RNA–Protein interactions for RNA: YMR257C

PET111, Mitochondrial translational activator specific for the COX2 mRNA, yeast

Gene PET111, Length 2,403 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PET111	YMR257C	HEM4	P06174	275 aa		0.48	□□□□□ -2.33
PET111	YMR257C	RAD1	P06777	1100 aa		0.48	□□□□□ -2.33
PET111	YMR257C	RPL23A	P0CX41	137 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	RPL23B	P0CX42	137 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	PUT4	P15380	627 aa		0.48	□□□□□ -2.33
PET111	YMR257C	TPM1	P17536	199 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	CKI1	P20485	582 aa		0.48	□□□□□ -2.33
PET111	YMR257C	SAG1	P20840	650 aa		0.48	□□□□□ -2.33
PET111	YMR257C	MIR1	P23641	311 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	RDS1	P25611	832 aa		0.48	□□□□□ -2.33
PET111	YMR257C	DEP1	P31385	405 aa		0.48	□□□□□ -2.33
PET111	YMR257C	MSK1	P32048	576 aa		0.48	□□□□□ -2.33
PET111	YMR257C	IES6	P32617	166 aa		0.48	□□□□□ -2.33
PET111	YMR257C	RAD5	P32849	1169 aa	Predicted RBP	0.48	□□□□□ -2.33
PET111	YMR257C	MID2	P36027	376 aa		0.48	□□□□□ -2.33
PET111	YMR257C	DOA1	P36037	715 aa		0.48	□□□□□ -2.33
PET111	YMR257C	PRY2	P36110	329 aa		0.48	□□□□□ -2.33
PET111	YMR257C	DBP7	P36120	742 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	FRM2	P37261	193 aa		0.48	□□□□□ -2.33
PET111	YMR257C	DTR1	P38125	572 aa		0.48	□□□□□ -2.33
PET111	YMR257C	IST2	P38250	946 aa		0.48	□□□□□ -2.33
PET111	YMR257C	SIF2	P38262	535 aa		0.48	□□□□□ -2.33
PET111	YMR257C	APE4	P38821	490 aa		0.48	□□□□□ -2.33
PET111	YMR257C	LSM12	P38828	187 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	YNL208W	P40159	199 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	LYS12	P40495	371 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	YIL089W	P40500	205 aa		0.48	□□□□□ -2.33
PET111	YMR257C	MAM33	P40513	266 aa		0.48	□□□□□ -2.33
PET111	YMR257C	YFL040W	P43562	540 aa		0.48	□□□□□ -2.33
PET111	YMR257C	IGD1	P43598	195 aa		0.48	□□□□□ -2.33
PET111	YMR257C	TRF5	P48561	642 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	YGL262W	P53054	175 aa		0.48	□□□□□ -2.33
PET111	YMR257C	MPS2	P53159	387 aa		0.48	□□□□□ -2.33
PET111	YMR257C	CDH1	P53197	566 aa		0.48	□□□□□ -2.33
PET111	YMR257C	YGR015C	P53208	328 aa		0.48	□□□□□ -2.33
PET111	YMR257C	YNL143C	P53908	130 aa		0.48	□□□□□ -2.33
PET111	YMR257C	APJ1	P53940	528 aa		0.48	□□□□□ -2.33
PET111	YMR257C	REX2	P54964	269 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	TPS1	Q00764	495 aa	Known RBP	0.48	□□□□□ -2.33
PET111	YMR257C	TRM82	Q03774	444 aa		0.48	□□□□□ -2.33
PET111	YMR257C	AIM33	Q04516	312 aa		0.48	□□□□□ -2.33
PET111	YMR257C	CSM3	Q04659	317 aa		0.48	□□□□□ -2.33
PET111	YMR257C	YDR018C	Q12185	396 aa		0.48	□□□□□ -2.33
PET111	YMR257C	YDR061W	Q12298	539 aa		0.48	□□□□□ -2.33
PET111	YMR257C	PSY3	Q12318	242 aa		0.48	□□□□□ -2.33
PET111	YMR257C	RPN6	Q12377	434 aa		0.48	□□□□□ -2.33
PET111	YMR257C	RAX2	Q12465	1220 aa		0.48	□□□□□ -2.33
PET111	YMR257C	PCL9	Q12477	304 aa		0.48	□□□□□ -2.33
PET111	YMR257C	SRN2	Q99176	213 aa		0.48	□□□□□ -2.33
PET111	YMR257C	PDE2	P06776	526 aa		0.47	□□□□□ -2.33
PET111	YMR257C	MXR2	P25566	168 aa		0.47	□□□□□ -2.33
PET111	YMR257C	RPL16A	P26784	199 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	MKK1	P32490	508 aa		0.47	□□□□□ -2.33
PET111	YMR257C	SSE1	P32589	693 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	AGA2	P32781	87 aa		0.47	□□□□□ -2.33
PET111	YMR257C	MRPS5	P33759	307 aa		0.47	□□□□□ -2.33
PET111	YMR257C	DAD2	P36162	133 aa		0.47	□□□□□ -2.33
PET111	YMR257C	GPI18	P38211	433 aa		0.47	□□□□□ -2.33
PET111	YMR257C	ECM8	P38246	354 aa		0.47	□□□□□ -2.33
PET111	YMR257C	SHE3	P38272	425 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	BMT2	P38278	337 aa		0.47	□□□□□ -2.33
PET111	YMR257C	PEX32	P38292	413 aa		0.47	□□□□□ -2.33
PET111	YMR257C	RRG9	P40156	214 aa		0.47	□□□□□ -2.33
PET111	YMR257C	LSG1	P53145	640 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	YGR067C	P53243	804 aa		0.47	□□□□□ -2.33
PET111	YMR257C	TPC1	P53257	314 aa		0.47	□□□□□ -2.33
PET111	YMR257C	TRM112	P53738	135 aa	Predicted RBP	0.47	□□□□□ -2.33
PET111	YMR257C	PRM1	P53835	661 aa		0.47	□□□□□ -2.33
PET111	YMR257C	RPL21A	Q02753	160 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	ERO1	Q03103	563 aa		0.47	□□□□□ -2.33
PET111	YMR257C	NAT4	Q04751	285 aa		0.47	□□□□□ -2.33
PET111	YMR257C	DBP9	Q06218	594 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	MIM1	Q08176	113 aa		0.47	□□□□□ -2.33
PET111	YMR257C	TAF10	Q12030	206 aa		0.47	□□□□□ -2.33
PET111	YMR257C	YDL109C	Q12103	647 aa		0.47	□□□□□ -2.33
PET111	YMR257C	RPL21B	Q12672	160 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	MEX67	Q99257	599 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	FSH3	Q99369	266 aa		0.47	□□□□□ -2.33
PET111	YMR257C	PSK1	P31374	1356 aa		0.47	□□□□□ -2.33
PET111	YMR257C	STE3	P06783	470 aa		0.47	□□□□□ -2.33
PET111	YMR257C	MRPL8	P22353	238 aa		0.47	□□□□□ -2.33
PET111	YMR257C	RPB9	P27999	122 aa		0.47	□□□□□ -2.33
PET111	YMR257C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
PET111	YMR257C	TIP20	P33891	701 aa		0.47	□□□□□ -2.33
PET111	YMR257C	PEX5	P35056	612 aa		0.47	□□□□□ -2.33
PET111	YMR257C	YKR015C	P36111	568 aa		0.47	□□□□□ -2.33
PET111	YMR257C	LAS1	P36146	502 aa	Predicted RBP	0.47	□□□□□ -2.33
PET111	YMR257C	MRPS9	P38120	278 aa		0.47	□□□□□ -2.33
PET111	YMR257C	KAP104	P38217	918 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	YPT35	P38815	214 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	EPL1	P43572	832 aa		0.47	□□□□□ -2.33
PET111	YMR257C	AIM23	P47015	356 aa		0.47	□□□□□ -2.33
PET111	YMR257C	PDR16	P53860	351 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	PRO2	P54885	456 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	SMP3	Q04174	516 aa		0.47	□□□□□ -2.33
PET111	YMR257C	SXM1	Q04175	944 aa	Known RBP	0.47	□□□□□ -2.33
PET111	YMR257C	YDR286C	Q05530	114 aa		0.47	□□□□□ -2.33
PET111	YMR257C	FAR10	Q06001	478 aa		0.47	□□□□□ -2.33
PET111	YMR257C	STE23	Q06010	1027 aa		0.47	□□□□□ -2.33
PET111	YMR257C	ECM19	Q06011	112 aa		0.47	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 307.7 ms