RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	SNC1	P31109	117 aa		3.09	□□□□□ -1.91
SPT2	YER161C	UTR4	P32626	227 aa		3.09	□□□□□ -1.91
SPT2	YER161C	CYM1	P32898	989 aa		3.09	□□□□□ -1.91
SPT2	YER161C	MNS1	P32906	549 aa		3.09	□□□□□ -1.91
SPT2	YER161C	YCR041W	P37265	110 aa		3.09	□□□□□ -1.91
SPT2	YER161C	APD1	P38281	316 aa		3.09	□□□□□ -1.91
SPT2	YER161C	FLO5	P38894	1075 aa		3.09	□□□□□ -1.91
SPT2	YER161C	LYS1	P38998	373 aa	RIP-Chip data	3.09	□□□□□ -1.91	not detected
SPT2	YER161C	FAU1	P40099	211 aa		3.09	□□□□□ -1.91
SPT2	YER161C	FMC1	P40491	155 aa		3.09	□□□□□ -1.91
SPT2	YER161C	YIL024C	P40543	189 aa		3.09	□□□□□ -1.91
SPT2	YER161C	SSN8	P47821	323 aa		3.09	□□□□□ -1.91
SPT2	YER161C	YDL186W	P48568	277 aa		3.09	□□□□□ -1.91
SPT2	YER161C	RET3	P53600	189 aa		3.09	□□□□□ -1.91
SPT2	YER161C	RHO4	Q00246	291 aa		3.09	□□□□□ -1.91
SPT2	YER161C	ARP10	Q04549	284 aa		3.09	□□□□□ -1.91
SPT2	YER161C	SWF1	Q04629	336 aa		3.09	□□□□□ -1.91
SPT2	YER161C	NAT4	Q04751	285 aa		3.09	□□□□□ -1.91
SPT2	YER161C	ATG34	Q12292	412 aa		3.09	□□□□□ -1.91
SPT2	YER161C	YOR338W	Q99326	363 aa		3.09	□□□□□ -1.91
SPT2	YER161C	UBA3	Q99344	299 aa		3.09	□□□□□ -1.91
SPT2	YER161C	HAP1	P0CE41	1502 aa		3.09	□□□□□ -1.92
SPT2	YER161C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SPT2	YER161C	RAD3	P06839	778 aa		3.08	□□□□□ -1.92
SPT2	YER161C	ATP1	P07251	545 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	RPS16A	P0CX51	143 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	RPS16B	P0CX52	143 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	POL30	P15873	258 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	OSM1	P21375	501 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	VPS1	P21576	704 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	VMA5	P31412	392 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	ASF2	P32448	525 aa	Predicted RBP	3.08	□□□□□ -1.92
SPT2	YER161C	YNK1	P36010	153 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	YKL162C	P36052	402 aa		3.08	□□□□□ -1.92
SPT2	YER161C	RSM22	P36056	628 aa		3.08	□□□□□ -1.92
SPT2	YER161C	RIM2	P38127	377 aa		3.08	□□□□□ -1.92
SPT2	YER161C	YAL037W	P39728	267 aa		3.08	□□□□□ -1.92
SPT2	YER161C	BTT1	P40314	149 aa	Predicted RBP	3.08	□□□□□ -1.92
SPT2	YER161C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	RIP-Chip
SPT2	YER161C	FMP33	P46998	180 aa		3.08	□□□□□ -1.92
SPT2	YER161C	YIP1	P53039	248 aa		3.08	□□□□□ -1.92
SPT2	YER161C	FRE4	P53746	719 aa		3.08	□□□□□ -1.92
SPT2	YER161C	HXT11	P54862	567 aa		3.08	□□□□□ -1.92
SPT2	YER161C	REX2	P54964	269 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	SLD5	Q03406	294 aa		3.08	□□□□□ -1.92
SPT2	YER161C	BET5	Q03630	159 aa		3.08	□□□□□ -1.92
SPT2	YER161C	URH1	Q04179	340 aa		3.08	□□□□□ -1.92
SPT2	YER161C	MYO5	Q04439	1219 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	DIB1	Q06819	143 aa	Predicted RBP	3.08	□□□□□ -1.92
SPT2	YER161C	CMS1	Q07897	291 aa	Known RBP	3.08	□□□□□ -1.92
SPT2	YER161C	YOR029W	Q12243	111 aa		3.08	□□□□□ -1.92
SPT2	YER161C	ERP3	Q12403	225 aa		3.08	□□□□□ -1.92
SPT2	YER161C	SET6	Q12529	373 aa		3.08	□□□□□ -1.92
SPT2	YER161C	USO1	P25386	1790 aa		3.07	□□□□□ -1.92
SPT2	YER161C	HEM2	P05373	342 aa		3.07	□□□□□ -1.92
SPT2	YER161C	YAR066W	P0CX18	203 aa		3.07	□□□□□ -1.92
SPT2	YER161C	YHR214W	P0CX19	203 aa		3.07	□□□□□ -1.92
SPT2	YER161C	RVS161	P25343	265 aa	Known RBP	3.07	□□□□□ -1.92
SPT2	YER161C	CTR86	P25355	563 aa		3.07	□□□□□ -1.92
SPT2	YER161C	POP5	P28005	173 aa		3.07	□□□□□ -1.92
SPT2	YER161C	FRE2	P36033	711 aa		3.07	□□□□□ -1.92
SPT2	YER161C	HIS2	P38635	335 aa		3.07	□□□□□ -1.92
SPT2	YER161C	FHL1	P39521	936 aa		3.07	□□□□□ -1.92
SPT2	YER161C	CDC40	P40968	455 aa	Predicted RBP	3.07	□□□□□ -1.92
SPT2	YER161C	HIT1	P46973	164 aa		3.07	□□□□□ -1.92
SPT2	YER161C	MRX5	P47007	382 aa		3.07	□□□□□ -1.92
SPT2	YER161C	AIM24	P47127	394 aa		3.07	□□□□□ -1.92
SPT2	YER161C	VPS25	P47142	202 aa		3.07	□□□□□ -1.92
SPT2	YER161C	TOS2	P50078	622 aa		3.07	□□□□□ -1.92
SPT2	YER161C	NUP100	Q02629	959 aa		3.07	□□□□□ -1.92
SPT2	YER161C	SRL4	Q03085	281 aa		3.07	□□□□□ -1.92
SPT2	YER161C	RVB1	Q03940	463 aa	Known RBP	3.07	□□□□□ -1.92
SPT2	YER161C	PBP4	Q07362	185 aa	Known RBP	3.07	□□□□□ -1.92
SPT2	YER161C	SLF1	Q12034	447 aa	Known RBP	3.07	□□□□□ -1.92
SPT2	YER161C	ORT1	Q12375	292 aa		3.07	□□□□□ -1.92
SPT2	YER161C	MSF1	P08425	469 aa		3.06	□□□□□ -1.92
SPT2	YER161C	MATALPHA1	P0CY06	175 aa		3.06	□□□□□ -1.92
SPT2	YER161C	HMLALPHA1	P0CY07	175 aa		3.06	□□□□□ -1.92
SPT2	YER161C	SPO12	P17123	173 aa		3.06	□□□□□ -1.92
SPT2	YER161C	ITR1	P30605	584 aa		3.06	□□□□□ -1.92
SPT2	YER161C	EFB1	P32471	206 aa	Known RBP	3.06	□□□□□ -1.92
SPT2	YER161C	ZUO1	P32527	433 aa	Known RBP	3.06	□□□□□ -1.92
SPT2	YER161C	MRPS5	P33759	307 aa		3.06	□□□□□ -1.92
SPT2	YER161C	COS9	P36034	407 aa		3.06	□□□□□ -1.92
SPT2	YER161C	PHD1	P36093	366 aa		3.06	□□□□□ -1.92
SPT2	YER161C	MAL32	P38158	584 aa		3.06	□□□□□ -1.92
SPT2	YER161C	PHO90	P39535	881 aa		3.06	□□□□□ -1.92
SPT2	YER161C	LCP5	P40079	357 aa	Predicted RBP	3.06	□□□□□ -1.92
SPT2	YER161C	OTU1	P43558	301 aa		3.06	□□□□□ -1.92
SPT2	YER161C	IRC7	P43623	340 aa		3.06	□□□□□ -1.92
SPT2	YER161C	GEA1	P47102	1408 aa	Predicted RBP	3.06	□□□□□ -1.92
SPT2	YER161C	TRF5	P48561	642 aa	Known RBP	3.06	□□□□□ -1.92
SPT2	YER161C	NAS6	P50086	228 aa		3.06	□□□□□ -1.92
SPT2	YER161C	MAL12	P53341	584 aa		3.06	□□□□□ -1.92
SPT2	YER161C	SPR6	Q01684	191 aa		3.06	□□□□□ -1.92
SPT2	YER161C	CTL1	Q03220	320 aa	Known RBP	3.06	□□□□□ -1.92
SPT2	YER161C	RSN1	Q03516	953 aa		3.06	□□□□□ -1.92
SPT2	YER161C	BNA7	Q04066	261 aa		3.06	□□□□□ -1.92
SPT2	YER161C	SIA1	Q12212	622 aa		3.06	□□□□□ -1.92
SPT2	YER161C	RRI1	Q12468	440 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms