915 480 aa4.98□□□□□ -1.61
HSX1tR(CCU)J TPO5P36029 618 aa4.98□□□□□ -1.61
HSX1tR(CCU)J SRO77P38163 1010 aa4.98□□□□□ -1.61
HSX1tR(CCU)J GRE3P38715 327 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
HSX1tR(CCU)J TAT2P38967 592 aa4.98□□□□□ -1.61
HSX1tR(CCU)J YJL193WP39542 402 aa4.98□□□□□ -1.61
HSX1tR(CCU)J THO1P40040 218 aaKnown RBP4.98□□□□□ -1.61
HSX1tR(CCU)J PHB1P40961 287 aa4.98□□□□□ -1.61
HSX1tR(CCU)J FAR7P43592 221 aa4.98□□□□□ -1.61
HSX1tR(CCU)J YFR054CP43622 192 aa4.98□□□□□ -1.61
HSX1tR(CCU)J UBX6P47049 396 aa4.98□□□□□ -1.61
HSX1tR(CCU)J BPL1P48445 690 aaPredicted RBP4.98□□□□□ -1.61
HSX1tR(CCU)J YGL235WP53071 178 aa4.98□□□□□ -1.61
HSX1tR(CCU)J PRM8P53174 237 aa4.98□□□□□ -1.61
HSX1tR(CCU)J PBP1P53297 722 aaKnown RBP4.98□□□□□ -1.61
HSX1tR(CCU)J RSN1Q03516 953 aa4.98□□□□□ -1.61
HSX1tR(CCU)J EKI1Q03764 534 aa4.98□□□□□ -1.61
HSX1tR(CCU)J YDR249CQ03787 373 aa4.98□□□□□ -1.61
HSX1tR(CCU)J SWA2Q06677 668 aa4.98□□□□□ -1.61
HSX1tR(CCU)J AVO1Q08236 1176 aa4.98□□□□□ -1.61
HSX1tR(CCU)J HNT3Q08702 217 aa4.98□□□□□ -1.61
HSX1tR(CCU)J RSA1Q08932 381 aa4.98□□□□□ -1.61
HSX1tR(CCU)J MCP1Q12106 302 aa4.98□□□□□ -1.61
HSX1tR(CCU)J PNS1Q12412 539 aa4.98□□□□□ -1.61
HSX1tR(CCU)J APC2Q12440 853 aa4.98□□□□□ -1.61
HSX1tR(CCU)J RIB3Q99258 208 aa4.98□□□□□ -1.61
HSX1tR(CCU)J DET1Q99288 334 aaKnown RBP4.98□□□□□ -1.61
HSX1tR(CCU)J SIR3P06701 978 aa4.97□□□□□ -1.61
HSX1tR(CCU)J ERD2P18414 219 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YCR100CP25606 316 aa4.97□□□□□ -1.61
HSX1tR(CCU)J EHD3P28817 500 aa4.97□□□□□ -1.61
HSX1tR(CCU)J PTP2P29461 750 aa4.97□□□□□ -1.61
HSX1tR(CCU)J SLM4P38247 162 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YEL057CP39983 233 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YNL208WP40159 199 aaKnown RBP4.97□□□□□ -1.61
HSX1tR(CCU)J LEM3P42838 414 aa4.97□□□□□ -1.61
HSX1tR(CCU)J BAT2P47176 376 aaKnown RBP4.97□□□□□ -1.61
HSX1tR(CCU)J DAM1P53267 343 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YGR168CP53293 376 aa4.97□□□□□ -1.61
HSX1tR(CCU)J PDR16P53860 351 aaKnown RBP4.97□□□□□ -1.61
HSX1tR(CCU)J YSA1Q01976 231 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YKR011CQ02209 353 aa4.97□□□□□ -1.61
HSX1tR(CCU)J SRP1Q02821 542 aaKnown RBP4.97□□□□□ -1.61
HSX1tR(CCU)J GIS1Q03833 894 aa4.97□□□□□ -1.61
HSX1tR(CCU)J BUR2Q05949 395 aa4.97□□□□□ -1.61
HSX1tR(CCU)J SYO1Q07395 620 aa4.97□□□□□ -1.61
HSX1tR(CCU)J ENB1Q08299 606 aa4.97□□□□□ -1.61
HSX1tR(CCU)J SKI7Q08491 747 aaPredicted RBP4.97□□□□□ -1.61
HSX1tR(CCU)J RDR1Q08904 546 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YPL272CQ08984 517 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YPR015CQ12531 247 aa4.97□□□□□ -1.61
HSX1tR(CCU)J DFG16Q99234 619 aa4.97□□□□□ -1.61
HSX1tR(CCU)J YHR214C-DP0CX93 97 aa4.96□□□□□ -1.62
HSX1tR(CCU)J RAD51P25454 400 aa4.96□□□□□ -1.62
HSX1tR(CCU)J UBC8P28263 218 aa4.96□□□□□ -1.62
HSX1tR(CCU)J RPC82P32349 654 aa4.96□□□□□ -1.62
HSX1tR(CCU)J HBS1P32769 611 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J TIM12P32830 109 aa4.96□□□□□ -1.62
HSX1tR(CCU)J MTC4P38335 694 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J YAR028WP39548 234 aa4.96□□□□□ -1.62
HSX1tR(CCU)J HXT9P40885 567 aa4.96□□□□□ -1.62
HSX1tR(CCU)J GCN20P43535 752 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J YJR098CP47139 656 aa4.96□□□□□ -1.62
HSX1tR(CCU)J YJR142WP47173 342 aa4.96□□□□□ -1.62
HSX1tR(CCU)J ECL1P48235 211 aa4.96□□□□□ -1.62
HSX1tR(CCU)J HXT11P54862 567 aa4.96□□□□□ -1.62
HSX1tR(CCU)J FDC1Q03034 503 aa4.96□□□□□ -1.62
HSX1tR(CCU)J YMR226CQ05016 267 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J YPR127WQ06494 345 aa4.96□□□□□ -1.62
HSX1tR(CCU)J DTD1Q07648 150 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J GRE1Q08969 168 aa4.96□□□□□ -1.62
HSX1tR(CCU)J YRA1Q12159 226 aaKnown RBP4.96□□□□□ -1.62
HSX1tR(CCU)J YLR126CQ12288 251 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms