RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W ILV5P06168 395 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W PCL1P24867 279 aa2.05□□□□□ -2.08
NIC96YFR002W RHB1P25378 209 aa2.05□□□□□ -2.08
NIC96YFR002W KAR9P32526 644 aa2.05□□□□□ -2.08
NIC96YFR002W UTH1P36135 365 aa2.05□□□□□ -2.08
NIC96YFR002W VHC1P38329 1120 aa2.05□□□□□ -2.08
NIC96YFR002W STN1P38960 494 aa2.05□□□□□ -2.08
NIC96YFR002W RPA34P47006 233 aaPredicted RBP2.05□□□□□ -2.08
NIC96YFR002W BRO1P48582 844 aa2.05□□□□□ -2.08
NIC96YFR002W ROG1P53118 685 aa2.05□□□□□ -2.08
NIC96YFR002W MPS2P53159 387 aa2.05□□□□□ -2.08
NIC96YFR002W ARP5P53946 755 aa2.05□□□□□ -2.08
NIC96YFR002W CUR1Q06469 252 aa2.05□□□□□ -2.08
NIC96YFR002W YOR012WQ12351 137 aa2.05□□□□□ -2.08
NIC96YFR002W TEF1P02994 458 aaKnown RBP2.04□□□□□ -2.08
NIC96YFR002W SCEIP03882 235 aa2.04□□□□□ -2.08
NIC96YFR002W ADE4P04046 510 aaKnown RBP2.04□□□□□ -2.08
NIC96YFR002W RPS24AP0CX31 135 aaKnown RBP2.04□□□□□ -2.08
NIC96YFR002W RPS24BP0CX32 135 aaKnown RBP2.04□□□□□ -2.08
NIC96YFR002W SRV2P17555 526 aaKnown RBP2.04□□□□□ -2.08
NIC96YFR002W SAG1P20840 650 aa2.04□□□□□ -2.08
NIC96YFR002W GRR1P24814 1151 aa2.04□□□□□ -2.08
NIC96YFR002W PTK1P36002 662 aaPredicted RBP2.04□□□□□ -2.08
NIC96YFR002W LIN1P38852 340 aaPredicted RBP2.04□□□□□ -2.08
NIC96YFR002W LYS1P38998 373 aaRIP-Chip data2.04□□□□□ -2.08not detected
NIC96YFR002W YMR111CQ04461 462 aaPredicted RBP2.04□□□□□ -2.08
NIC96YFR002W STE23Q06010 1027 aa2.04□□□□□ -2.08
NIC96YFR002W RMD5Q12508 421 aa2.04□□□□□ -2.08
NIC96YFR002W VPS63O13549 108 aa2.03□□□□□ -2.08
NIC96YFR002W CBP2P03874 630 aaPredicted RBP2.03□□□□□ -2.08
NIC96YFR002W PUT4P15380 627 aa2.03□□□□□ -2.08
NIC96YFR002W IME2P32581 645 aa2.03□□□□□ -2.08
NIC96YFR002W SOR1P35497 357 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W DRE2P36152 348 aa2.03□□□□□ -2.08
NIC96YFR002W RRP4P38792 359 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W MNL1P38888 796 aa2.03□□□□□ -2.08
NIC96YFR002W VPS45P38932 577 aa2.03□□□□□ -2.08
NIC96YFR002W SSO2P39926 295 aa2.03□□□□□ -2.08
NIC96YFR002W RRP46P53256 223 aaPredicted RBP2.03□□□□□ -2.08
NIC96YFR002W HAL1Q01766 294 aa2.03□□□□□ -2.08
NIC96YFR002W YDR541CQ03049 344 aa2.03□□□□□ -2.08
NIC96YFR002W ECM18Q04623 453 aa2.03□□□□□ -2.08
NIC96YFR002W SOR2Q07786 357 aa2.03□□□□□ -2.08
NIC96YFR002W YDL012CQ12489 107 aa2.03□□□□□ -2.08
NIC96YFR002W ARG4P04076 463 aaPredicted RBP2.03□□□□□ -2.08
NIC96YFR002W PDE2P06776 526 aa2.03□□□□□ -2.08
NIC96YFR002W LSB5P25369 354 aa2.03□□□□□ -2.08
NIC96YFR002W MUD1P32605 298 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W RPT5P33297 434 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W STP2P38704 541 aa2.03□□□□□ -2.08
NIC96YFR002W YHR177WP38867 453 aa2.03□□□□□ -2.08
NIC96YFR002W MNN9P39107 395 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W MMF1P40185 145 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W AGX1P43567 385 aa2.03□□□□□ -2.08
NIC96YFR002W YGR266WP53326 701 aa2.03□□□□□ -2.08
NIC96YFR002W PRM1P53835 661 aa2.03□□□□□ -2.08
NIC96YFR002W KAP95Q06142 861 aaKnown RBP2.03□□□□□ -2.08
NIC96YFR002W SGT1Q08446 395 aa2.03□□□□□ -2.08
NIC96YFR002W PFK27Q12471 397 aaPredicted RBP2.03□□□□□ -2.08
NIC96YFR002W TAO3P40468 2376 aa2.03□□□□□ -2.08
NIC96YFR002W GAL7P08431 366 aa2.02□□□□□ -2.09
NIC96YFR002W POP5P28005 173 aa2.02□□□□□ -2.09
NIC96YFR002W KKQ8P36004 724 aa2.02□□□□□ -2.09
NIC96YFR002W QDR3P38227 689 aa2.02□□□□□ -2.09
NIC96YFR002W SPP381P38282 291 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W AIM20P40451 204 aa2.02□□□□□ -2.09
NIC96YFR002W LOC1P43586 204 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W YFR018CP43599 363 aa2.02□□□□□ -2.09
NIC96YFR002W ASN2P49090 572 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W STD1Q02794 444 aa2.02□□□□□ -2.09
NIC96YFR002W RRB1Q04225 511 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W SNT309Q06091 175 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W IPK1Q06667 281 aa2.02□□□□□ -2.09
NIC96YFR002W RRT8Q08219 342 aa2.02□□□□□ -2.09
NIC96YFR002W MRPL23Q12487 163 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W GCD2P12754 651 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W SNA3P14359 133 aa2.02□□□□□ -2.09
NIC96YFR002W CTR86P25355 563 aa2.02□□□□□ -2.09
NIC96YFR002W PSO2P30620 661 aa2.02□□□□□ -2.09
NIC96YFR002W HSP104P31539 908 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W YSC83P32792 385 aa2.02□□□□□ -2.09
NIC96YFR002W MRPL10P36520 322 aa2.02□□□□□ -2.09
NIC96YFR002W RRN10P38204 145 aa2.02□□□□□ -2.09
NIC96YFR002W GAT2P40209 560 aa2.02□□□□□ -2.09
NIC96YFR002W PHO86P46956 311 aa2.02□□□□□ -2.09
NIC96YFR002W GCD14P46959 383 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W YJR011CP47086 261 aaPredicted RBP2.02□□□□□ -2.09
NIC96YFR002W EGD1Q02642 157 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W RRN5Q02983 363 aa2.02□□□□□ -2.09
NIC96YFR002W SGT2Q12118 346 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W FKS1P38631 1876 aaKnown RBP2.02□□□□□ -2.09
NIC96YFR002W CDC37P06101 506 aaKnown RBP2.01□□□□□ -2.09
NIC96YFR002W RAD57P25301 460 aa2.01□□□□□ -2.09
NIC96YFR002W EBP2P36049 427 aaKnown RBP2.01□□□□□ -2.09
NIC96YFR002W YPS6P40583 537 aa2.01□□□□□ -2.09
NIC96YFR002W HMS2P47175 358 aa2.01□□□□□ -2.09
NIC96YFR002W TLG1Q03322 224 aa2.01□□□□□ -2.09
NIC96YFR002W YLR413WQ06689 675 aa2.01□□□□□ -2.09
NIC96YFR002W SRN2Q99176 213 aa2.01□□□□□ -2.09
NIC96YFR002W GAL3P13045 520 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms