RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W PFA5Q03289 374 aa8.68□□□□□ -1.02
MSB4YOL112W DTD1Q07648 150 aaKnown RBP8.68□□□□□ -1.02
MSB4YOL112W BRX1Q08235 291 aaKnown RBP8.68□□□□□ -1.02
MSB4YOL112W RRG7Q08774 242 aaPredicted RBP8.68□□□□□ -1.02
MSB4YOL112W RPP2BP02400 110 aaKnown RBP8.67□□□□□ -1.02
MSB4YOL112W STE6P12866 1290 aa8.67□□□□□ -1.02
MSB4YOL112W ERD1P16151 362 aa8.67□□□□□ -1.02
MSB4YOL112W CWH43P25618 953 aa8.67□□□□□ -1.02
MSB4YOL112W RPS26AP39938 119 aaKnown RBP8.67□□□□□ -1.02
MSB4YOL112W RPS26BP39939 119 aaKnown RBP8.67□□□□□ -1.02
MSB4YOL112W ILM1P47155 203 aa8.67□□□□□ -1.02
MSB4YOL112W PGU1P47180 361 aa8.67□□□□□ -1.02
MSB4YOL112W YLR126CQ12288 251 aa8.67□□□□□ -1.02
MSB4YOL112W YOL163WP0CF20 169 aa8.66□□□□□ -1.02
MSB4YOL112W ERD2P18414 219 aa8.66□□□□□ -1.02
MSB4YOL112W APE2P32454 952 aaKnown RBP8.66□□□□□ -1.02
MSB4YOL112W HIR2P32480 875 aa8.66□□□□□ -1.02
MSB4YOL112W SLM4P38247 162 aa8.66□□□□□ -1.02
MSB4YOL112W YEL057CP39983 233 aa8.66□□□□□ -1.02
MSB4YOL112W BUD9P53226 547 aa8.66□□□□□ -1.02
MSB4YOL112W PBP1P53297 722 aaKnown RBP8.66□□□□□ -1.02
MSB4YOL112W EKI1Q03764 534 aa8.66□□□□□ -1.02
MSB4YOL112W YDR239CQ03780 787 aa8.66□□□□□ -1.02
MSB4YOL112W MIX14Q04341 121 aa8.66□□□□□ -1.02
MSB4YOL112W PLM2Q04383 521 aa8.66□□□□□ -1.02
MSB4YOL112W NDL1Q06568 189 aa8.66□□□□□ -1.02
MSB4YOL112W CDA2Q06703 312 aa8.66□□□□□ -1.02
MSB4YOL112W CRT10Q08226 957 aa8.66□□□□□ -1.02
MSB4YOL112W SKI7Q08491 747 aaPredicted RBP8.66□□□□□ -1.02
MSB4YOL112W NFI1Q12216 726 aa8.66□□□□□ -1.02
MSB4YOL112W PNS1Q12412 539 aa8.66□□□□□ -1.02
MSB4YOL112W RAD51P25454 400 aa8.65□□□□□ -1.02
MSB4YOL112W YCR100CP25606 316 aa8.65□□□□□ -1.02
MSB4YOL112W ITR2P30606 609 aa8.65□□□□□ -1.02
MSB4YOL112W HBS1P32769 611 aaKnown RBP8.65□□□□□ -1.02
MSB4YOL112W PEP12P32854 288 aa8.65□□□□□ -1.02
MSB4YOL112W MDJ1P35191 511 aa8.65□□□□□ -1.02
MSB4YOL112W YEL068CP39977 110 aa8.65□□□□□ -1.02
MSB4YOL112W SOK1P40317 901 aa8.65□□□□□ -1.02
MSB4YOL112W SHE4P51534 789 aa8.65□□□□□ -1.02
MSB4YOL112W RHO5P53879 331 aaKnown RBP8.65□□□□□ -1.02
MSB4YOL112W RSA1Q08932 381 aa8.65□□□□□ -1.02
MSB4YOL112W RPC40P07703 335 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W ERG8P24521 451 aa8.64□□□□□ -1.03
MSB4YOL112W TPO5P36029 618 aa8.64□□□□□ -1.03
MSB4YOL112W SRO77P38163 1010 aa8.64□□□□□ -1.03
MSB4YOL112W MTC4P38335 694 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W RRP4P38792 359 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W YJL193WP39542 402 aa8.64□□□□□ -1.03
MSB4YOL112W PRM8P53174 237 aa8.64□□□□□ -1.03
MSB4YOL112W HDA2Q06629 674 aa8.64□□□□□ -1.03
MSB4YOL112W VIK1Q12045 647 aa8.64□□□□□ -1.03
MSB4YOL112W RHB1P25378 209 aa8.64□□□□□ -1.03
MSB4YOL112W ARC19P33204 171 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W COG3P40094 801 aa8.64□□□□□ -1.03
MSB4YOL112W PRE6P40303 254 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W SNL1P40548 159 aa8.64□□□□□ -1.03
MSB4YOL112W GCN20P43535 752 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W PDR16P53860 351 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W YKR011CQ02209 353 aa8.64□□□□□ -1.03
MSB4YOL112W SRP1Q02821 542 aaKnown RBP8.64□□□□□ -1.03
MSB4YOL112W FDC1Q03034 503 aa8.64□□□□□ -1.03
MSB4YOL112W YDL218WQ07629 317 aa8.64□□□□□ -1.03
MSB4YOL112W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
MSB4YOL112W DFG16Q99234 619 aa8.64□□□□□ -1.03
MSB4YOL112W FBA1P14540 359 aaKnown RBP8.63□□□□□ -1.03
MSB4YOL112W CTA1P15202 515 aa8.63□□□□□ -1.03
MSB4YOL112W POL4P25615 582 aa8.63□□□□□ -1.03
MSB4YOL112W PTP2P29461 750 aa8.63□□□□□ -1.03
MSB4YOL112W MRPL6P32904 214 aa8.63□□□□□ -1.03
MSB4YOL112W MDL1P33310 695 aa8.63□□□□□ -1.03
MSB4YOL112W AHP1P38013 176 aaKnown RBP8.63□□□□□ -1.03
MSB4YOL112W YAR028WP39548 234 aa8.63□□□□□ -1.03
MSB4YOL112W SPO73P40031 143 aa8.63□□□□□ -1.03
MSB4YOL112W YIL169CP40442 995 aa8.63□□□□□ -1.03
MSB4YOL112W VNX1P42839 908 aa8.63□□□□□ -1.03
MSB4YOL112W UBX6P47049 396 aa8.63□□□□□ -1.03
MSB4YOL112W SNX41Q04053 625 aa8.63□□□□□ -1.03
MSB4YOL112W LOT6Q07923 191 aa8.63□□□□□ -1.03
MSB4YOL112W NOP12Q08208 459 aaKnown RBP8.63□□□□□ -1.03
MSB4YOL112W AVO1Q08236 1176 aa8.63□□□□□ -1.03
MSB4YOL112W ENB1Q08299 606 aa8.63□□□□□ -1.03
MSB4YOL112W YRA1Q12159 226 aaKnown RBP8.63□□□□□ -1.03
MSB4YOL112W DET1Q99288 334 aaKnown RBP8.63□□□□□ -1.03
MSB4YOL112W SEC16P48415 2195 aaKnown RBP8.62□□□□□ -1.03
MSB4YOL112W BLM10P43583 2143 aa8.62□□□□□ -1.03
MSB4YOL112W YFR010W-AP0C5N0 62 aa8.62□□□□□ -1.03
MSB4YOL112W APE4P38821 490 aa8.62□□□□□ -1.03
MSB4YOL112W PEX18P38855 283 aa8.62□□□□□ -1.03
MSB4YOL112W ALP1P38971 573 aa8.62□□□□□ -1.03
MSB4YOL112W YER010CP40011 234 aa8.62□□□□□ -1.03
MSB4YOL112W THO1P40040 218 aaKnown RBP8.62□□□□□ -1.03
MSB4YOL112W FAR7P43592 221 aa8.62□□□□□ -1.03
MSB4YOL112W DAM1P53267 343 aa8.62□□□□□ -1.03
MSB4YOL112W YMR226CQ05016 267 aaKnown RBP8.62□□□□□ -1.03
MSB4YOL112W BUR2Q05949 395 aa8.62□□□□□ -1.03
MSB4YOL112W RDR1Q08904 546 aa8.62□□□□□ -1.03
MSB4YOL112W MCP1Q12106 302 aa8.62□□□□□ -1.03
MSB4YOL112W SWM1Q12379 170 aa8.62□□□□□ -1.03
MSB4YOL112W MTR10Q99189 972 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms