RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W SNF4P12904 322 aa3.62□□□□□ -1.83
USA1YML029W KSS1P14681 368 aa3.62□□□□□ -1.83
USA1YML029W HIS7P33734 552 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W NUF2P33895 451 aa3.62□□□□□ -1.83
USA1YML029W SLM4P38247 162 aa3.62□□□□□ -1.83
USA1YML029W EXO84P38261 753 aa3.62□□□□□ -1.83
USA1YML029W SIC1P38634 284 aa3.62□□□□□ -1.83
USA1YML029W SNL1P40548 159 aa3.62□□□□□ -1.83
USA1YML029W ARF3P40994 183 aaRIP-Chip data3.62□□□□□ -1.83not detected
USA1YML029W RPL10P41805 221 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W VNX1P42839 908 aa3.62□□□□□ -1.83
USA1YML029W ALK1P43633 760 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W IDS2P46958 469 aa3.62□□□□□ -1.83
USA1YML029W MRK1P50873 501 aa3.62□□□□□ -1.83
USA1YML029W REC102Q02721 264 aa3.62□□□□□ -1.83
USA1YML029W EMG1Q06287 252 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W ARO10Q06408 635 aa3.62□□□□□ -1.83
USA1YML029W YLR036CQ07986 203 aa3.62□□□□□ -1.83
USA1YML029W YOR342CQ12182 319 aa3.62□□□□□ -1.83
USA1YML029W BRR2P32639 2163 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W SUI3P09064 285 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W ACP1P32463 125 aa3.61□□□□□ -1.83
USA1YML029W LYP1P32487 611 aa3.61□□□□□ -1.83
USA1YML029W HBS1P32769 611 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W MKS1P34072 584 aa3.61□□□□□ -1.83
USA1YML029W ZTA1P38230 334 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W DLD3P39976 496 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W YEL020CP39994 560 aa3.61□□□□□ -1.83
USA1YML029W GID8P40208 455 aa3.61□□□□□ -1.83
USA1YML029W LAS21P40367 830 aa3.61□□□□□ -1.83
USA1YML029W YIL152WP40455 235 aa3.61□□□□□ -1.83
USA1YML029W VMA10P48836 114 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W YPL107WQ02873 248 aa3.61□□□□□ -1.83
USA1YML029W YDR239CQ03780 787 aa3.61□□□□□ -1.83
USA1YML029W YPR174CQ06616 221 aaPredicted RBP3.61□□□□□ -1.83
USA1YML029W FMP40Q08968 688 aaPredicted RBP3.61□□□□□ -1.83
USA1YML029W AKR2Q12013 749 aa3.61□□□□□ -1.83
USA1YML029W YDL199CQ12407 687 aa3.61□□□□□ -1.83
USA1YML029W HBN1Q96VH4 193 aa3.61□□□□□ -1.83
USA1YML029W GAL1P04385 528 aa3.61□□□□□ -1.83
USA1YML029W ZWF1P11412 505 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W ATR1P13090 542 aa3.61□□□□□ -1.83
USA1YML029W CBS1P14066 229 aa3.61□□□□□ -1.83
USA1YML029W FAR1P21268 830 aa3.61□□□□□ -1.83
USA1YML029W CHA1P25379 360 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W NTG1P31378 399 aa3.61□□□□□ -1.83
USA1YML029W HIR2P32480 875 aa3.61□□□□□ -1.83
USA1YML029W MDJ1P35191 511 aa3.61□□□□□ -1.83
USA1YML029W RPS27AP35997 82 aaKnown RBP3.61□□□□□ -1.83
USA1YML029W YKR073CP36153 106 aa3.61□□□□□ -1.83
USA1YML029W YBR139WP38109 508 aa3.61□□□□□ -1.83
USA1YML029W RPS27BP38711 82 aa3.61□□□□□ -1.83
USA1YML029W PEX18P38855 283 aa3.61□□□□□ -1.83
USA1YML029W MBP1P39678 833 aa3.61□□□□□ -1.83
USA1YML029W SWD1P39706 426 aa3.61□□□□□ -1.83
USA1YML029W AIM2P39721 246 aa3.61□□□□□ -1.83
USA1YML029W SER3P40054 469 aa3.61□□□□□ -1.83
USA1YML029W TWF1P53250 332 aa3.61□□□□□ -1.83
USA1YML029W CSL4P53859 292 aaPredicted RBP3.61□□□□□ -1.83
USA1YML029W YLR460CP54007 376 aa3.61□□□□□ -1.83
USA1YML029W RSC9Q03124 581 aa3.61□□□□□ -1.83
USA1YML029W RIM13Q03792 727 aa3.61□□□□□ -1.83
USA1YML029W DFG5Q05031 458 aa3.61□□□□□ -1.83
USA1YML029W MDM30Q05930 598 aa3.61□□□□□ -1.83
USA1YML029W MCA1Q08601 432 aa3.61□□□□□ -1.83
USA1YML029W VIK1Q12045 647 aa3.61□□□□□ -1.83
USA1YML029W BSC1Q12140 328 aa3.61□□□□□ -1.83
USA1YML029W YBL029C-AQ3E756 94 aa3.61□□□□□ -1.83
USA1YML029W AI1P03875 834 aa3.6□□□□□ -1.83
USA1YML029W CAR2P07991 424 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W MER1P16523 270 aa3.6□□□□□ -1.83
USA1YML029W SPC34P36131 295 aa3.6□□□□□ -1.83
USA1YML029W HRB1P38922 454 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
USA1YML029W GVP36P40531 326 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W CUP9P41817 306 aa3.6□□□□□ -1.83
USA1YML029W MDE1P47095 244 aa3.6□□□□□ -1.83
USA1YML029W HOL1P53389 586 aa3.6□□□□□ -1.83
USA1YML029W RAD30Q04049 632 aa3.6□□□□□ -1.83
USA1YML029W MRX4Q12467 430 aa3.6□□□□□ -1.83
USA1YML029W HTS1P07263 546 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W FBA1P14540 359 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W RRP7P25368 297 aaPredicted RBP3.6□□□□□ -1.83
USA1YML029W TIF11P38912 153 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W THO1P40040 218 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W RIO2P40160 425 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W MPM1P40364 252 aa3.6□□□□□ -1.83
USA1YML029W TRM9P49957 279 aa3.6□□□□□ -1.83
USA1YML029W ARI1P53111 347 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W RHO5P53879 331 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W SWP1Q02795 286 aa3.6□□□□□ -1.83
USA1YML029W TRS23Q03784 219 aa3.6□□□□□ -1.83
USA1YML029W SEC13Q04491 297 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W YMR226CQ05016 267 aaKnown RBP3.6□□□□□ -1.83
USA1YML029W UTP21Q06078 939 aaPredicted RBP3.6□□□□□ -1.83
USA1YML029W ACC1Q00955 2233 aaKnown RBP3.59□□□□□ -1.83
USA1YML029W CYR1P08678 2026 aaKnown RBP3.59□□□□□ -1.83
USA1YML029W TIM9O74700 87 aa3.59□□□□□ -1.83
USA1YML029W YOL163WP0CF20 169 aa3.59□□□□□ -1.83
USA1YML029W GRR1P24814 1151 aa3.59□□□□□ -1.83
USA1YML029W STP22P25604 385 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms