RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR043C	YIR043C	ELP3	Q02908	557 aa	Known RBP	4.66	□□□□□ -1.66
YIR043C	YIR043C	PAA1	Q12447	191 aa	Known RBP	4.66	□□□□□ -1.66
YIR043C	YIR043C	INO80	P53115	1489 aa		4.66	□□□□□ -1.66
YIR043C	YIR043C	RAD1	P06777	1100 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	SAR1	P20606	190 aa	Known RBP	4.65	□□□□□ -1.67
YIR043C	YIR043C	MKK1	P32490	508 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	YBL059W	P34224	193 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	EBP2	P36049	427 aa	Known RBP	4.65	□□□□□ -1.67
YIR043C	YIR043C	YJR085C	P47131	105 aa	Known RBP	4.65	□□□□□ -1.67
YIR043C	YIR043C	VAC14	Q06708	880 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	YPR091C	Q06833	770 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	FCY22	Q12119	530 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	ERV2	Q12284	196 aa		4.65	□□□□□ -1.67
YIR043C	YIR043C	DCP1	Q12517	231 aa	Predicted RBP	4.65	□□□□□ -1.67
YIR043C	YIR043C	VMA5	P31412	392 aa	Known RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	YPT35	P38815	214 aa	Known RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	YHR218W	P38899	603 aa		4.64	□□□□□ -1.67
YIR043C	YIR043C	UTP25	P40498	721 aa	Known RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	CTK3	P46963	296 aa	Predicted RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	YMR010W	Q03687	405 aa		4.64	□□□□□ -1.67
YIR043C	YIR043C	RTN1	Q04947	295 aa	Known RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	HRI1	Q05905	244 aa	Known RBP	4.64	□□□□□ -1.67
YIR043C	YIR043C	RRG8	Q06109	277 aa		4.64	□□□□□ -1.67
YIR043C	YIR043C	TMS1	Q12116	473 aa		4.64	□□□□□ -1.67
YIR043C	YIR043C	CAR2	P07991	424 aa	Known RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	SPT15	P13393	240 aa	Known RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	MSI1	P13712	422 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	UGA1	P17649	471 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	DAL2	P25335	343 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	RAD23	P32628	398 aa	Known RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	SPO23	P33757	523 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	FET3	P38993	636 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	LOC1	P43586	204 aa	Predicted RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	GCD14	P46959	383 aa	Predicted RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YIR043C	YIR043C	RVB1	Q03940	463 aa	Known RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	YMR111C	Q04461	462 aa	Predicted RBP	4.63	□□□□□ -1.67
YIR043C	YIR043C	ECM18	Q04623	453 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	CSM3	Q04659	317 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	RIF2	Q06208	395 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	YPR1	Q12458	312 aa		4.63	□□□□□ -1.67
YIR043C	YIR043C	CSE2	P33308	149 aa		4.62	□□□□□ -1.67
YIR043C	YIR043C	VPS45	P38932	577 aa		4.62	□□□□□ -1.67
YIR043C	YIR043C	MST27	P53176	234 aa		4.62	□□□□□ -1.67
YIR043C	YIR043C	SPO19	Q03029	223 aa		4.62	□□□□□ -1.67
YIR043C	YIR043C	UBA3	Q99344	299 aa		4.62	□□□□□ -1.67
YIR043C	YIR043C	STE2	D6VTK4	431 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	YUR1	P26725	428 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	RPL16A	P26784	199 aa	Known RBP	4.61	□□□□□ -1.67
YIR043C	YIR043C	NAM9	P27929	486 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	AVT5	P38176	459 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	RFS1	P38234	210 aa	Known RBP	4.61	□□□□□ -1.67
YIR043C	YIR043C	TAF6	P53040	516 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	PXR1	P53335	271 aa	Predicted RBP	4.61	□□□□□ -1.67
YIR043C	YIR043C	REX2	P54964	269 aa	Known RBP	4.61	□□□□□ -1.67
YIR043C	YIR043C	YDL114W	Q07530	308 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	DNL4	Q08387	944 aa	Predicted RBP	4.61	□□□□□ -1.67
YIR043C	YIR043C	YDL199C	Q12407	687 aa		4.61	□□□□□ -1.67
YIR043C	YIR043C	MSS116	P15424	664 aa	Known RBP	4.6	□□□□□ -1.67
YIR043C	YIR043C	PET123	P17558	318 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	PAN6	P40459	309 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	MEP2	P41948	499 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	YCH1	P42937	148 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	YFR057W	P43625	151 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	CIN2	P46670	268 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	LOH1	P47055	219 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	YGL185C	P53100	379 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	SAM4	Q08985	325 aa	Known RBP	4.6	□□□□□ -1.67
YIR043C	YIR043C	YDL109C	Q12103	647 aa		4.6	□□□□□ -1.67
YIR043C	YIR043C	RPS18A	P0CX55	146 aa	Known RBP	4.59	□□□□□ -1.67
YIR043C	YIR043C	RPS18B	P0CX56	146 aa	Predicted RBP	4.59	□□□□□ -1.67
YIR043C	YIR043C	CPR3	P25719	182 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	ARO2	P28777	376 aa	Known RBP	4.59	□□□□□ -1.67
YIR043C	YIR043C	ERG9	P29704	444 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	FUN26	P31381	517 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	HXT1	P32465	570 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	YKL162C	P36052	402 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	YKR015C	P36111	568 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	MMS21	P38632	267 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	YNL208W	P40159	199 aa	Known RBP	4.59	□□□□□ -1.67
YIR043C	YIR043C	REE1	P40893	198 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	SNM1	P40993	198 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	EGT2	P42835	1041 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	RPN14	P53196	417 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	CLD1	P53264	445 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	BOR1	P53838	576 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	APC4	Q04601	652 aa		4.59	□□□□□ -1.67
YIR043C	YIR043C	RBK1	P25332	333 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	DCC1	P25559	380 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	RPC25	P35718	212 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	YKL070W	P36087	169 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	YMR262W	P38430	313 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	FHL1	P39521	936 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	DSE1	P40077	573 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	DFG10	P40526	253 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	BIR1	P47134	954 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	SHY1	P53266	389 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	CRH1	P53301	507 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	ERV41	Q04651	352 aa		4.58	□□□□□ -1.68
YIR043C	YIR043C	IRC25	Q07951	179 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms