RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KCND2Q9NZV8 630 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 IGKV6-21A0A0C4DH24 114 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 MYMKA6NI61 221 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 MAGEB2O15479 319 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 C22orf31O95567 290 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 KLRC1P26715 233 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 CDK7P50613 346 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 POLGP54098 1239 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 AMPD3Q01432 767 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 TBC1D8BQ0IIM8 1120 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 MTHFD1LQ6UB35 978 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 EXOC8Q8IYI6 725 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 ZBTB10Q96DT7 871 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 XPNPEP1Q9NQW7 623 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
CSNK1D-212ENST00000580061 MBLAC1A4D2B0 266 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 TREHO43280 583 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 GUCY2CP25092 1073 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 AFMP43652 599 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 EMC2Q15006 297 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 UBE2Q1Q7Z7E8 422 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 ELOA2Q8IYF1 753 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 GRAMD1CQ8IYS0 662 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 CCDC34Q96HJ3 373 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 JPH2Q9BR39 696 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 LRRC27Q9C0I9 530 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 ATP6V0A4Q9HBG4 840 aa17.67■□□□□ 0.42
CSNK1D-212ENST00000580061 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 SNX17Q15036 470 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 C1orf53Q5VUE5 145 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 EFCAB12Q6NXP0 572 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 TNS4Q8IZW8 715 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 LINC01465Q8N7H1 131 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 RETREG2Q8NC44 543 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 MCPH1Q8NEM0 835 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 DDX12PQ92771 950 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 C7orf25Q9BPX7 421 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 TIPINQ9BVW5 301 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 TRIM9Q9C026 710 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
CSNK1D-212ENST00000580061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 NPHP3-ACAD11A0A0J9YXS1 232 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 MYL1P05976 194 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 CASP1P29466 404 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 ATN1P54259 1190 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 CUL4BQ13620 913 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 GIT2Q14161 759 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 POSTNQ15063 836 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 PTGISQ16647 500 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 CNNM4Q6P4Q7 775 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 MAEAQ7L5Y9 396 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 DYMQ7RTS9 669 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 LRRC71Q8N4P6 559 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 CTAGE1Q96RT6 745 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 BLZF1Q9H2G9 400 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 SUGCTQ9HAC7 445 aa17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-212ENST00000580061 MKI67P46013 3256 aaKnown RBP17.64■□□□□ 0.42
CSNK1D-212ENST00000580061 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 B4GALT4O60513 344 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 KRT18P05783 430 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 CYP2C9P11712 490 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 SOX10P56693 466 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 MAPK7Q13164 816 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 DRP2Q13474 957 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 RUFY4Q6ZNE9 571 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 FAM126BQ8IXS8 530 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 DAW1Q8N136 415 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 METTL13Q8N6R0 699 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 TMEM143Q96AN5 459 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 POLD4Q9HCU8 107 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 GPRC5CQ9NQ84 441 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 HOOK1Q9UJC3 728 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 ODF2LQ9ULJ1 636 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 MROH7Q68CQ1 1323 aa17.64■□□□□ 0.41
CSNK1D-212ENST00000580061 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 CCDC85CA6NKD9 419 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 RSPH10B2B2RC85 870 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 HIP1RO75146 1068 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 RSPH10BP0C881 870 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 TMOD1P28289 359 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 ARL2P36404 184 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1467.3 ms