RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C VPS20Q04272 221 aa0.8□□□□□ -2.28
RKR1YMR247C RBA50Q04418 439 aa0.8□□□□□ -2.28
RKR1YMR247C FMP45Q07651 309 aa0.8□□□□□ -2.28
RKR1YMR247C ALE1Q08548 619 aa0.8□□□□□ -2.28
RKR1YMR247C YOR283WQ12040 230 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C ISA2Q12425 185 aa0.8□□□□□ -2.28
RKR1YMR247C TFB5Q3E7C1 72 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C PSK1P31374 1356 aa0.8□□□□□ -2.28
RKR1YMR247C SSK22P25390 1331 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C NUP192P47054 1683 aa0.8□□□□□ -2.28
RKR1YMR247C GAL80P04387 435 aa0.8□□□□□ -2.28
RKR1YMR247C RAD52P06778 471 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C ZRC1P20107 442 aa0.8□□□□□ -2.28
RKR1YMR247C CPR4P25334 318 aa0.8□□□□□ -2.28
RKR1YMR247C PHO91P27514 894 aa0.8□□□□□ -2.28
RKR1YMR247C MYO3P36006 1272 aa0.8□□□□□ -2.28
RKR1YMR247C MRP21P38175 177 aa0.8□□□□□ -2.28
RKR1YMR247C INM1P38710 295 aa0.8□□□□□ -2.28
RKR1YMR247C GPI16P38875 610 aa0.8□□□□□ -2.28
RKR1YMR247C UTP18P40362 594 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C SAS2P40963 338 aa0.8□□□□□ -2.28
RKR1YMR247C RPS10BP46784 105 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C RPS7BP48164 190 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C HSH155P49955 971 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C PKP2P53170 491 aa0.8□□□□□ -2.28
RKR1YMR247C RRP46P53256 223 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C YGR111WP53265 400 aa0.8□□□□□ -2.28
RKR1YMR247C TLG1Q03322 224 aa0.8□□□□□ -2.28
RKR1YMR247C ACL4Q03771 387 aa0.8□□□□□ -2.28
RKR1YMR247C IPK1Q06667 281 aa0.8□□□□□ -2.28
RKR1YMR247C TSR1Q07381 788 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C YPL245WQ12179 454 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C YDR061WQ12298 539 aa0.8□□□□□ -2.28
RKR1YMR247C PRM4Q12498 284 aa0.8□□□□□ -2.28
RKR1YMR247C STH1P32597 1359 aa0.8□□□□□ -2.28
RKR1YMR247C RAD3P06839 778 aa0.8□□□□□ -2.28
RKR1YMR247C RPL12AP0CX53 165 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C RPL12BP0CX54 165 aa0.8□□□□□ -2.28
RKR1YMR247C KAR3P17119 729 aa0.8□□□□□ -2.28
RKR1YMR247C PHO84P25297 587 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C SLM5P25345 492 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C CDC50P25656 391 aa0.8□□□□□ -2.28
RKR1YMR247C RPL16AP26784 199 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C CYM1P32898 989 aa0.8□□□□□ -2.28
RKR1YMR247C CAB3P36076 571 aa0.8□□□□□ -2.28
RKR1YMR247C SOL2P37262 315 aa0.8□□□□□ -2.28
RKR1YMR247C YCR041WP37265 110 aa0.8□□□□□ -2.28
RKR1YMR247C YHR122WP38829 231 aa0.8□□□□□ -2.28
RKR1YMR247C LCP5P40079 357 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C VID27P40157 782 aa0.8□□□□□ -2.28
RKR1YMR247C RRT5P43607 289 aa0.8□□□□□ -2.28
RKR1YMR247C PRM1P53835 661 aa0.8□□□□□ -2.28
RKR1YMR247C URC2Q04411 772 aa0.8□□□□□ -2.28
RKR1YMR247C RIF2Q06208 395 aa0.8□□□□□ -2.28
RKR1YMR247C MCH1Q07376 486 aa0.8□□□□□ -2.28
RKR1YMR247C NOP6Q07623 225 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C NCA2Q12374 616 aa0.8□□□□□ -2.28
RKR1YMR247C YER078W-AQ3E7A2 54 aa0.8□□□□□ -2.28
RKR1YMR247C YMR230W-AQ3E7B5 62 aa0.8□□□□□ -2.28
RKR1YMR247C UBA3Q99344 299 aa0.8□□□□□ -2.28
RKR1YMR247C GSC2P40989 1895 aa0.8□□□□□ -2.28
RKR1YMR247C GEA1P47102 1408 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C POM152P39685 1337 aa0.8□□□□□ -2.28
RKR1YMR247C DNF2Q12675 1612 aa0.79□□□□□ -2.28
RKR1YMR247C YPR096CO13587 100 aa0.79□□□□□ -2.28
RKR1YMR247C RNA1P11745 407 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C SAR1P20606 190 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C URA7P28274 579 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C STN1P38960 494 aa0.79□□□□□ -2.28
RKR1YMR247C POP2P39008 433 aa0.79□□□□□ -2.28
RKR1YMR247C YNL208WP40159 199 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C MAF1P41910 395 aa0.79□□□□□ -2.28
RKR1YMR247C STE24P47154 453 aa0.79□□□□□ -2.28
RKR1YMR247C NAS6P50086 228 aa0.79□□□□□ -2.28
RKR1YMR247C YIP5P53108 310 aa0.79□□□□□ -2.28
RKR1YMR247C MTM1P53320 366 aa0.79□□□□□ -2.28
RKR1YMR247C IPI3P53877 555 aa0.79□□□□□ -2.28
RKR1YMR247C PIR3Q03180 325 aa0.79□□□□□ -2.28
RKR1YMR247C SPH1Q06160 661 aa0.79□□□□□ -2.28
RKR1YMR247C YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.79□□□□□ -2.28not detected
RKR1YMR247C DCI1Q08558 271 aa0.79□□□□□ -2.28
RKR1YMR247C CLP1Q08685 445 aaPredicted RBP0.79□□□□□ -2.28
RKR1YMR247C RPS10AQ08745 105 aaPredicted RBP0.79□□□□□ -2.28
RKR1YMR247C YOR387CQ08910 206 aa0.79□□□□□ -2.28
RKR1YMR247C SLF1Q12034 447 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C YLR278CQ05854 1341 aa0.79□□□□□ -2.28
RKR1YMR247C HEM4P06174 275 aa0.79□□□□□ -2.28
RKR1YMR247C PDE2P06776 526 aa0.79□□□□□ -2.28
RKR1YMR247C RNR2P09938 399 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C RHB1P25378 209 aa0.79□□□□□ -2.28
RKR1YMR247C BEM1P29366 551 aa0.79□□□□□ -2.28
RKR1YMR247C TPS2P31688 896 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C ISC1P40015 477 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C LSM5P40089 93 aaKnown RBP0.79□□□□□ -2.28
RKR1YMR247C ATM1P40416 690 aa0.79□□□□□ -2.28
RKR1YMR247C TRS85P46944 698 aa0.79□□□□□ -2.28
RKR1YMR247C COX16P47081 118 aa0.79□□□□□ -2.28
RKR1YMR247C HMS2P47175 358 aa0.79□□□□□ -2.28
RKR1YMR247C DAD3P69850 94 aa0.79□□□□□ -2.28
RKR1YMR247C ADD37Q03233 198 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms