RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YPR1Q12458 312 aa3.53□□□□□ -1.84
CTK1YKL139W MEK1P24719 497 aaPredicted RBP3.52□□□□□ -1.85
CTK1YKL139W MKK1P32490 508 aa3.52□□□□□ -1.85
CTK1YKL139W YKL162CP36052 402 aa3.52□□□□□ -1.85
CTK1YKL139W ECM8P38246 354 aa3.52□□□□□ -1.85
CTK1YKL139W CTK3P46963 296 aaPredicted RBP3.52□□□□□ -1.85
CTK1YKL139W TAF6P53040 516 aa3.52□□□□□ -1.85
CTK1YKL139W YMR102CQ03177 834 aa3.52□□□□□ -1.85
CTK1YKL139W RVB1Q03940 463 aaKnown RBP3.52□□□□□ -1.85
CTK1YKL139W CSM3Q04659 317 aa3.52□□□□□ -1.85
CTK1YKL139W TSR1Q07381 788 aaKnown RBP3.52□□□□□ -1.85
CTK1YKL139W LOT6Q07923 191 aa3.52□□□□□ -1.85
CTK1YKL139W DEG1P31115 442 aaKnown RBP3.51□□□□□ -1.85
CTK1YKL139W KAR9P32526 644 aa3.51□□□□□ -1.85
CTK1YKL139W YUH1P35127 236 aa3.51□□□□□ -1.85
CTK1YKL139W RPC25P35718 212 aa3.51□□□□□ -1.85
CTK1YKL139W MRPL37P36532 105 aa3.51□□□□□ -1.85
CTK1YKL139W YPT35P38815 214 aaKnown RBP3.51□□□□□ -1.85
CTK1YKL139W DSE1P40077 573 aa3.51□□□□□ -1.85
CTK1YKL139W YCH1P42937 148 aa3.51□□□□□ -1.85
CTK1YKL139W AIM24P47127 394 aa3.51□□□□□ -1.85
CTK1YKL139W PXR1P53335 271 aaPredicted RBP3.51□□□□□ -1.85
CTK1YKL139W PRM6Q04705 352 aa3.51□□□□□ -1.85
CTK1YKL139W YMR317WQ04893 1140 aa3.51□□□□□ -1.85
CTK1YKL139W SMC5Q08204 1093 aa3.51□□□□□ -1.85
CTK1YKL139W YER078W-AQ3E7A2 54 aa3.51□□□□□ -1.85
CTK1YKL139W SSA3P09435 649 aaKnown RBP3.51□□□□□ -1.85
CTK1YKL139W MAM33P40513 266 aa3.51□□□□□ -1.85
CTK1YKL139W INA22P40576 216 aa3.51□□□□□ -1.85
CTK1YKL139W RRN5Q02983 363 aa3.51□□□□□ -1.85
CTK1YKL139W RRT8Q08219 342 aa3.51□□□□□ -1.85
CTK1YKL139W YOR387CQ08910 206 aa3.51□□□□□ -1.85
CTK1YKL139W YGK3Q12222 375 aaPredicted RBP3.51□□□□□ -1.85
CTK1YKL139W ICT1Q12385 394 aa3.51□□□□□ -1.85
CTK1YKL139W PCL9Q12477 304 aa3.51□□□□□ -1.85
CTK1YKL139W YBR298C-AQ8TGK4 73 aa3.51□□□□□ -1.85
CTK1YKL139W ECT1P33412 323 aa3.5□□□□□ -1.85
CTK1YKL139W SPO23P33757 523 aa3.5□□□□□ -1.85
CTK1YKL139W NDT80P38830 627 aa3.5□□□□□ -1.85
CTK1YKL139W EMC2P47133 292 aaKnown RBP3.5□□□□□ -1.85
CTK1YKL139W SCS3P53012 380 aa3.5□□□□□ -1.85
CTK1YKL139W CWC25P53854 179 aaKnown RBP3.5□□□□□ -1.85
CTK1YKL139W MTQ1P53944 314 aa3.5□□□□□ -1.85
CTK1YKL139W YNL050CP53952 270 aa3.5□□□□□ -1.85
CTK1YKL139W CSI1Q04368 295 aa3.5□□□□□ -1.85
CTK1YKL139W NDD1Q08887 554 aa3.5□□□□□ -1.85
CTK1YKL139W SAM4Q08985 325 aaKnown RBP3.5□□□□□ -1.85
CTK1YKL139W FCY22Q12119 530 aa3.5□□□□□ -1.85
CTK1YKL139W LDB17Q12342 491 aa3.5□□□□□ -1.85
CTK1YKL139W FMP16Q12497 93 aa3.5□□□□□ -1.85
CTK1YKL139W HTZ1Q12692 134 aaKnown RBP3.5□□□□□ -1.85
CTK1YKL139W RPS8AP0CX39 200 aaKnown RBP3.49□□□□□ -1.85
CTK1YKL139W RPS8BP0CX40 200 aaKnown RBP3.49□□□□□ -1.85
CTK1YKL139W NAM2P11325 894 aa3.49□□□□□ -1.85
CTK1YKL139W GPI12P23797 304 aa3.49□□□□□ -1.85
CTK1YKL139W POP5P28005 173 aa3.49□□□□□ -1.85
CTK1YKL139W ERG9P29704 444 aa3.49□□□□□ -1.85
CTK1YKL139W SDH3P33421 198 aa3.49□□□□□ -1.85
CTK1YKL139W AVT5P38176 459 aa3.49□□□□□ -1.85
CTK1YKL139W YMR262WP38430 313 aa3.49□□□□□ -1.85
CTK1YKL139W MMS21P38632 267 aa3.49□□□□□ -1.85
CTK1YKL139W HAC1P41546 238 aa3.49□□□□□ -1.85
CTK1YKL139W YJR085CP47131 105 aaKnown RBP3.49□□□□□ -1.85
CTK1YKL139W MPP6P53725 186 aaPredicted RBP3.49□□□□□ -1.85
CTK1YKL139W YNL260CP53846 198 aa3.49□□□□□ -1.85
CTK1YKL139W RRN11Q04712 507 aa3.49□□□□□ -1.85
CTK1YKL139W YPR091CQ06833 770 aa3.49□□□□□ -1.85
CTK1YKL139W TMS1Q12116 473 aa3.49□□□□□ -1.85
CTK1YKL139W DCC1P25559 380 aa3.48□□□□□ -1.85
CTK1YKL139W RPL5P26321 297 aaKnown RBP3.48□□□□□ -1.85
CTK1YKL139W RPL16AP26784 199 aaKnown RBP3.48□□□□□ -1.85
CTK1YKL139W TMT1P32643 299 aa3.48□□□□□ -1.85
CTK1YKL139W CIN2P46670 268 aa3.48□□□□□ -1.85
CTK1YKL139W UBX2Q04228 584 aa3.48□□□□□ -1.85
CTK1YKL139W RTN1Q04947 295 aaKnown RBP3.48□□□□□ -1.85
CTK1YKL139W PBA1Q05778 276 aa3.48□□□□□ -1.85
CTK1YKL139W YDL114WQ07530 308 aa3.48□□□□□ -1.85
CTK1YKL139W ALE1Q08548 619 aa3.48□□□□□ -1.85
CTK1YKL139W SLF1Q12034 447 aaKnown RBP3.48□□□□□ -1.85
CTK1YKL139W UBA3Q99344 299 aa3.48□□□□□ -1.85
CTK1YKL139W RAD7P06779 565 aa3.47□□□□□ -1.85
CTK1YKL139W RBK1P25332 333 aa3.47□□□□□ -1.85
CTK1YKL139W CHA1P25379 360 aaKnown RBP3.47□□□□□ -1.85
CTK1YKL139W CSM1P25651 190 aa3.47□□□□□ -1.85
CTK1YKL139W ICL1P28240 557 aaPredicted RBP3.47□□□□□ -1.85
CTK1YKL139W FUN26P31381 517 aa3.47□□□□□ -1.85
CTK1YKL139W ACB1P31787 87 aa3.47□□□□□ -1.85
CTK1YKL139W TPO5P36029 618 aa3.47□□□□□ -1.85
CTK1YKL139W DTR1P38125 572 aa3.47□□□□□ -1.85
CTK1YKL139W SMF2P38778 549 aa3.47□□□□□ -1.85
CTK1YKL139W SMC2P38989 1170 aaKnown RBP3.47□□□□□ -1.85
CTK1YKL139W KRE9P39005 276 aa3.47□□□□□ -1.85
CTK1YKL139W LSG1P53145 640 aaKnown RBP3.47□□□□□ -1.85
CTK1YKL139W RIF2Q06208 395 aa3.47□□□□□ -1.85
CTK1YKL139W YLL007CQ07799 665 aa3.47□□□□□ -1.85
CTK1YKL139W ERV2Q12284 196 aa3.47□□□□□ -1.85
CTK1YKL139W UNG1P12887 359 aa3.46□□□□□ -1.85
CTK1YKL139W MSI1P13712 422 aa3.46□□□□□ -1.85
CTK1YKL139W SPR1P32603 445 aa3.46□□□□□ -1.85
CTK1YKL139W YKR015CP36111 568 aa3.46□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms