RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W DOA1P36037 715 aa2.14□□□□□ -2.07
VPS16YPL045W FLO5P38894 1075 aa2.14□□□□□ -2.07
VPS16YPL045W PET100P38958 111 aa2.14□□□□□ -2.07
VPS16YPL045W YMR134WP40207 237 aa2.14□□□□□ -2.07
VPS16YPL045W YIL024CP40543 189 aa2.14□□□□□ -2.07
VPS16YPL045W QRI1P43123 477 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W SNO3P43544 222 aa2.14□□□□□ -2.07
VPS16YPL045W GUF1P46943 645 aa2.14□□□□□ -2.07
VPS16YPL045W YNR048WP53740 393 aa2.14□□□□□ -2.07
VPS16YPL045W YNL181WP53878 407 aa2.14□□□□□ -2.07
VPS16YPL045W ODC1Q03028 310 aa2.14□□□□□ -2.07
VPS16YPL045W ATC1Q04005 294 aa2.14□□□□□ -2.07
VPS16YPL045W SMP3Q04174 516 aa2.14□□□□□ -2.07
VPS16YPL045W YMR034CQ05131 434 aaPredicted RBP2.14□□□□□ -2.07
VPS16YPL045W SGT1Q08446 395 aa2.14□□□□□ -2.07
VPS16YPL045W YDL009CQ12210 107 aa2.14□□□□□ -2.07
VPS16YPL045W RUD3Q12234 484 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W CFT1Q06632 1357 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W RRP5Q05022 1729 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W ARG4P04076 463 aaPredicted RBP2.13□□□□□ -2.07
VPS16YPL045W YAR066WP0CX18 203 aa2.13□□□□□ -2.07
VPS16YPL045W YHR214WP0CX19 203 aa2.13□□□□□ -2.07
VPS16YPL045W RPL42AP0CX27 106 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W RPL42BP0CX28 106 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W HNM1P19807 563 aa2.13□□□□□ -2.07
VPS16YPL045W NTG1P31378 399 aa2.13□□□□□ -2.07
VPS16YPL045W COX13P32799 129 aa2.13□□□□□ -2.07
VPS16YPL045W MRP4P32902 394 aa2.13□□□□□ -2.07
VPS16YPL045W RPC25P35718 212 aa2.13□□□□□ -2.07
VPS16YPL045W RSM22P36056 628 aa2.13□□□□□ -2.07
VPS16YPL045W FET3P38993 636 aa2.13□□□□□ -2.07
VPS16YPL045W SIM1P40472 476 aa2.13□□□□□ -2.07
VPS16YPL045W LOH1P47055 219 aa2.13□□□□□ -2.07
VPS16YPL045W LIA1P47120 325 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W RRN9P53437 365 aa2.13□□□□□ -2.07
VPS16YPL045W TDA7P53882 636 aaPredicted RBP2.13□□□□□ -2.07
VPS16YPL045W MRP51Q02950 344 aa2.13□□□□□ -2.07
VPS16YPL045W ECI1Q05871 280 aa2.13□□□□□ -2.07
VPS16YPL045W COQ11Q05892 277 aa2.13□□□□□ -2.07
VPS16YPL045W YOL075CQ08234 1294 aa2.13□□□□□ -2.07
VPS16YPL045W DNL4Q08387 944 aaPredicted RBP2.13□□□□□ -2.07
VPS16YPL045W APC5Q08683 685 aa2.13□□□□□ -2.07
VPS16YPL045W FMP16Q12497 93 aa2.13□□□□□ -2.07
VPS16YPL045W TY3B-IQ7LHG5 1498 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W TEF1P02994 458 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W TPK3P05986 398 aa2.13□□□□□ -2.07
VPS16YPL045W ATP1P07251 545 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W PET123P17558 318 aa2.13□□□□□ -2.07
VPS16YPL045W YAP1P19880 650 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W EFB1P32471 206 aaKnown RBP2.13□□□□□ -2.07
VPS16YPL045W VAM7P32912 316 aa2.13□□□□□ -2.07
VPS16YPL045W PPZ2P33329 710 aa2.13□□□□□ -2.07
VPS16YPL045W ECT1P33412 323 aa2.13□□□□□ -2.07
VPS16YPL045W SKT5P34226 696 aa2.13□□□□□ -2.07
VPS16YPL045W GWT1P47026 490 aa2.13□□□□□ -2.07
VPS16YPL045W BIO3P50277 480 aa2.13□□□□□ -2.07
VPS16YPL045W ARK1P53974 638 aa2.13□□□□□ -2.07
VPS16YPL045W RPL15BP54780 204 aaPredicted RBP2.13□□□□□ -2.07
VPS16YPL045W BET5Q03630 159 aa2.13□□□□□ -2.07
VPS16YPL045W NAT4Q04751 285 aa2.13□□□□□ -2.07
VPS16YPL045W ORM2Q06144 216 aa2.13□□□□□ -2.07
VPS16YPL045W VPS74Q06385 345 aa2.13□□□□□ -2.07
VPS16YPL045W ATX2Q12067 313 aa2.13□□□□□ -2.07
VPS16YPL045W PNS1Q12412 539 aa2.13□□□□□ -2.07
VPS16YPL045W GDH1P07262 454 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W RSR1P13856 272 aa2.12□□□□□ -2.07
VPS16YPL045W UTR1P21373 530 aa2.12□□□□□ -2.07
VPS16YPL045W DEG1P31115 442 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W HXT1P32465 570 aa2.12□□□□□ -2.07
VPS16YPL045W SPR1P32603 445 aa2.12□□□□□ -2.07
VPS16YPL045W LOS1P33418 1100 aaPredicted RBP2.12□□□□□ -2.07
VPS16YPL045W MYO3P36006 1272 aa2.12□□□□□ -2.07
VPS16YPL045W YNK1P36010 153 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W SCO2P38072 301 aa2.12□□□□□ -2.07
VPS16YPL045W DHH1P39517 506 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W SHO1P40073 367 aa2.12□□□□□ -2.07
VPS16YPL045W BTT1P40314 149 aaPredicted RBP2.12□□□□□ -2.07
VPS16YPL045W UTP25P40498 721 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W YGL082WP53155 381 aa2.12□□□□□ -2.07
VPS16YPL045W YNL260CP53846 198 aa2.12□□□□□ -2.07
VPS16YPL045W BUR2Q05949 395 aa2.12□□□□□ -2.07
VPS16YPL045W YLR173WQ06247 608 aa2.12□□□□□ -2.07
VPS16YPL045W YEH2Q07950 538 aa2.12□□□□□ -2.07
VPS16YPL045W TIM18Q08749 192 aa2.12□□□□□ -2.07
VPS16YPL045W RBD2Q12270 262 aa2.12□□□□□ -2.07
VPS16YPL045W CRC1Q12289 327 aa2.12□□□□□ -2.07
VPS16YPL045W NCA2Q12374 616 aa2.12□□□□□ -2.07
VPS16YPL045W YOP1Q12402 180 aa2.12□□□□□ -2.07
VPS16YPL045W APC2Q12440 853 aa2.12□□□□□ -2.07
VPS16YPL045W RRP12Q12754 1228 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W RGS2Q99188 309 aa2.12□□□□□ -2.07
VPS16YPL045W YER190C-BP0CX94 160 aa2.12□□□□□ -2.07
VPS16YPL045W YEL077W-AP0CX95 160 aa2.12□□□□□ -2.07
VPS16YPL045W YGR296C-BP0CX96 160 aa2.12□□□□□ -2.07
VPS16YPL045W YPL283W-BP0CX97 160 aa2.12□□□□□ -2.07
VPS16YPL045W YPR204C-AP0CX98 160 aa2.12□□□□□ -2.07
VPS16YPL045W YCR022CP25620 114 aa2.12□□□□□ -2.07
VPS16YPL045W TIP1P27654 210 aaPredicted RBP2.12□□□□□ -2.07
VPS16YPL045W ERG1P32476 496 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W MRPS5P33759 307 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms