RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	TAF6	P53040	516 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	SLX9	P53251	210 aa	Predicted RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	MPS1	P54199	764 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	ERG13	P54839	491 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	STP1	Q00947	519 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	GIP3	Q03016	1276 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	RVB1	Q03940	463 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	NNT1	Q05874	261 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	BER1	Q06688	274 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	YPQ1	Q12010	308 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	YLR108C	Q12259	485 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	ERP3	Q12403	225 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	RPL35A	P0CX84	120 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	RPL35B	P0CX85	120 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	FBA1	P14540	359 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	MXR2	P25566	168 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	ZUO1	P32527	433 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	MYO3	P36006	1272 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	RTC3	P38804	111 aa	Predicted RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	FHL1	P39521	936 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	SYG1	P40528	902 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	AIM24	P47127	394 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	SSN8	P47821	323 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	IMD3	P50095	523 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	YGL159W	P53110	370 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	BIO4	P53630	237 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	IDP3	P53982	420 aa	Known RBP	4.64	□□□□□ -1.67
ECM1	YAL059W	SPC2	Q04969	178 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	CDC123	Q05791	360 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	YOR365C	Q08844	703 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	YOR389W	Q08912	624 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	GPM2	Q12008	311 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	YLR049C	Q12110	428 aa		4.64	□□□□□ -1.67
ECM1	YAL059W	TEF1	P02994	458 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	RAD1	P06777	1100 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	YBR121C-A	P0C5L4	52 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	REV1	P12689	985 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	MAK32	P23060	363 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	TKL1	P23254	680 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	SAC1	P32368	623 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	SKN1	P33336	771 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	POP7	P38291	140 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	YNL194C	P40169	301 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	MMF1	P40185	145 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	SNZ3	P43545	298 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	UBP8	P50102	471 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	CWC23	P52868	283 aa	Predicted RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	SEH1	P53011	349 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	ZRG17	P53735	605 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	SNZ2	P53824	298 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	SNU56	Q03782	492 aa	Known RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	YDR387C	Q04162	555 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	NAT4	Q04751	285 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	FAR8	Q05040	523 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	SNT309	Q06091	175 aa	Predicted RBP	4.63	□□□□□ -1.67
ECM1	YAL059W	ATG17	Q06410	417 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	YDL144C	Q07589	356 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	LDS2	Q08218	356 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	GRE1	Q08969	168 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	YLL056C	Q12177	298 aa		4.63	□□□□□ -1.67
ECM1	YAL059W	MES1	P00958	751 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	HTB1	P02293	131 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	HTB2	P02294	131 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	RAD52	P06778	471 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	ARF1	P11076	181 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	POX1	P13711	748 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	APE2	P32454	952 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	RAD24	P32641	659 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	MNS1	P32906	549 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	SWD2	P36104	329 aa	Predicted RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	ISC1	P40015	477 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	AGP3	P43548	558 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	TRS85	P46944	698 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	TMA22	P47089	198 aa	Predicted RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	PKP2	P53170	491 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	GET1	P53192	235 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	NOP19	P53317	196 aa	Predicted RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	YPR003C	P53394	754 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	YTP1	P53584	459 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	SMM1	P53720	384 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	EAF7	P53911	425 aa	Known RBP	4.62	□□□□□ -1.67
ECM1	YAL059W	OST6	Q03723	332 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	ECM11	Q04110	302 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	ATG26	Q06321	1198 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	ASA1	Q06822	443 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	YKL183C-A	Q3E765	70 aa		4.62	□□□□□ -1.67
ECM1	YAL059W	HIS4	P00815	799 aa	Known RBP	4.61	□□□□□ -1.67
ECM1	YAL059W	SNF3	P10870	884 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	YAP1	P19880	650 aa	Known RBP	4.61	□□□□□ -1.67
ECM1	YAL059W	YMR31	P19955	123 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
ECM1	YAL059W	IES6	P32617	166 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	MRPS5	P33759	307 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	ROT2	P38138	954 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	TDA11	P38854	504 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	ERV46	P39727	415 aa		4.61	□□□□□ -1.67
ECM1	YAL059W	THO1	P40040	218 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 127.9 ms