RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	DAL2	P25335	343 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	LSB5	P25369	354 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	FAA1	P30624	700 aa	Known RBP	1.2	□□□□□ -2.22
YCS4	YLR272C	YEF1	P32622	495 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	NPL6	P32832	435 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	CBT1	P36038	271 aa	Predicted RBP	1.2	□□□□□ -2.22
YCS4	YLR272C	CUE2	P36075	443 aa	Known RBP	1.2	□□□□□ -2.22
YCS4	YLR272C	SOL2	P37262	315 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	YAL037W	P39728	267 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	PAC2	P39937	518 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	GAT2	P40209	560 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	YJR011C	P47086	261 aa	Predicted RBP	1.2	□□□□□ -2.22
YCS4	YLR272C	RTT102	P53330	157 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	YNL260C	P53846	198 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	SPP2	Q02521	185 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	GAT3	Q07928	141 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	SLD7	Q08457	257 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	YLR111W	Q12528	110 aa		1.2	□□□□□ -2.22
YCS4	YLR272C	NUP157	P40064	1391 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	HHF1	P02309	103 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	STE7	P06784	515 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RSR1	P13856	272 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	MET16	P18408	261 aa	Predicted RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	DOA4	P32571	926 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	DRE2	P36152	348 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	ARC40	P38328	384 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	MIC12	P38341	106 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	CHS7	P38843	316 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	TDA10	P42938	290 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	NAS6	P50086	228 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RVB1	Q03940	463 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	RRB1	Q04225	511 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	SEG1	Q04279	960 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RRT8	Q08219	342 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	YLR108C	Q12259	485 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	NAG1	Q8TGN9	163 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	UBA3	Q99344	299 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	THO2	P53552	1597 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	SSC1	P0CS90	654 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	BGL2	P15703	313 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	MXR2	P25566	168 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	TIP1	P27654	210 aa	Predicted RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	ERG9	P29704	444 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	KRE6	P32486	720 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	KAR9	P32526	644 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	SPL2	P38839	148 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	DRN1	P53255	507 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	HXT11	P54862	567 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	CAC2	Q04199	468 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	UTP15	Q04305	513 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	MYO5	Q04439	1219 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	YEH2	Q07950	538 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	CPR4	P25334	318 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RPL16A	P26784	199 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.19	□□□□□ -2.22	not detected
YCS4	YLR272C	URA10	P30402	227 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	ATS1	P31386	333 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	IMP3	P32899	183 aa	Predicted RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	TPO5	P36029	618 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	OM14	P38325	134 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RCY1	P39531	840 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	CDH1	P53197	566 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	IBD2	P53892	351 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	SED5	Q01590	340 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	ARC18	Q05933	178 aa	Known RBP	1.19	□□□□□ -2.22
YCS4	YLR272C	HEM25	Q07534	307 aa		1.19	□□□□□ -2.22
YCS4	YLR272C	RIP1	P08067	215 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	MSF1	P08425	469 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	MAS2	P11914	482 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	MCK1	P21965	375 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	CMK2	P22517	447 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	IME2	P32581	645 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	ATO2	P32907	282 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	KTI12	P34253	313 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	ASC1	P38011	319 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	GPI15	P53961	229 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	CWC21	Q03375	135 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	DCP1	Q12517	231 aa	Predicted RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	XRN1	P22147	1528 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	COX3	P00420	269 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	COX5A	P00424	153 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	PGK1	P00560	416 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	PET123	P17558	318 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	CLB2	P24869	491 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	COY1	P34237	679 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	TSA1	P34760	196 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	BIG1	P38813	335 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	SFH5	P47008	294 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	APT1	P49435	187 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	LIF1	P53150	421 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	CRH1	P53301	507 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	MKC7	P53379	596 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	IRC4	Q03036	179 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	PRM15	Q03262	622 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	PAL1	Q05518	499 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	PIG1	Q06216	648 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	RRP9	Q06506	573 aa	Known RBP	1.18	□□□□□ -2.22
YCS4	YLR272C	MED4	Q12343	284 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	RAX2	Q12465	1220 aa		1.18	□□□□□ -2.22
YCS4	YLR272C	SSN2	P38931	1420 aa		1.18	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms