RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA1	YNL021W	PPZ1	P26570	692 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	ECM25	P32525	599 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	ECT1	P33412	323 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	OTU1	P43558	301 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	TIM8	P57744	87 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	NRT1	Q08485	598 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	PUS9	Q12069	462 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	MED4	Q12343	284 aa		6.57	□□□□□ -1.36
HDA1	YNL021W	ALG7	P07286	448 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	RPL18A	P0CX49	186 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	RPL18B	P0CX50	186 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	DBR1	P24309	405 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	HXT1	P32465	570 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	STE24	P47154	453 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	PKP2	P53170	491 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	MRPL35	Q06678	367 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	ATG31	Q12421	196 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	MES1	P00958	751 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	RPL12A	P0CX53	165 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	RPL12B	P0CX54	165 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	SAR1	P20606	190 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	DBP7	P36120	742 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	YHB1	P39676	399 aa	Known RBP	6.56	□□□□□ -1.36
HDA1	YNL021W	TOS2	P50078	622 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	YNL146W	P53906	100 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	RSN1	Q03516	953 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	HSP31	Q04432	237 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	PDR8	Q06149	701 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	YLR040C	Q07988	224 aa		6.56	□□□□□ -1.36
HDA1	YNL021W	OPI3	P05375	206 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	ACH1	P32316	526 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	YKL023W	P36103	277 aa	Known RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	YIL060W	P40519	144 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	BNA3	P47039	444 aa	Known RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	YJR154W	P47181	346 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	IMA3	P0CW40	589 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	IMA4	P0CW41	589 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	MRP2	P10663	115 aa	Predicted RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	TYR1	P20049	452 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	FUN19	P28003	413 aa	Predicted RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	CWP1	P28319	239 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	MUD1	P32605	298 aa	Known RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	FET3	P38993	636 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	PCF11	P39081	626 aa	Predicted RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	ESBP6	P53918	673 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	NUP53	Q03790	475 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	SSQ1	Q05931	657 aa	Predicted RBP	6.55	□□□□□ -1.36
HDA1	YNL021W	CTS2	Q06350	511 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	BSC6	Q08280	497 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	IMA2	Q08295	589 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	RUP1	Q12242	671 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	AHC1	Q12433	566 aa		6.55	□□□□□ -1.36
HDA1	YNL021W	CDC21	P06785	304 aa		6.54	□□□□□ -1.36
HDA1	YNL021W	GDH1	P07262	454 aa	Known RBP	6.54	□□□□□ -1.36
HDA1	YNL021W	RPS2	P25443	254 aa	Known RBP	6.54	□□□□□ -1.36
HDA1	YNL021W	EXO1	P39875	702 aa		6.54	□□□□□ -1.36
HDA1	YNL021W	YAR1	P46683	200 aa		6.54	□□□□□ -1.36
HDA1	YNL021W	YNL260C	P53846	198 aa		6.54	□□□□□ -1.36
HDA1	YNL021W	COX20	Q04935	205 aa		6.54	□□□□□ -1.36
HDA1	YNL021W	ARG4	P04076	463 aa	Predicted RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	PMA2	P19657	947 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	CUE2	P36075	443 aa	Known RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	CCT4	P39078	528 aa	Known RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	LCP5	P40079	357 aa	Predicted RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	HXT9	P40885	567 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	TRS85	P46944	698 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	RRN11	Q04712	507 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	YMR321C	Q04898	105 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	SYO1	Q07395	620 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	IES4	Q08561	116 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	RKM5	Q12367	367 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	RVS161	P25343	265 aa	Known RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	CYS4	P32582	507 aa	Known RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	YKL097C	P34245	136 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	RTC2	P38279	296 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	BNA6	P43619	295 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	YJL118W	P47022	219 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	AVT1	P47082	602 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	IMD3	P50095	523 aa	Known RBP	6.53	□□□□□ -1.36
HDA1	YNL021W	GIP3	Q03016	1276 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	YPR053C	Q6Q5F3	151 aa		6.53	□□□□□ -1.36
HDA1	YNL021W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected
HDA1	YNL021W	COX2	P00410	251 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	RPO26	P20435	155 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	MSK1	P32048	576 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	ZUO1	P32527	433 aa	Known RBP	6.52	□□□□□ -1.37
HDA1	YNL021W	CGR1	P53188	120 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	CPR8	P53728	308 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	RNT1	Q02555	471 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	MMT1	Q03218	510 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	URH1	Q04179	340 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	GPN3	Q06543	272 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	MED7	Q08278	222 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	YCR006C	P25350	157 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	PRM9	P39551	298 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	LOH1	P47055	219 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	HSH155	P49955	971 aa	Known RBP	6.52	□□□□□ -1.37
HDA1	YNL021W	TAF12	Q03761	539 aa		6.52	□□□□□ -1.37
HDA1	YNL021W	YMR114C	Q04471	368 aa	Known RBP	6.52	□□□□□ -1.37
HDA1	YNL021W	DNL4	Q08387	944 aa	Predicted RBP	6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms