RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RIB4P50861 169 aaPredicted RBP3.5□□□□□ -1.85
SHU2YDR078C YLH47Q06493 454 aa3.5□□□□□ -1.85
SHU2YDR078C YPR091CQ06833 770 aa3.5□□□□□ -1.85
SHU2YDR078C YOR387CQ08910 206 aa3.5□□□□□ -1.85
SHU2YDR078C APC2Q12440 853 aa3.5□□□□□ -1.85
SHU2YDR078C RRP36Q12481 300 aaPredicted RBP3.5□□□□□ -1.85
SHU2YDR078C RPL18AP0CX49 186 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C RPL18BP0CX50 186 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C MSI1P13712 422 aa3.49□□□□□ -1.85
SHU2YDR078C DAL2P25335 343 aa3.49□□□□□ -1.85
SHU2YDR078C DEG1P31115 442 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C BUD2P33314 1104 aa3.49□□□□□ -1.85
SHU2YDR078C ECM8P38246 354 aa3.49□□□□□ -1.85
SHU2YDR078C YPT35P38815 214 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C HAC1P41546 238 aa3.49□□□□□ -1.85
SHU2YDR078C AIP1P46680 615 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C CTK3P46963 296 aaPredicted RBP3.49□□□□□ -1.85
SHU2YDR078C YJR030CP47101 745 aa3.49□□□□□ -1.85
SHU2YDR078C MST27P53176 234 aa3.49□□□□□ -1.85
SHU2YDR078C VOA1P53262 265 aa3.49□□□□□ -1.85
SHU2YDR078C IMP4P53941 290 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C ECM18Q04623 453 aa3.49□□□□□ -1.85
SHU2YDR078C CSM3Q04659 317 aa3.49□□□□□ -1.85
SHU2YDR078C HRI1Q05905 244 aaKnown RBP3.49□□□□□ -1.85
SHU2YDR078C RRG8Q06109 277 aa3.49□□□□□ -1.85
SHU2YDR078C RIF2Q06208 395 aa3.49□□□□□ -1.85
SHU2YDR078C VAC14Q06708 880 aa3.49□□□□□ -1.85
SHU2YDR078C FCY22Q12119 530 aa3.49□□□□□ -1.85
SHU2YDR078C INO80P53115 1489 aa3.48□□□□□ -1.85
SHU2YDR078C PHO2P07269 559 aa3.48□□□□□ -1.85
SHU2YDR078C GAL7P08431 366 aa3.48□□□□□ -1.85
SHU2YDR078C OM45P16547 393 aa3.48□□□□□ -1.85
SHU2YDR078C RPB5P20434 215 aa3.48□□□□□ -1.85
SHU2YDR078C SAR1P20606 190 aaKnown RBP3.48□□□□□ -1.85
SHU2YDR078C NAM9P27929 486 aa3.48□□□□□ -1.85
SHU2YDR078C ERG9P29704 444 aa3.48□□□□□ -1.85
SHU2YDR078C AVT5P38176 459 aa3.48□□□□□ -1.85
SHU2YDR078C PAN6P40459 309 aa3.48□□□□□ -1.85
SHU2YDR078C UTP25P40498 721 aaKnown RBP3.48□□□□□ -1.85
SHU2YDR078C CDC40P40968 455 aaPredicted RBP3.48□□□□□ -1.85
SHU2YDR078C TAF6P53040 516 aa3.48□□□□□ -1.85
SHU2YDR078C SPO19Q03029 223 aa3.48□□□□□ -1.85
SHU2YDR078C BUR2Q05949 395 aa3.48□□□□□ -1.85
SHU2YDR078C YLR413WQ06689 675 aa3.48□□□□□ -1.85
SHU2YDR078C FDH1Q08911 376 aa3.48□□□□□ -1.85
SHU2YDR078C TMS1Q12116 473 aa3.48□□□□□ -1.85
SHU2YDR078C PAA1Q12447 191 aaKnown RBP3.48□□□□□ -1.85
SHU2YDR078C DCP1Q12517 231 aaPredicted RBP3.48□□□□□ -1.85
SHU2YDR078C PET123P17558 318 aa3.47□□□□□ -1.85
SHU2YDR078C RPL16AP26784 199 aaKnown RBP3.47□□□□□ -1.85
SHU2YDR078C MKK1P32490 508 aa3.47□□□□□ -1.85
SHU2YDR078C CSE2P33308 149 aa3.47□□□□□ -1.85
SHU2YDR078C YKR015CP36111 568 aa3.47□□□□□ -1.85
SHU2YDR078C IML3P38265 245 aa3.47□□□□□ -1.85
SHU2YDR078C PTI1P39927 425 aaPredicted RBP3.47□□□□□ -1.85
SHU2YDR078C INA22P40576 216 aa3.47□□□□□ -1.85
SHU2YDR078C YCH1P42937 148 aa3.47□□□□□ -1.85
SHU2YDR078C CIN2P46670 268 aa3.47□□□□□ -1.85
SHU2YDR078C GCD14P46959 383 aaPredicted RBP3.47□□□□□ -1.85
SHU2YDR078C LOH1P47055 219 aa3.47□□□□□ -1.85
SHU2YDR078C PNC1P53184 216 aaKnown RBP3.47□□□□□ -1.85
SHU2YDR078C CLD1P53264 445 aa3.47□□□□□ -1.85
SHU2YDR078C YGR168CP53293 376 aa3.47□□□□□ -1.85
SHU2YDR078C RVB1Q03940 463 aaKnown RBP3.47□□□□□ -1.85
SHU2YDR078C CMS1Q07897 291 aaKnown RBP3.47□□□□□ -1.85
SHU2YDR078C IRC25Q07951 179 aa3.47□□□□□ -1.85
SHU2YDR078C ALE1Q08548 619 aa3.47□□□□□ -1.85
SHU2YDR078C JID1Q12350 301 aa3.47□□□□□ -1.85
SHU2YDR078C YDL199CQ12407 687 aa3.47□□□□□ -1.85
SHU2YDR078C IZH2Q12442 317 aa3.47□□□□□ -1.85
SHU2YDR078C UBA3Q99344 299 aa3.47□□□□□ -1.85
SHU2YDR078C SUP35P05453 685 aaKnown RBP3.46□□□□□ -1.86
SHU2YDR078C UGA1P17649 471 aa3.46□□□□□ -1.86
SHU2YDR078C CHA1P25379 360 aaKnown RBP3.46□□□□□ -1.86
SHU2YDR078C DCC1P25559 380 aa3.46□□□□□ -1.86
SHU2YDR078C VMA5P31412 392 aaKnown RBP3.46□□□□□ -1.86
SHU2YDR078C YGR210CP42942 411 aa3.46□□□□□ -1.86
SHU2YDR078C PXR1P53335 271 aaPredicted RBP3.46□□□□□ -1.86
SHU2YDR078C REX2P54964 269 aaKnown RBP3.46□□□□□ -1.86
SHU2YDR078C ERV41Q04651 352 aa3.46□□□□□ -1.86
SHU2YDR078C MFG1Q07684 458 aa3.46□□□□□ -1.86
SHU2YDR078C YDL109CQ12103 647 aa3.46□□□□□ -1.86
SHU2YDR078C MRPL23Q12487 163 aaPredicted RBP3.46□□□□□ -1.86
SHU2YDR078C HEM4P06174 275 aa3.45□□□□□ -1.86
SHU2YDR078C CAR2P07991 424 aaKnown RBP3.45□□□□□ -1.86
SHU2YDR078C RPS18AP0CX55 146 aaKnown RBP3.45□□□□□ -1.86
SHU2YDR078C RPS18BP0CX56 146 aaPredicted RBP3.45□□□□□ -1.86
SHU2YDR078C CBS2P14905 389 aa3.45□□□□□ -1.86
SHU2YDR078C ACB1P31787 87 aa3.45□□□□□ -1.86
SHU2YDR078C ANR2P36090 516 aaPredicted RBP3.45□□□□□ -1.86
SHU2YDR078C VPS45P38932 577 aa3.45□□□□□ -1.86
SHU2YDR078C EGT2P42835 1041 aa3.45□□□□□ -1.86
SHU2YDR078C YPI1P43587 155 aa3.45□□□□□ -1.86
SHU2YDR078C YFR057WP43625 151 aa3.45□□□□□ -1.86
SHU2YDR078C LSG1P53145 640 aaKnown RBP3.45□□□□□ -1.86
SHU2YDR078C YMR010WQ03687 405 aa3.45□□□□□ -1.86
SHU2YDR078C YTH1Q06102 208 aaPredicted RBP3.45□□□□□ -1.86
SHU2YDR078C TLG2Q08144 397 aa3.45□□□□□ -1.86
SHU2YDR078C DNL4Q08387 944 aaPredicted RBP3.45□□□□□ -1.86
SHU2YDR078C RPL23AP0CX41 137 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms