RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 KDM3AQ9Y4C1 1321 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 PPME1Q9Y570 386 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 TRPV2Q9Y5S1 764 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 MYH15Q9Y2K3 1946 aa17.33■□□□□ 0.37
RABGGTA-219ENST00000560871 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 ZBTB39O15060 712 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 MAFO75444 373 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 PDIA4P13667 645 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 RPA1P27694 616 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 NPEPPSP55786 919 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 WDR5P61964 334 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 TMEM62Q0P6H9 643 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 PDIA5Q14554 519 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 PLEKHG4Q58EX7 1191 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 ARL6IP4Q66PJ3 421 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 HAUS3Q68CZ6 603 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 DTHD1Q6ZMT9 781 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 HERC6Q8IVU3 1022 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 TPH2Q8IWU9 490 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 NME8Q8N427 588 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 LRWD1Q9UFC0 647 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 MICAL3Q7RTP6 2002 aa17.33■□□□□ 0.36
RABGGTA-219ENST00000560871 ABHD14A-ACY1A0A1B0GW23 586 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 PP2D1A8MPX8 630 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 BMP15O95972 392 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 MUTP22033 750 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 KCNJ6P48051 423 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 DRP2Q13474 957 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 PTPAQ15257 358 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 FBXO47Q5MNV8 452 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 IER5Q5VY09 327 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 POTEGQ6S5H5 508 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 METTL13Q8N6R0 699 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 MMTAG2Q9BU76 263 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 DHX33Q9H6R0 707 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 ANKEF1Q9NU02 776 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
RABGGTA-219ENST00000560871 VTNP04004 478 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 ZSCAN22P10073 491 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 GHRP10912 638 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 RARRES1P49788 294 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 IKBKEQ14164 716 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 BECN1Q14457 450 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 LPIN1Q14693 890 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 ECM1Q16610 540 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 PPP2R2DQ66LE6 453 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 OTUD6AQ7L8S5 288 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 DBF4BQ8NFT6 615 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 SNX29Q8TEQ0 813 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 GAS2L1Q99501 681 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 CELF4Q9BZC1 486 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 SQORQ9Y6N5 450 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 MORC2Q9Y6X9 1032 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 CHD9Q3L8U1 2897 aa17.31■□□□□ 0.36
RABGGTA-219ENST00000560871 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 M0QZ92 97 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 EFCAB14O75071 495 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 GPR32O75388 356 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 F13A1P00488 732 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 CA3P07451 260 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 TMOD1P28289 359 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 RFC5P40937 340 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 DEFB103AP81534 67 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 PIGOQ8TEQ8 1089 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 MAP7D2Q96T17 732 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 AGO3Q9H9G7 860 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 CDHR5Q9HBB8 845 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 AKT3Q9Y243 479 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
RABGGTA-219ENST00000560871 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 CDC25AP30304 524 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 GPC3P51654 580 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 GRIN1Q05586 938 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 TMEM40Q8WWA1 233 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 SLC7A3Q8WY07 619 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 APBB2Q92870 758 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 PPP1R16BQ96T49 567 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 ADAMTS10Q9H324 1103 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 DBR1Q9UK59 544 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-219ENST00000560871 LOXHD1Q8IVV2 1947 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms