RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C BSC6Q08280 497 aa3.83□□□□□ -1.8
BLS1YLR408C PCL1P24867 279 aa3.82□□□□□ -1.8
BLS1YLR408C CDC50P25656 391 aa3.82□□□□□ -1.8
BLS1YLR408C SPO23P33757 523 aa3.82□□□□□ -1.8
BLS1YLR408C UTH1P36135 365 aa3.82□□□□□ -1.8
BLS1YLR408C YNL208WP40159 199 aaKnown RBP3.82□□□□□ -1.8
BLS1YLR408C KEG1P43614 200 aa3.82□□□□□ -1.8
BLS1YLR408C RET3P53600 189 aa3.82□□□□□ -1.8
BLS1YLR408C YPL107WQ02873 248 aa3.82□□□□□ -1.8
BLS1YLR408C YPR078CQ06813 372 aa3.82□□□□□ -1.8
BLS1YLR408C FRE6Q12473 712 aa3.82□□□□□ -1.8
BLS1YLR408C PCL9Q12477 304 aa3.82□□□□□ -1.8
BLS1YLR408C TFB5Q3E7C1 72 aaPredicted RBP3.82□□□□□ -1.8
BLS1YLR408C NAT1P12945 854 aaKnown RBP3.81□□□□□ -1.8
BLS1YLR408C NOP1P15646 327 aaKnown RBP3.81□□□□□ -1.8
BLS1YLR408C MRPL8P22353 238 aa3.81□□□□□ -1.8
BLS1YLR408C MSP1P28737 362 aa3.81□□□□□ -1.8
BLS1YLR408C PSO2P30620 661 aa3.81□□□□□ -1.8
BLS1YLR408C DPH2P32461 534 aa3.81□□□□□ -1.8
BLS1YLR408C YBL028CP38202 106 aa3.81□□□□□ -1.8
BLS1YLR408C APE4P38821 490 aa3.81□□□□□ -1.8
BLS1YLR408C SEC27P41811 889 aaKnown RBP3.81□□□□□ -1.8
BLS1YLR408C AIP1P46680 615 aaKnown RBP3.81□□□□□ -1.8
BLS1YLR408C SFG1Q12507 346 aa3.81□□□□□ -1.8
BLS1YLR408C MAS2P11914 482 aa3.8□□□□□ -1.8
BLS1YLR408C UBA1P22515 1024 aaKnown RBP3.8□□□□□ -1.8
BLS1YLR408C ADH5P38113 351 aaKnown RBP3.8□□□□□ -1.8
BLS1YLR408C ECM8P38246 354 aa3.8□□□□□ -1.8
BLS1YLR408C LSM12P38828 187 aaKnown RBP3.8□□□□□ -1.8
BLS1YLR408C ALD5P40047 520 aaKnown RBP3.8□□□□□ -1.8
BLS1YLR408C LCP5P40079 357 aaPredicted RBP3.8□□□□□ -1.8
BLS1YLR408C YNR068CP53754 272 aa3.8□□□□□ -1.8
BLS1YLR408C UTP6Q02354 440 aaKnown RBP3.8□□□□□ -1.8
BLS1YLR408C GAT3Q07928 141 aa3.8□□□□□ -1.8
BLS1YLR408C MCT1Q12283 360 aa3.8□□□□□ -1.8
BLS1YLR408C SCH9P11792 824 aaKnown RBP3.79□□□□□ -1.8
BLS1YLR408C EFB1P32471 206 aaKnown RBP3.79□□□□□ -1.8
BLS1YLR408C VAM7P32912 316 aa3.79□□□□□ -1.8
BLS1YLR408C BLI1P35727 113 aa3.79□□□□□ -1.8
BLS1YLR408C CIN2P46670 268 aa3.79□□□□□ -1.8
BLS1YLR408C YHC1Q05900 231 aaKnown RBP3.79□□□□□ -1.8
BLS1YLR408C PRB1P09232 635 aa3.78□□□□□ -1.8
BLS1YLR408C RPS18AP0CX55 146 aaKnown RBP3.78□□□□□ -1.8
BLS1YLR408C RPS18BP0CX56 146 aaPredicted RBP3.78□□□□□ -1.8
BLS1YLR408C CHA1P25379 360 aaKnown RBP3.78□□□□□ -1.8
BLS1YLR408C RDS1P25611 832 aa3.78□□□□□ -1.8
BLS1YLR408C DEP1P31385 405 aa3.78□□□□□ -1.8
BLS1YLR408C MSK1P32048 576 aa3.78□□□□□ -1.8
BLS1YLR408C LYS12P40495 371 aaKnown RBP3.78□□□□□ -1.8
BLS1YLR408C REX2P54964 269 aaKnown RBP3.78□□□□□ -1.8
BLS1YLR408C LIP2Q06005 328 aa3.78□□□□□ -1.8
BLS1YLR408C PEX27Q08580 376 aa3.78□□□□□ -1.8
BLS1YLR408C YOR338WQ99326 363 aa3.78□□□□□ -1.8
BLS1YLR408C ZRC1P20107 442 aa3.77□□□□□ -1.81
BLS1YLR408C GIT1P25346 518 aa3.77□□□□□ -1.81
BLS1YLR408C SWI3P32591 825 aa3.77□□□□□ -1.81
BLS1YLR408C LAS1P36146 502 aaPredicted RBP3.77□□□□□ -1.81
BLS1YLR408C MRP21P38175 177 aa3.77□□□□□ -1.81
BLS1YLR408C TIM17P39515 158 aa3.77□□□□□ -1.81
BLS1YLR408C DNL4Q08387 944 aaPredicted RBP3.77□□□□□ -1.81
BLS1YLR408C COX4P04037 155 aa3.76□□□□□ -1.81
BLS1YLR408C GRR1P24814 1151 aa3.76□□□□□ -1.81
BLS1YLR408C PHO84P25297 587 aaKnown RBP3.76□□□□□ -1.81
BLS1YLR408C POT1P27796 417 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
BLS1YLR408C CTK3P46963 296 aaPredicted RBP3.76□□□□□ -1.81
BLS1YLR408C TRF5P48561 642 aaKnown RBP3.76□□□□□ -1.81
BLS1YLR408C DBP9Q06218 594 aaKnown RBP3.76□□□□□ -1.81
BLS1YLR408C STE7P06784 515 aa3.75□□□□□ -1.81
BLS1YLR408C RPS16AP0CX51 143 aaKnown RBP3.75□□□□□ -1.81
BLS1YLR408C RPS16BP0CX52 143 aaKnown RBP3.75□□□□□ -1.81
BLS1YLR408C THR4P16120 514 aaKnown RBP3.75□□□□□ -1.81
BLS1YLR408C DBR1P24309 405 aaKnown RBP3.75□□□□□ -1.81
BLS1YLR408C SSE1P32589 693 aaKnown RBP3.75□□□□□ -1.81
BLS1YLR408C RPA34P47006 233 aaPredicted RBP3.75□□□□□ -1.81
BLS1YLR408C PGU1P47180 361 aa3.75□□□□□ -1.81
BLS1YLR408C MPS2P53159 387 aa3.75□□□□□ -1.81
BLS1YLR408C MSC3Q05812 728 aa3.75□□□□□ -1.81
BLS1YLR408C SHS1Q07657 551 aa3.75□□□□□ -1.81
BLS1YLR408C NFI1Q12216 726 aa3.75□□□□□ -1.81
BLS1YLR408C SFM1Q12314 213 aa3.75□□□□□ -1.81
BLS1YLR408C GPI18P38211 433 aa3.74□□□□□ -1.81
BLS1YLR408C SEC9P40357 651 aa3.74□□□□□ -1.81
BLS1YLR408C EFM3P47163 339 aa3.74□□□□□ -1.81
BLS1YLR408C VHT1P53241 593 aa3.74□□□□□ -1.81
BLS1YLR408C YNL143CP53908 130 aa3.74□□□□□ -1.81
BLS1YLR408C VAC7P53950 1165 aa3.74□□□□□ -1.81
BLS1YLR408C YLH47Q06493 454 aa3.74□□□□□ -1.81
BLS1YLR408C AIM45Q12480 344 aaKnown RBP3.74□□□□□ -1.81
BLS1YLR408C NBL1Q3E7Y6 73 aa3.74□□□□□ -1.81
BLS1YLR408C FSH3Q99369 266 aa3.74□□□□□ -1.81
BLS1YLR408C HEM4P06174 275 aa3.73□□□□□ -1.81
BLS1YLR408C FAR1P21268 830 aa3.73□□□□□ -1.81
BLS1YLR408C VPH1P32563 840 aaKnown RBP3.73□□□□□ -1.81
BLS1YLR408C IES6P32617 166 aa3.73□□□□□ -1.81
BLS1YLR408C SIF2P38262 535 aa3.73□□□□□ -1.81
BLS1YLR408C PFS1P38872 237 aa3.73□□□□□ -1.81
BLS1YLR408C IGD1P43598 195 aa3.73□□□□□ -1.81
BLS1YLR408C SEH1P53011 349 aaKnown RBP3.73□□□□□ -1.81
BLS1YLR408C MRPS16Q02608 121 aa3.73□□□□□ -1.81
BLS1YLR408C AIM33Q04516 312 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms