RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W UBA4P38820 440 aa2.27□□□□□ -2.05
HRD3YLR207W SCC4P40090 624 aa2.27□□□□□ -2.05
HRD3YLR207W YJL070CP40361 888 aa2.27□□□□□ -2.05
HRD3YLR207W YIL060WP40519 144 aa2.27□□□□□ -2.05
HRD3YLR207W SYG1P40528 902 aa2.27□□□□□ -2.05
HRD3YLR207W INA22P40576 216 aa2.27□□□□□ -2.05
HRD3YLR207W SNO3P43544 222 aa2.27□□□□□ -2.05
HRD3YLR207W ASG7P46993 209 aa2.27□□□□□ -2.05
HRD3YLR207W PYK2P52489 506 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W BUD32P53323 261 aa2.27□□□□□ -2.05
HRD3YLR207W PNG1Q02890 363 aa2.27□□□□□ -2.05
HRD3YLR207W FUS2Q05670 677 aa2.27□□□□□ -2.05
HRD3YLR207W YDR262WQ12331 272 aa2.27□□□□□ -2.05
HRD3YLR207W GIS3Q12418 502 aa2.27□□□□□ -2.05
HRD3YLR207W PAA1Q12447 191 aaKnown RBP2.27□□□□□ -2.05
HRD3YLR207W FSH3Q99369 266 aa2.27□□□□□ -2.05
HRD3YLR207W COX4P04037 155 aa2.26□□□□□ -2.05
HRD3YLR207W OPI3P05375 206 aa2.26□□□□□ -2.05
HRD3YLR207W CKA2P19454 339 aa2.26□□□□□ -2.05
HRD3YLR207W DAL2P25335 343 aa2.26□□□□□ -2.05
HRD3YLR207W RRT12P25381 491 aa2.26□□□□□ -2.05
HRD3YLR207W FRE1P32791 686 aa2.26□□□□□ -2.05
HRD3YLR207W DOA1P36037 715 aa2.26□□□□□ -2.05
HRD3YLR207W YBR056WP38081 501 aa2.26□□□□□ -2.05
HRD3YLR207W MRX3P38172 270 aa2.26□□□□□ -2.05
HRD3YLR207W TAE1P38340 232 aa2.26□□□□□ -2.05
HRD3YLR207W FET3P38993 636 aa2.26□□□□□ -2.05
HRD3YLR207W MMF1P40185 145 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W MPS1P54199 764 aa2.26□□□□□ -2.05
HRD3YLR207W ERG13P54839 491 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W TIM8P57744 87 aa2.26□□□□□ -2.05
HRD3YLR207W YMR087WQ04299 284 aa2.26□□□□□ -2.05
HRD3YLR207W GTO3Q04806 366 aa2.26□□□□□ -2.05
HRD3YLR207W GLO2Q05584 274 aa2.26□□□□□ -2.05
HRD3YLR207W YOR365CQ08844 703 aa2.26□□□□□ -2.05
HRD3YLR207W SPO12P17123 173 aa2.26□□□□□ -2.05
HRD3YLR207W YSR3P23501 404 aa2.26□□□□□ -2.05
HRD3YLR207W DEG1P31115 442 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W ATP11P32453 318 aa2.26□□□□□ -2.05
HRD3YLR207W ERG1P32476 496 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W TMT1P32643 299 aa2.26□□□□□ -2.05
HRD3YLR207W YNK1P36010 153 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W RRP3P38712 501 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W SHQ1P40486 507 aaPredicted RBP2.26□□□□□ -2.05
HRD3YLR207W FMC1P40491 155 aa2.26□□□□□ -2.05
HRD3YLR207W TRS85P46944 698 aa2.26□□□□□ -2.05
HRD3YLR207W MMT1Q03218 510 aa2.26□□□□□ -2.05
HRD3YLR207W SMP3Q04174 516 aa2.26□□□□□ -2.05
HRD3YLR207W YDR278CQ05612 105 aa2.26□□□□□ -2.05
HRD3YLR207W COQ11Q05892 277 aa2.26□□□□□ -2.05
HRD3YLR207W SSQ1Q05931 657 aaPredicted RBP2.26□□□□□ -2.05
HRD3YLR207W DNL4Q08387 944 aaPredicted RBP2.26□□□□□ -2.05
HRD3YLR207W ABP140Q08641 628 aaKnown RBP2.26□□□□□ -2.05
HRD3YLR207W YLR111WQ12528 110 aa2.26□□□□□ -2.05
HRD3YLR207W CDC36P06100 191 aaPredicted RBP2.25□□□□□ -2.05
HRD3YLR207W RAD7P06779 565 aa2.25□□□□□ -2.05
HRD3YLR207W TUB1P09733 447 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W TCP1P12612 559 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W HXT1P32465 570 aa2.25□□□□□ -2.05
HRD3YLR207W KRE6P32486 720 aa2.25□□□□□ -2.05
HRD3YLR207W COX13P32799 129 aa2.25□□□□□ -2.05
HRD3YLR207W CYM1P32898 989 aa2.25□□□□□ -2.05
HRD3YLR207W CCT2P39076 527 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W YER085CP40058 173 aa2.25□□□□□ -2.05
HRD3YLR207W SEC9P40357 651 aa2.25□□□□□ -2.05
HRD3YLR207W UTP25P40498 721 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W YPS6P40583 537 aa2.25□□□□□ -2.05
HRD3YLR207W SCD6P45978 349 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
HRD3YLR207W HMS2P47175 358 aa2.25□□□□□ -2.05
HRD3YLR207W PCP1P53259 346 aa2.25□□□□□ -2.05
HRD3YLR207W YGR168CP53293 376 aa2.25□□□□□ -2.05
HRD3YLR207W IDP3P53982 420 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W URC2Q04411 772 aa2.25□□□□□ -2.05
HRD3YLR207W BSC6Q08280 497 aa2.25□□□□□ -2.05
HRD3YLR207W GEP3Q08622 556 aa2.25□□□□□ -2.05
HRD3YLR207W AHC1Q12433 566 aa2.25□□□□□ -2.05
HRD3YLR207W BEM2P39960 2167 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W ARG4P04076 463 aaPredicted RBP2.25□□□□□ -2.05
HRD3YLR207W ARF1P11076 181 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W BAR1P12630 587 aa2.25□□□□□ -2.05
HRD3YLR207W FUS3P16892 353 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W DBR1P24309 405 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W RSA4P25382 515 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W ARO4P32449 370 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W EFB1P32471 206 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W MNS1P32906 549 aa2.25□□□□□ -2.05
HRD3YLR207W ARC19P33204 171 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W SKN1P33336 771 aa2.25□□□□□ -2.05
HRD3YLR207W ARP1P38696 384 aa2.25□□□□□ -2.05
HRD3YLR207W STP2P38704 541 aa2.25□□□□□ -2.05
HRD3YLR207W YHL026CP38740 315 aa2.25□□□□□ -2.05
HRD3YLR207W YEL075CP39972 122 aa2.25□□□□□ -2.05
HRD3YLR207W MSS2P40990 351 aa2.25□□□□□ -2.05
HRD3YLR207W YJL118WP47022 219 aa2.25□□□□□ -2.05
HRD3YLR207W CPR7P47103 393 aa2.25□□□□□ -2.05
HRD3YLR207W MNT4P53745 580 aa2.25□□□□□ -2.05
HRD3YLR207W YPL014WQ02606 381 aa2.25□□□□□ -2.05
HRD3YLR207W RTN1Q04947 295 aaKnown RBP2.25□□□□□ -2.05
HRD3YLR207W LDS2Q08218 356 aa2.25□□□□□ -2.05
HRD3YLR207W SAM4Q08985 325 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms