RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	RIM20	Q12033	661 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YPL066W	Q12194	479 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YOR022C	Q12204	715 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	LEU2	P04173	364 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	CBP1	P07252	654 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MOD5	P07884	428 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SAC7	P17121	654 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	EXG1	P23776	448 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	RBK1	P25332	333 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	COQ3	P27680	312 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MCM5	P29496	775 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	PTM1	P32857	523 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	TOD6	P34219	525 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	UPS2	P35200	230 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	PHD1	P36093	366 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	AVT5	P38176	459 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SMB1	P40018	196 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	PIC2	P40035	300 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	PUG1	P40100	303 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	ELO3	P40319	345 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	OYE3	P41816	400 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	REF2	P42073	533 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	MNN5	P46982	586 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YJL171C	P46992	396 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YNL010W	P53981	241 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	HXT15	P54854	567 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	UTP6	Q02354	440 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	PLB2	Q03674	706 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MUS81	Q04149	632 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	SIZ1	Q04195	904 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	TMN2	Q04562	672 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	PUS5	Q06244	254 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	TPO3	Q06451	622 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	CUR1	Q06469	252 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SLD7	Q08457	257 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SPC3	Q12133	184 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YPL150W	Q12152	901 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YPR1	Q12458	312 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	STE2	D6VTK4	431 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YBR085C-A	O43137	85 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	PPR1	P07272	904 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	EST1	P17214	699 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	YCP4	P25349	247 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	POF1	P25576	258 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	ERG9	P29704	444 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	HXT4	P32467	576 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SRB5	P32585	307 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	ABD1	P32783	436 aa	Predicted RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	FRE1	P32791	686 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MNS1	P32906	549 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SSS1	P35179	80 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	GCS1	P35197	352 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	DOA1	P36037	715 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YKL070W	P36087	169 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	RIB5	P38145	238 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	RRN10	P38204	145 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YPT31	P38555	223 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	YIL067C	P40514	678 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	TOS3	P43637	560 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MNN10	P50108	393 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	GND2	P53319	492 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	INN1	P53901	409 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	GPD1	Q00055	391 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	NUP49	Q02199	472 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	STD1	Q02794	444 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	AGE1	Q04412	482 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	SHH3	Q04487	196 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	APC4	Q04601	652 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YMR226C	Q05016	267 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	YDR278C	Q05612	105 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	YLR225C	Q05948	407 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	YPS7	Q06325	596 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	MRX9	Q07349	420 aa	Known RBP	4.11	□□□□□ -1.75
SSB1	YDL229W	RTT109	Q07794	436 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	FRA1	Q07825	749 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	FMP25	Q08023	583 aa		4.11	□□□□□ -1.75
SSB1	YDL229W	REP2	P03872	296 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	RPP1B	P10622	106 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	SCL1	P21243	252 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	MSN1	P22148	382 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	CHA1	P25379	360 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	CYS4	P32582	507 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	DAD2	P36162	133 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	DER1	P38307	211 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	IPI1	P38803	334 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	RPF1	P38805	295 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	COG3	P40094	801 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	SMK1	P41808	388 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	VNX1	P42839	908 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	LSB3	P43603	459 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	PFD1	P46988	109 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	PNC1	P53184	216 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	YGR126W	P53274	230 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	MRPS35	P53292	345 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	YNL140C	P53910	189 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	SNO1	Q03144	224 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	BUD20	Q08004	166 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	NMD4	Q12129	218 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	MDM32	Q12171	622 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	RKI1	Q12189	258 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms