RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W MTR10Q99189 972 aa2.11□□□□□ -2.07
MCD1YDL003W APC1P53886 1748 aa2.1□□□□□ -2.07
MCD1YDL003W KIN28P06242 306 aa2.1□□□□□ -2.07
MCD1YDL003W SPT3P06844 337 aa2.1□□□□□ -2.07
MCD1YDL003W SPS4P09937 338 aa2.1□□□□□ -2.07
MCD1YDL003W PCK1P10963 549 aa2.1□□□□□ -2.07
MCD1YDL003W ZWF1P11412 505 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W FUS3P16892 353 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W UGA1P17649 471 aa2.1□□□□□ -2.07
MCD1YDL003W AAC3P18238 307 aa2.1□□□□□ -2.07
MCD1YDL003W COQ1P18900 473 aa2.1□□□□□ -2.07
MCD1YDL003W MAK31P23059 88 aa2.1□□□□□ -2.07
MCD1YDL003W RNA15P25299 296 aaPredicted RBP2.1□□□□□ -2.07
MCD1YDL003W PPZ1P26570 692 aa2.1□□□□□ -2.07
MCD1YDL003W APE2P32454 952 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W AEP1P32493 518 aa2.1□□□□□ -2.07
MCD1YDL003W SSS1P35179 80 aa2.1□□□□□ -2.07
MCD1YDL003W YBR241CP38142 488 aa2.1□□□□□ -2.07
MCD1YDL003W GPX2P38143 162 aa2.1□□□□□ -2.07
MCD1YDL003W LAG1P38703 411 aa2.1□□□□□ -2.07
MCD1YDL003W YHR045WP38775 560 aa2.1□□□□□ -2.07
MCD1YDL003W YHK8P38776 514 aa2.1□□□□□ -2.07
MCD1YDL003W YHR131CP38835 850 aa2.1□□□□□ -2.07
MCD1YDL003W IPT1P38954 527 aa2.1□□□□□ -2.07
MCD1YDL003W SUR2P38992 349 aa2.1□□□□□ -2.07
MCD1YDL003W FHL1P39521 936 aa2.1□□□□□ -2.07
MCD1YDL003W SCC4P40090 624 aa2.1□□□□□ -2.07
MCD1YDL003W YIL054WP40524 105 aa2.1□□□□□ -2.07
MCD1YDL003W YKE4P40544 346 aa2.1□□□□□ -2.07
MCD1YDL003W GLC8P41818 229 aa2.1□□□□□ -2.07
MCD1YDL003W GNA1P43577 159 aaPredicted RBP2.1□□□□□ -2.07
MCD1YDL003W ADO1P47143 340 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W PUS4P48567 403 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W YGL138CP53122 345 aa2.1□□□□□ -2.07
MCD1YDL003W POP6P53218 158 aa2.1□□□□□ -2.07
MCD1YDL003W SSU72P53538 206 aaPredicted RBP2.1□□□□□ -2.07
MCD1YDL003W ARE2P53629 642 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W MNT4P53745 580 aa2.1□□□□□ -2.07
MCD1YDL003W YNL146WP53906 100 aa2.1□□□□□ -2.07
MCD1YDL003W YNL033WP53964 284 aa2.1□□□□□ -2.07
MCD1YDL003W YNL019CP53975 284 aa2.1□□□□□ -2.07
MCD1YDL003W YNL010WP53981 241 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W YCL001W-AP87012 153 aa2.1□□□□□ -2.07
MCD1YDL003W MAK3Q03503 176 aa2.1□□□□□ -2.07
MCD1YDL003W ENT5Q03769 411 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W HSP31Q04432 237 aa2.1□□□□□ -2.07
MCD1YDL003W MYO5Q04439 1219 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W RTT103Q05543 409 aa2.1□□□□□ -2.07
MCD1YDL003W PEX27Q08580 376 aa2.1□□□□□ -2.07
MCD1YDL003W UAF30Q08747 228 aa2.1□□□□□ -2.07
MCD1YDL003W FRE3Q08905 711 aa2.1□□□□□ -2.07
MCD1YDL003W YOR283WQ12040 230 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W PSF3Q12146 194 aa2.1□□□□□ -2.07
MCD1YDL003W YLR046CQ12253 270 aa2.1□□□□□ -2.07
MCD1YDL003W DGK1Q12382 290 aa2.1□□□□□ -2.07
MCD1YDL003W PAA1Q12447 191 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W YOL159C-AQ3E769 90 aa2.1□□□□□ -2.07
MCD1YDL003W SEC7P11075 2009 aaKnown RBP2.1□□□□□ -2.07
MCD1YDL003W ARG81P05085 880 aa2.09□□□□□ -2.07
MCD1YDL003W RAD52P06778 471 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W RAD7P06779 565 aa2.09□□□□□ -2.07
MCD1YDL003W PEP4P07267 405 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W MIS1P09440 975 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W MRP1P10662 321 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W SEC12P11655 471 aa2.09□□□□□ -2.07
MCD1YDL003W TCP1P12612 559 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W EST1P17214 699 aaPredicted RBP2.09□□□□□ -2.07
MCD1YDL003W SLY1P22213 666 aa2.09□□□□□ -2.07
MCD1YDL003W YCK1P23291 538 aa2.09□□□□□ -2.07
MCD1YDL003W MNE1P24720 663 aa2.09□□□□□ -2.07
MCD1YDL003W YIM1P28625 365 aa2.09□□□□□ -2.07
MCD1YDL003W LDS1P31379 325 aa2.09□□□□□ -2.07
MCD1YDL003W PHA2P32452 334 aa2.09□□□□□ -2.07
MCD1YDL003W LHP1P33399 275 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W SNU114P36048 1008 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W RIM2P38127 377 aa2.09□□□□□ -2.07
MCD1YDL003W MAL32P38158 584 aa2.09□□□□□ -2.07
MCD1YDL003W YBR137WP38276 179 aa2.09□□□□□ -2.07
MCD1YDL003W SHG1P38337 142 aa2.09□□□□□ -2.07
MCD1YDL003W ARN1P38731 627 aa2.09□□□□□ -2.07
MCD1YDL003W YHR054CP38780 354 aa2.09□□□□□ -2.07
MCD1YDL003W SAW1P39735 261 aa2.09□□□□□ -2.07
MCD1YDL003W AVT2P39981 480 aa2.09□□□□□ -2.07
MCD1YDL003W LSM5P40089 93 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W HIS6P40545 261 aa2.09□□□□□ -2.07
MCD1YDL003W YIR035CP40579 254 aa2.09□□□□□ -2.07
MCD1YDL003W CHS6P40955 746 aa2.09□□□□□ -2.07
MCD1YDL003W YGR201CP42936 225 aa2.09□□□□□ -2.07
MCD1YDL003W DUG1P43616 481 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W YGR153WP48238 217 aa2.09□□□□□ -2.07
MCD1YDL003W STR3P53101 465 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W ERV14P53173 138 aa2.09□□□□□ -2.07
MCD1YDL003W CLD1P53264 445 aa2.09□□□□□ -2.07
MCD1YDL003W MAL12P53341 584 aa2.09□□□□□ -2.07
MCD1YDL003W RRN9P53437 365 aa2.09□□□□□ -2.07
MCD1YDL003W HHO1P53551 258 aa2.09□□□□□ -2.07
MCD1YDL003W ARK1P53974 638 aa2.09□□□□□ -2.07
MCD1YDL003W ASI3P53983 676 aa2.09□□□□□ -2.07
MCD1YDL003W NUP116Q02630 1113 aa2.09□□□□□ -2.07
MCD1YDL003W SMA1Q02651 245 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms