RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 RBG1P39729 369 aa1.26□□□□□ -2.21
snR56snR56 MRX11Q03079 207 aa1.26□□□□□ -2.21
snR56snR56 COX3P00420 269 aa1.25□□□□□ -2.21
snR56snR56 SHE1P38200 338 aa1.25□□□□□ -2.21
snR56snR56 GPI16P38875 610 aa1.25□□□□□ -2.21
snR56snR56 SED5Q01590 340 aa1.25□□□□□ -2.21
snR56snR56 YMR155WQ03795 547 aa1.25□□□□□ -2.21
snR56snR56 YDL211CQ12121 372 aa1.25□□□□□ -2.21
snR56snR56 UNG1P12887 359 aa1.24□□□□□ -2.21
snR56snR56 CLC1P17891 233 aa1.24□□□□□ -2.21
snR56snR56 YGR015CP53208 328 aa1.24□□□□□ -2.21
snR56snR56 TIM10P87108 93 aa1.24□□□□□ -2.21
snR56snR56 FLO11P08640 1367 aa1.23□□□□□ -2.21
snR56snR56 COX10P21592 462 aa1.23□□□□□ -2.21
snR56snR56 LDS1P31379 325 aa1.23□□□□□ -2.21
snR56snR56 ECM14P38836 430 aa1.23□□□□□ -2.21
snR56snR56 BDH1P39714 382 aa1.23□□□□□ -2.21
snR56snR56 CIN2P46670 268 aa1.23□□□□□ -2.21
snR56snR56 TRM112P53738 135 aaPredicted RBP1.23□□□□□ -2.21
snR56snR56 SRV2P17555 526 aaKnown RBP1.22□□□□□ -2.21
snR56snR56 MCR1P36060 302 aaKnown RBP1.22□□□□□ -2.21
snR56snR56 SKO1Q02100 647 aa1.22□□□□□ -2.21
snR56snR56 VHS2P40463 436 aa1.21□□□□□ -2.22
snR56snR56 BAT2P47176 376 aaKnown RBP1.21□□□□□ -2.22
snR56snR56 KAP120Q02932 1032 aa1.21□□□□□ -2.22
snR56snR56 FSH2Q05015 223 aa1.21□□□□□ -2.22
snR56snR56 CDD1Q06549 142 aa1.21□□□□□ -2.22
snR56snR56 ATP16Q12165 160 aa1.21□□□□□ -2.22
snR56snR56 CUP2P15315 225 aa1.2□□□□□ -2.22
snR56snR56 CLB1P24868 471 aa1.2□□□□□ -2.22
snR56snR56 TIR2P33890 251 aa1.2□□□□□ -2.22
snR56snR56 YER079WP40052 210 aaKnown RBP1.2□□□□□ -2.22
snR56snR56 MMF1P40185 145 aaKnown RBP1.2□□□□□ -2.22
snR56snR56 ARF3P40994 183 aaRIP-Chip data1.2□□□□□ -2.22not detected
snR56snR56 MNN5P46982 586 aa1.2□□□□□ -2.22
snR56snR56 OCA2P53949 197 aa1.2□□□□□ -2.22
snR56snR56 RPN9Q04062 393 aaKnown RBP1.2□□□□□ -2.22
snR56snR56 YOL029CQ08187 201 aa1.2□□□□□ -2.22
snR56snR56 CLP1Q08685 445 aaPredicted RBP1.2□□□□□ -2.22
snR56snR56 STE2D6VTK4 431 aa1.19□□□□□ -2.22
snR56snR56 DST1P07273 309 aa1.19□□□□□ -2.22
snR56snR56 URA4P20051 364 aa1.19□□□□□ -2.22
snR56snR56 DPB3P27344 201 aa1.19□□□□□ -2.22
snR56snR56 UTP9P38882 575 aaKnown RBP1.19□□□□□ -2.22
snR56snR56 YJR054WP47114 497 aa1.19□□□□□ -2.22
snR56snR56 RRN9P53437 365 aa1.19□□□□□ -2.22
snR56snR56 SMD1Q02260 146 aaPredicted RBP1.19□□□□□ -2.22
snR56snR56 YPL113CQ02961 396 aa1.19□□□□□ -2.22
snR56snR56 API2Q04413 109 aa1.19□□□□□ -2.22
snR56snR56 YKR032WP36127 104 aa1.18□□□□□ -2.22
snR56snR56 TOS2P50078 622 aa1.18□□□□□ -2.22
snR56snR56 YDR131CQ03899 556 aa1.18□□□□□ -2.22
snR56snR56 MEX67Q99257 599 aaKnown RBP1.18□□□□□ -2.22
snR56snR56 HPR1P17629 752 aaKnown RBP1.17□□□□□ -2.22
snR56snR56 CPT1P17898 393 aa1.17□□□□□ -2.22
snR56snR56 BRF1P29056 596 aa1.17□□□□□ -2.22
snR56snR56 YMR262WP38430 313 aa1.17□□□□□ -2.22
snR56snR56 GEP4P38812 185 aa1.17□□□□□ -2.22
snR56snR56 HSH155P49955 971 aaKnown RBP1.17□□□□□ -2.22
snR56snR56 CDH1P53197 566 aa1.17□□□□□ -2.22
snR56snR56 APC4Q04601 652 aa1.17□□□□□ -2.22
snR56snR56 DCS1Q06151 350 aa1.17□□□□□ -2.22
snR56snR56 YOP1Q12402 180 aa1.17□□□□□ -2.22
snR56snR56 YOL159C-AQ3E769 90 aa1.17□□□□□ -2.22
snR56snR56 MET17P06106 444 aa1.16□□□□□ -2.22
snR56snR56 ROX1P25042 368 aa1.16□□□□□ -2.22
snR56snR56 COS9P36034 407 aa1.16□□□□□ -2.22
snR56snR56 STE24P47154 453 aa1.16□□□□□ -2.22
snR56snR56 SHE4P51534 789 aa1.16□□□□□ -2.22
snR56snR56 PRM1P53835 661 aa1.16□□□□□ -2.22
snR56snR56 RTN2Q12443 393 aa1.16□□□□□ -2.22
snR56snR56 SAS3P34218 831 aa1.15□□□□□ -2.23
snR56snR56 GGC1P38988 300 aa1.15□□□□□ -2.23
snR56snR56 ABM1P47146 123 aa1.15□□□□□ -2.23
snR56snR56 NAS6P50086 228 aa1.15□□□□□ -2.23
snR56snR56 PRP42Q03776 544 aaKnown RBP1.15□□□□□ -2.23
snR56snR56 RLP24Q07915 199 aaKnown RBP1.15□□□□□ -2.23
snR56snR56 TDH2P00358 332 aaKnown RBP1.14□□□□□ -2.23
snR56snR56 TDH3P00359 332 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
snR56snR56 HEM4P06174 275 aa1.14□□□□□ -2.23
snR56snR56 PCL7P40186 285 aa1.14□□□□□ -2.23
snR56snR56 CAK1P43568 368 aaPredicted RBP1.14□□□□□ -2.23
snR56snR56 ROG1P53118 685 aa1.14□□□□□ -2.23
snR56snR56 ARX1Q03862 593 aaKnown RBP1.14□□□□□ -2.23
snR56snR56 YMR130WQ04223 302 aa1.14□□□□□ -2.23
snR56snR56 GMC1Q04399 608 aa1.14□□□□□ -2.23
snR56snR56 RUP1Q12242 671 aa1.14□□□□□ -2.23
snR56snR56 PRP46Q12417 451 aaPredicted RBP1.14□□□□□ -2.23
snR56snR56 MET2P08465 486 aa1.13□□□□□ -2.23
snR56snR56 IMP2'P32351 346 aa1.13□□□□□ -2.23
snR56snR56 TIP20P33891 701 aa1.13□□□□□ -2.23
snR56snR56 SMC2P38989 1170 aaKnown RBP1.13□□□□□ -2.23
snR56snR56 YMR010WQ03687 405 aa1.13□□□□□ -2.23
snR56snR56 GTO3Q04806 366 aa1.13□□□□□ -2.23
snR56snR56 PIB2P53191 635 aa1.12□□□□□ -2.23
snR56snR56 CKA1P15790 372 aa1.11□□□□□ -2.23
snR56snR56 DAL81P21657 970 aa1.11□□□□□ -2.23
snR56snR56 TOA2P32774 122 aa1.11□□□□□ -2.23
snR56snR56 MED6P38782 295 aa1.11□□□□□ -2.23
snR56snR56 DON1Q05610 365 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 92.9 ms