RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W ASC1P38011 319 aaKnown RBP3.4□□□□□ -1.86
MSD1YPL104W ECM8P38246 354 aa3.4□□□□□ -1.86
MSD1YPL104W YBR138CP38277 524 aa3.4□□□□□ -1.86
MSD1YPL104W FMO1P38866 432 aa3.4□□□□□ -1.86
MSD1YPL104W PFS1P38872 237 aa3.4□□□□□ -1.86
MSD1YPL104W MET30P39014 640 aa3.4□□□□□ -1.86
MSD1YPL104W PLB1P39105 664 aa3.4□□□□□ -1.86
MSD1YPL104W TIF34P40217 347 aaKnown RBP3.4□□□□□ -1.86
MSD1YPL104W MSS2P40990 351 aa3.4□□□□□ -1.86
MSD1YPL104W RAD17P48581 401 aa3.4□□□□□ -1.86
MSD1YPL104W RBG2P53295 368 aaKnown RBP3.4□□□□□ -1.86
MSD1YPL104W OAZ1Q02803 292 aa3.4□□□□□ -1.86
MSD1YPL104W YMR099CQ03161 297 aaKnown RBP3.4□□□□□ -1.86
MSD1YPL104W PRP3Q03338 469 aaPredicted RBP3.4□□□□□ -1.86
MSD1YPL104W SMP3Q04174 516 aa3.4□□□□□ -1.86
MSD1YPL104W ASM4Q05166 528 aa3.4□□□□□ -1.86
MSD1YPL104W VID22Q05934 901 aa3.4□□□□□ -1.86
MSD1YPL104W TEN1Q07921 160 aa3.4□□□□□ -1.86
MSD1YPL104W RRP40Q08285 240 aaKnown RBP3.4□□□□□ -1.86
MSD1YPL104W YPR064WQ12492 139 aa3.4□□□□□ -1.86
MSD1YPL104W COX3P00420 269 aa3.4□□□□□ -1.87
MSD1YPL104W STE7P06784 515 aa3.4□□□□□ -1.87
MSD1YPL104W PUT2P07275 575 aa3.4□□□□□ -1.87
MSD1YPL104W HOM2P13663 365 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W CBS2P14905 389 aa3.4□□□□□ -1.87
MSD1YPL104W MER1P16523 270 aa3.4□□□□□ -1.87
MSD1YPL104W FUR1P18562 216 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W DBP3P20447 523 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W URE2P23202 354 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W SFC1P33303 322 aa3.4□□□□□ -1.87
MSD1YPL104W PIM1P36775 1133 aa3.4□□□□□ -1.87
MSD1YPL104W MNN2P38069 597 aa3.4□□□□□ -1.87
MSD1YPL104W BNA4P38169 460 aa3.4□□□□□ -1.87
MSD1YPL104W IFA38P38286 347 aa3.4□□□□□ -1.87
MSD1YPL104W YHR033WP38690 423 aa3.4□□□□□ -1.87
MSD1YPL104W YHR112CP38716 378 aa3.4□□□□□ -1.87
MSD1YPL104W GOS1P38736 223 aa3.4□□□□□ -1.87
MSD1YPL104W EGD2P38879 174 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W YAL037WP39728 267 aa3.4□□□□□ -1.87
MSD1YPL104W NOP16P40007 231 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W ZIM17P42844 174 aa3.4□□□□□ -1.87
MSD1YPL104W PAC10P48363 199 aa3.4□□□□□ -1.87
MSD1YPL104W MNN10P50108 393 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W ROG1P53118 685 aa3.4□□□□□ -1.87
MSD1YPL104W YGR250CP53316 781 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W YNL181WP53878 407 aa3.4□□□□□ -1.87
MSD1YPL104W RHO3Q00245 231 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W SWP1Q02795 286 aa3.4□□□□□ -1.87
MSD1YPL104W RRP45Q05636 305 aaKnown RBP3.4□□□□□ -1.87
MSD1YPL104W SPO77Q06134 477 aa3.4□□□□□ -1.87
MSD1YPL104W SWA2Q06677 668 aa3.4□□□□□ -1.87
MSD1YPL104W BRE4Q07660 1125 aa3.4□□□□□ -1.87
MSD1YPL104W SFM1Q12314 213 aa3.4□□□□□ -1.87
MSD1YPL104W GLE1Q12315 538 aa3.4□□□□□ -1.87
MSD1YPL104W YLR111WQ12528 110 aa3.4□□□□□ -1.87
MSD1YPL104W MHF1Q3E835 90 aa3.4□□□□□ -1.87
MSD1YPL104W RIB3Q99258 208 aa3.4□□□□□ -1.87
MSD1YPL104W MF(ALPHA)1P01149 165 aa3.39□□□□□ -1.87
MSD1YPL104W TPK3P05986 398 aa3.39□□□□□ -1.87
MSD1YPL104W RED1P14291 827 aa3.39□□□□□ -1.87
MSD1YPL104W RPS1BP23248 255 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W BUB3P26449 341 aa3.39□□□□□ -1.87
MSD1YPL104W RPS5P26783 225 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W MKK1P32490 508 aa3.39□□□□□ -1.87
MSD1YPL104W GDH2P33327 1092 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W NUF2P33895 451 aa3.39□□□□□ -1.87
MSD1YPL104W SCO2P38072 301 aa3.39□□□□□ -1.87
MSD1YPL104W ZTA1P38230 334 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W SIC1P38634 284 aa3.39□□□□□ -1.87
MSD1YPL104W APE4P38821 490 aa3.39□□□□□ -1.87
MSD1YPL104W YHR177WP38867 453 aa3.39□□□□□ -1.87
MSD1YPL104W FAU1P40099 211 aa3.39□□□□□ -1.87
MSD1YPL104W VRG4P40107 337 aa3.39□□□□□ -1.87
MSD1YPL104W LYS12P40495 371 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W YFL066CP43538 392 aa3.39□□□□□ -1.87
MSD1YPL104W EXG2P52911 562 aa3.39□□□□□ -1.87
MSD1YPL104W YGR012WP53206 393 aa3.39□□□□□ -1.87
MSD1YPL104W YAP1802P53309 568 aa3.39□□□□□ -1.87
MSD1YPL104W COG5P53951 403 aa3.39□□□□□ -1.87
MSD1YPL104W MSC1Q03104 513 aa3.39□□□□□ -1.87
MSD1YPL104W RSN1Q03516 953 aa3.39□□□□□ -1.87
MSD1YPL104W STP4Q07351 490 aa3.39□□□□□ -1.87
MSD1YPL104W RPN8Q08723 338 aaKnown RBP3.39□□□□□ -1.87
MSD1YPL104W YPR022CQ12139 1133 aa3.39□□□□□ -1.87
MSD1YPL104W MED11Q99278 115 aa3.39□□□□□ -1.87
MSD1YPL104W VCX1Q99385 411 aa3.39□□□□□ -1.87
MSD1YPL104W YMR084WA2P2R3 262 aa3.38□□□□□ -1.87
MSD1YPL104W PPH21P23594 369 aa3.38□□□□□ -1.87
MSD1YPL104W CMK1P27466 446 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W VMA6P32366 345 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W ERG1P32476 496 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W PRP21P32524 280 aaPredicted RBP3.38□□□□□ -1.87
MSD1YPL104W ZUO1P32527 433 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W LHP1P33399 275 aaKnown RBP3.38□□□□□ -1.87
MSD1YPL104W LOT5P34234 306 aa3.38□□□□□ -1.87
MSD1YPL104W DOA1P36037 715 aa3.38□□□□□ -1.87
MSD1YPL104W WSC4P38739 605 aa3.38□□□□□ -1.87
MSD1YPL104W AIM2P39721 246 aa3.38□□□□□ -1.87
MSD1YPL104W SPO73P40031 143 aa3.38□□□□□ -1.87
MSD1YPL104W COG3P40094 801 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms