RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C GIM3P53900 129 aa3.82□□□□□ -1.8
PTA1YAL043C RPL34AP87262 121 aaPredicted RBP3.82□□□□□ -1.8
PTA1YAL043C CTL1Q03220 320 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C DML1Q03652 475 aa3.82□□□□□ -1.8
PTA1YAL043C YMR252CQ04814 134 aa3.82□□□□□ -1.8
PTA1YAL043C NMA1Q06178 401 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C YPR196WQ06595 470 aa3.82□□□□□ -1.8
PTA1YAL043C SPC3Q12133 184 aa3.82□□□□□ -1.8
PTA1YAL043C WTM2Q12206 467 aa3.82□□□□□ -1.8
PTA1YAL043C YOR019WQ99248 730 aa3.82□□□□□ -1.8
PTA1YAL043C AAC1P04710 309 aa3.82□□□□□ -1.8
PTA1YAL043C CPR2P23285 205 aa3.82□□□□□ -1.8
PTA1YAL043C HYM1P32464 399 aa3.82□□□□□ -1.8
PTA1YAL043C PET127P32606 800 aa3.82□□□□□ -1.8
PTA1YAL043C AFR1P33304 620 aa3.82□□□□□ -1.8
PTA1YAL043C SKN1P33336 771 aa3.82□□□□□ -1.8
PTA1YAL043C SHE1P38200 338 aa3.82□□□□□ -1.8
PTA1YAL043C IFA38P38286 347 aa3.82□□□□□ -1.8
PTA1YAL043C YBR242WP38331 238 aa3.82□□□□□ -1.8
PTA1YAL043C YGR201CP42936 225 aa3.82□□□□□ -1.8
PTA1YAL043C YGR210CP42942 411 aa3.82□□□□□ -1.8
PTA1YAL043C PAC10P48363 199 aa3.82□□□□□ -1.8
PTA1YAL043C MPS2P53159 387 aa3.82□□□□□ -1.8
PTA1YAL043C IMO32P53219 342 aa3.82□□□□□ -1.8
PTA1YAL043C AQR1P53943 586 aa3.82□□□□□ -1.8
PTA1YAL043C INP1Q03694 420 aa3.82□□□□□ -1.8
PTA1YAL043C TRM82Q03774 444 aa3.82□□□□□ -1.8
PTA1YAL043C CTK1Q03957 528 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C DLT1Q04216 342 aa3.82□□□□□ -1.8
PTA1YAL043C MFB1Q04922 465 aa3.82□□□□□ -1.8
PTA1YAL043C RNH202Q05635 350 aa3.82□□□□□ -1.8
PTA1YAL043C ENV7Q12003 364 aa3.82□□□□□ -1.8
PTA1YAL043C TGL5Q12043 749 aa3.82□□□□□ -1.8
PTA1YAL043C BAG7Q12128 409 aa3.82□□□□□ -1.8
PTA1YAL043C MRX4Q12467 430 aa3.82□□□□□ -1.8
PTA1YAL043C PNO1Q99216 274 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C SOD2P00447 233 aa3.81□□□□□ -1.8
PTA1YAL043C LAT1P12695 482 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C APA1P16550 321 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C RPS1BP23248 255 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C YCR100CP25606 316 aa3.81□□□□□ -1.8
PTA1YAL043C VMA8P32610 256 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C IML3P38265 245 aa3.81□□□□□ -1.8
PTA1YAL043C RPS20P38701 121 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C DED81P38707 554 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C DBP8P38719 431 aa3.81□□□□□ -1.8
PTA1YAL043C OSH7P38755 437 aa3.81□□□□□ -1.8
PTA1YAL043C YHR122WP38829 231 aa3.81□□□□□ -1.8
PTA1YAL043C FMP52P40008 231 aa3.81□□□□□ -1.8
PTA1YAL043C SER3P40054 469 aa3.81□□□□□ -1.8
PTA1YAL043C PKP1P40530 394 aa3.81□□□□□ -1.8
PTA1YAL043C YJR120WP47157 116 aa3.81□□□□□ -1.8
PTA1YAL043C PPT1P53043 513 aa3.81□□□□□ -1.8
PTA1YAL043C BSC5P53755 489 aa3.81□□□□□ -1.8
PTA1YAL043C YLR173WQ06247 608 aa3.81□□□□□ -1.8
PTA1YAL043C YPL272CQ08984 517 aa3.81□□□□□ -1.8
PTA1YAL043C YOR012WQ12351 137 aa3.81□□□□□ -1.8
PTA1YAL043C TY1A-NL1Q12391 440 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C ATG31Q12421 196 aa3.81□□□□□ -1.8
PTA1YAL043C LAG2Q92325 660 aa3.81□□□□□ -1.8
PTA1YAL043C MTF1P14908 341 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C MDH1P17505 334 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
PTA1YAL043C DBP3P20447 523 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C RNA14P25298 677 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C YCP4P25349 247 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C ARE1P25628 610 aa3.81□□□□□ -1.8
PTA1YAL043C HOM6P31116 359 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C LST4P34239 828 aa3.81□□□□□ -1.8
PTA1YAL043C AUR1P36107 401 aaPredicted RBP3.81□□□□□ -1.8
PTA1YAL043C VPS51P36116 164 aa3.81□□□□□ -1.8
PTA1YAL043C RRN10P38204 145 aa3.81□□□□□ -1.8
PTA1YAL043C CHS7P38843 316 aa3.81□□□□□ -1.8
PTA1YAL043C GIM4P40005 111 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C PHM8P40025 321 aa3.81□□□□□ -1.8
PTA1YAL043C DDI1P40087 428 aa3.81□□□□□ -1.8
PTA1YAL043C TED1P40533 473 aa3.81□□□□□ -1.8
PTA1YAL043C YJL218WP40892 196 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C RPL10P41805 221 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C YFR020WP43600 232 aa3.81□□□□□ -1.8
PTA1YAL043C STE24P47154 453 aa3.81□□□□□ -1.8
PTA1YAL043C GOR1P53839 350 aa3.81□□□□□ -1.8
PTA1YAL043C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
PTA1YAL043C YPL068CQ02749 293 aa3.81□□□□□ -1.8
PTA1YAL043C OAZ1Q02803 292 aa3.81□□□□□ -1.8
PTA1YAL043C GIP3Q03016 1276 aa3.81□□□□□ -1.8
PTA1YAL043C ASR1Q06834 288 aa3.81□□□□□ -1.8
PTA1YAL043C RRP40Q08285 240 aaKnown RBP3.81□□□□□ -1.8
PTA1YAL043C NMD4Q12129 218 aa3.81□□□□□ -1.8
PTA1YAL043C RRP42Q12277 265 aaPredicted RBP3.81□□□□□ -1.8
PTA1YAL043C YPR1Q12458 312 aa3.81□□□□□ -1.8
PTA1YAL043C SPT15P13393 240 aaKnown RBP3.8□□□□□ -1.8
PTA1YAL043C SNF6P18888 332 aa3.8□□□□□ -1.8
PTA1YAL043C TAH1P25638 111 aaPredicted RBP3.8□□□□□ -1.8
PTA1YAL043C RFA2P26754 273 aaKnown RBP3.8□□□□□ -1.8
PTA1YAL043C RPC34P32910 317 aa3.8□□□□□ -1.8
PTA1YAL043C NIC96P34077 839 aa3.8□□□□□ -1.8
PTA1YAL043C YPT52P36018 234 aaKnown RBP3.8□□□□□ -1.8
PTA1YAL043C SNU114P36048 1008 aaKnown RBP3.8□□□□□ -1.8
PTA1YAL043C ATP3P38077 311 aaKnown RBP3.8□□□□□ -1.8
PTA1YAL043C BNA4P38169 460 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms