RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W NFU1P32860 256 aa1.54□□□□□ -2.16
TRM3YDL112W YOR062CP36025 268 aa1.54□□□□□ -2.16
TRM3YDL112W ETR1P38071 380 aa1.54□□□□□ -2.16
TRM3YDL112W EFM1P38732 585 aa1.54□□□□□ -2.16
TRM3YDL112W TRR2P38816 342 aa1.54□□□□□ -2.16
TRM3YDL112W YDR089WP38966 869 aa1.54□□□□□ -2.16
TRM3YDL112W YMR144WP40214 342 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W AXL1P40851 1208 aa1.54□□□□□ -2.16
TRM3YDL112W EMC2P47133 292 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W YGR067CP53243 804 aa1.54□□□□□ -2.16
TRM3YDL112W RHO5P53879 331 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W YLR460CP54007 376 aa1.54□□□□□ -2.16
TRM3YDL112W RPL15BP54780 204 aaPredicted RBP1.54□□□□□ -2.16
TRM3YDL112W OAZ1Q02803 292 aa1.54□□□□□ -2.16
TRM3YDL112W CGI121Q03705 181 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W DCR2Q05924 578 aa1.54□□□□□ -2.16
TRM3YDL112W BOP2Q06150 570 aa1.54□□□□□ -2.16
TRM3YDL112W CYK3Q07533 885 aa1.54□□□□□ -2.16
TRM3YDL112W YPL245WQ12179 454 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W RUP1Q12242 671 aa1.54□□□□□ -2.16
TRM3YDL112W YMR030W-AQ3E760 96 aa1.54□□□□□ -2.16
TRM3YDL112W MRPL25P23369 157 aa1.54□□□□□ -2.16
TRM3YDL112W OCA4P25366 362 aa1.54□□□□□ -2.16
TRM3YDL112W PHO91P27514 894 aa1.54□□□□□ -2.16
TRM3YDL112W MNN2P38069 597 aa1.54□□□□□ -2.16
TRM3YDL112W YGP1P38616 354 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W RIC1P40395 1056 aa1.54□□□□□ -2.16
TRM3YDL112W YPL068CQ02749 293 aa1.54□□□□□ -2.16
TRM3YDL112W HLR1Q04429 423 aa1.54□□□□□ -2.16
TRM3YDL112W SNO4Q04902 237 aa1.54□□□□□ -2.16
TRM3YDL112W COS7Q07788 383 aa1.54□□□□□ -2.16
TRM3YDL112W UAF30Q08747 228 aa1.54□□□□□ -2.16
TRM3YDL112W HSP33Q08914 237 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W HSP32Q08992 237 aa1.54□□□□□ -2.16
TRM3YDL112W YPR011CQ12251 326 aa1.54□□□□□ -2.16
TRM3YDL112W TAD3Q9URQ3 322 aa1.54□□□□□ -2.16
TRM3YDL112W TRA1P38811 3744 aa1.54□□□□□ -2.16
TRM3YDL112W MSS18P08593 268 aa1.54□□□□□ -2.16
TRM3YDL112W SRV2P17555 526 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W TRX3P25372 127 aa1.54□□□□□ -2.16
TRM3YDL112W MSN2P33748 704 aa1.54□□□□□ -2.16
TRM3YDL112W BNA4P38169 460 aa1.54□□□□□ -2.16
TRM3YDL112W ECO1P43605 281 aa1.54□□□□□ -2.16
TRM3YDL112W PGU1P47180 361 aa1.54□□□□□ -2.16
TRM3YDL112W SKI8Q02793 397 aaPredicted RBP1.54□□□□□ -2.16
TRM3YDL112W HPT1Q04178 221 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W YMR111CQ04461 462 aaPredicted RBP1.54□□□□□ -2.16
TRM3YDL112W ATG38Q05789 226 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W YPR147CQ06522 304 aaKnown RBP1.54□□□□□ -2.16
TRM3YDL112W MDM32Q12171 622 aa1.54□□□□□ -2.16
TRM3YDL112W RRP36Q12481 300 aaPredicted RBP1.54□□□□□ -2.16
TRM3YDL112W MSS116P15424 664 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W DAP2P18962 818 aa1.53□□□□□ -2.16
TRM3YDL112W RPB5P20434 215 aa1.53□□□□□ -2.16
TRM3YDL112W MXR2P25566 168 aa1.53□□□□□ -2.16
TRM3YDL112W PAP1P29468 568 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W MFT1P33441 392 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W RSM22P36056 628 aa1.53□□□□□ -2.16
TRM3YDL112W CAF4P36130 643 aa1.53□□□□□ -2.16
TRM3YDL112W YNL320WP42840 284 aa1.53□□□□□ -2.16
TRM3YDL112W AIM22P47051 409 aa1.53□□□□□ -2.16
TRM3YDL112W EFM5P53200 248 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W GTR2P53290 341 aa1.53□□□□□ -2.16
TRM3YDL112W SNF12P53628 566 aa1.53□□□□□ -2.16
TRM3YDL112W APC4Q04601 652 aa1.53□□□□□ -2.16
TRM3YDL112W YDR124WQ04608 324 aa1.53□□□□□ -2.16
TRM3YDL112W PSR1Q07800 427 aa1.53□□□□□ -2.16
TRM3YDL112W PML1Q07930 204 aaPredicted RBP1.53□□□□□ -2.16
TRM3YDL112W GPN2Q08726 347 aaPredicted RBP1.53□□□□□ -2.16
TRM3YDL112W YAP1P19880 650 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W DBR1P24309 405 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W YIM1P28625 365 aa1.53□□□□□ -2.16
TRM3YDL112W LHS1P36016 881 aa1.53□□□□□ -2.16
TRM3YDL112W RIM2P38127 377 aa1.53□□□□□ -2.16
TRM3YDL112W OLA1P38219 394 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W HSM3P38348 480 aa1.53□□□□□ -2.16
TRM3YDL112W PRE6P40303 254 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W YJL068CP40363 299 aa1.53□□□□□ -2.16
TRM3YDL112W PEF1P53238 335 aa1.53□□□□□ -2.16
TRM3YDL112W RMI1Q02685 241 aa1.53□□□□□ -2.16
TRM3YDL112W URC2Q04411 772 aa1.53□□□□□ -2.16
TRM3YDL112W YLR446WQ06204 433 aa1.53□□□□□ -2.16
TRM3YDL112W SEC10Q06245 871 aa1.53□□□□□ -2.16
TRM3YDL112W YET3Q07451 203 aa1.53□□□□□ -2.16
TRM3YDL112W UBX3Q12229 455 aa1.53□□□□□ -2.16
TRM3YDL112W NOT5Q12514 560 aaPredicted RBP1.53□□□□□ -2.16
TRM3YDL112W YPL247CQ12523 523 aa1.53□□□□□ -2.16
TRM3YDL112W CBP6P07253 162 aaPredicted RBP1.53□□□□□ -2.16
TRM3YDL112W KSS1P14681 368 aa1.53□□□□□ -2.16
TRM3YDL112W REC107P21651 314 aa1.53□□□□□ -2.16
TRM3YDL112W VPS21P36017 210 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W OM14P38325 134 aa1.53□□□□□ -2.16
TRM3YDL112W UTP25P40498 721 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W PHB1P40961 287 aa1.53□□□□□ -2.16
TRM3YDL112W MIC19P43594 170 aa1.53□□□□□ -2.16
TRM3YDL112W KEL2P50090 882 aa1.53□□□□□ -2.16
TRM3YDL112W CPR8P53728 308 aa1.53□□□□□ -2.16
TRM3YDL112W MRPL19P53875 158 aa1.53□□□□□ -2.16
TRM3YDL112W SUB1P54000 292 aaKnown RBP1.53□□□□□ -2.16
TRM3YDL112W YML122CQ03207 126 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 119.2 ms