RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W MTC2P34246 357 aa3.5□□□□□ -1.85
SWI1YPL016W ATG8P38182 117 aaRIP-Chip data3.5□□□□□ -1.85not detected
SWI1YPL016W SEN34P39707 275 aa3.5□□□□□ -1.85
SWI1YPL016W PUG1P40100 303 aa3.5□□□□□ -1.85
SWI1YPL016W IBA57P47158 497 aa3.5□□□□□ -1.85
SWI1YPL016W TRS31Q03337 283 aa3.5□□□□□ -1.85
SWI1YPL016W EKI1Q03764 534 aa3.5□□□□□ -1.85
SWI1YPL016W CTK1Q03957 528 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W HRD3Q05787 833 aa3.5□□□□□ -1.85
SWI1YPL016W YLR108CQ12259 485 aa3.5□□□□□ -1.85
SWI1YPL016W YIL134C-AQ45U18 67 aa3.5□□□□□ -1.85
SWI1YPL016W YPL229WQ99395 206 aa3.5□□□□□ -1.85
SWI1YPL016W CBP1P07252 654 aa3.49□□□□□ -1.85
SWI1YPL016W SLY1P22213 666 aa3.49□□□□□ -1.85
SWI1YPL016W RBK1P25332 333 aa3.49□□□□□ -1.85
SWI1YPL016W RAD54P32863 898 aa3.49□□□□□ -1.85
SWI1YPL016W BIG1P38813 335 aa3.49□□□□□ -1.85
SWI1YPL016W MNL1P38888 796 aa3.49□□□□□ -1.85
SWI1YPL016W FKH2P41813 862 aa3.49□□□□□ -1.85
SWI1YPL016W CSN12P47130 423 aa3.49□□□□□ -1.85
SWI1YPL016W RPS15Q01855 142 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W GPI11Q06636 219 aa3.49□□□□□ -1.85
SWI1YPL016W REX4Q08237 289 aa3.49□□□□□ -1.85
SWI1YPL016W PST2Q12335 198 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W COX2P00410 251 aa3.49□□□□□ -1.85
SWI1YPL016W PAB1P04147 577 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SWI1YPL016W DDI2P0CH63 225 aa3.49□□□□□ -1.85
SWI1YPL016W DDI3P0CH64 225 aa3.49□□□□□ -1.85
SWI1YPL016W ART10P18634 518 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W VBA3P25594 458 aa3.49□□□□□ -1.85
SWI1YPL016W ISC10P32645 267 aa3.49□□□□□ -1.85
SWI1YPL016W CPR5P35176 225 aa3.49□□□□□ -1.85
SWI1YPL016W SHM2P37291 469 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W SDH4P37298 181 aa3.49□□□□□ -1.85
SWI1YPL016W MRPS9P38120 278 aa3.49□□□□□ -1.85
SWI1YPL016W PTI1P39927 425 aaPredicted RBP3.49□□□□□ -1.85
SWI1YPL016W MMF1P40185 145 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W FAR3P46671 204 aa3.49□□□□□ -1.85
SWI1YPL016W GLG2P47011 380 aa3.49□□□□□ -1.85
SWI1YPL016W MCM22P47167 239 aa3.49□□□□□ -1.85
SWI1YPL016W AIF1P52923 378 aa3.49□□□□□ -1.85
SWI1YPL016W YGR151CP53287 111 aa3.49□□□□□ -1.85
SWI1YPL016W YNR066CP53752 436 aa3.49□□□□□ -1.85
SWI1YPL016W CUS2P53830 285 aaPredicted RBP3.49□□□□□ -1.85
SWI1YPL016W YKR011CQ02209 353 aa3.49□□□□□ -1.85
SWI1YPL016W YPL107WQ02873 248 aa3.49□□□□□ -1.85
SWI1YPL016W ERO1Q03103 563 aa3.49□□□□□ -1.85
SWI1YPL016W RRT8Q08219 342 aa3.49□□□□□ -1.85
SWI1YPL016W NSL1Q12143 216 aa3.49□□□□□ -1.85
SWI1YPL016W HAT1Q12341 374 aa3.49□□□□□ -1.85
SWI1YPL016W HSP26P15992 214 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SWI1YPL016W SNC2P33328 115 aa3.49□□□□□ -1.85
SWI1YPL016W MUP3P38734 546 aa3.49□□□□□ -1.85
SWI1YPL016W SMB1P40018 196 aaKnown RBP3.49□□□□□ -1.85
SWI1YPL016W MPM1P40364 252 aa3.49□□□□□ -1.85
SWI1YPL016W YJR154WP47181 346 aa3.49□□□□□ -1.85
SWI1YPL016W EMI1Q04406 187 aa3.49□□□□□ -1.85
SWI1YPL016W HSP31Q04432 237 aa3.49□□□□□ -1.85
SWI1YPL016W CSI2Q08054 341 aa3.49□□□□□ -1.85
SWI1YPL016W YLR049CQ12110 428 aa3.49□□□□□ -1.85
SWI1YPL016W YDR018CQ12185 396 aa3.49□□□□□ -1.85
SWI1YPL016W SPT3P06844 337 aa3.48□□□□□ -1.85
SWI1YPL016W RNR1P21524 888 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W MCM10P32354 571 aa3.48□□□□□ -1.85
SWI1YPL016W NTF2P33331 125 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W SRP102P36057 244 aaPredicted RBP3.48□□□□□ -1.85
SWI1YPL016W BDH1P39714 382 aa3.48□□□□□ -1.85
SWI1YPL016W FIR1P40020 876 aa3.48□□□□□ -1.85
SWI1YPL016W UTP25P40498 721 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W MET28P40573 187 aa3.48□□□□□ -1.85
SWI1YPL016W YJR012CP47087 207 aa3.48□□□□□ -1.85
SWI1YPL016W AIM25P47140 327 aa3.48□□□□□ -1.85
SWI1YPL016W HLJ1P48353 224 aa3.48□□□□□ -1.85
SWI1YPL016W HCH1P53834 153 aa3.48□□□□□ -1.85
SWI1YPL016W MDM30Q05930 598 aa3.48□□□□□ -1.85
SWI1YPL016W PEX30Q06169 523 aa3.48□□□□□ -1.85
SWI1YPL016W LDB18Q07887 179 aa3.48□□□□□ -1.85
SWI1YPL016W TMS1Q12116 473 aa3.48□□□□□ -1.85
SWI1YPL016W WTM1Q12363 437 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W SRB2P34162 210 aa3.48□□□□□ -1.85
SWI1YPL016W YKL151CP36059 337 aa3.48□□□□□ -1.85
SWI1YPL016W DRE2P36152 348 aa3.48□□□□□ -1.85
SWI1YPL016W YBL029WP38201 376 aa3.48□□□□□ -1.85
SWI1YPL016W YHR054CP38780 354 aa3.48□□□□□ -1.85
SWI1YPL016W RSC30P38781 883 aa3.48□□□□□ -1.85
SWI1YPL016W ASN1P49089 572 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W PNC1P53184 216 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W GTF1P53260 183 aaPredicted RBP3.48□□□□□ -1.85
SWI1YPL016W YGR168CP53293 376 aa3.48□□□□□ -1.85
SWI1YPL016W SMX3P54999 86 aaPredicted RBP3.48□□□□□ -1.85
SWI1YPL016W ADI1Q03677 179 aa3.48□□□□□ -1.85
SWI1YPL016W YMR253CQ04835 414 aa3.48□□□□□ -1.85
SWI1YPL016W YLR036CQ07986 203 aa3.48□□□□□ -1.85
SWI1YPL016W HRD1Q08109 551 aa3.48□□□□□ -1.85
SWI1YPL016W MSC6Q08818 692 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W DIN7Q12086 430 aa3.48□□□□□ -1.85
SWI1YPL016W AHC1Q12433 566 aa3.48□□□□□ -1.85
SWI1YPL016W ZPS1Q12512 249 aa3.48□□□□□ -1.85
SWI1YPL016W RPL8AP17076 256 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W YCK2P23292 546 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms