RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C SKN1P33336 771 aa1.88□□□□□ -2.11
RTT101YJL047C MIA40P36046 403 aa1.88□□□□□ -2.11
RTT101YJL047C DTR1P38125 572 aa1.88□□□□□ -2.11
RTT101YJL047C URA8P38627 578 aaPredicted RBP1.88□□□□□ -2.11
RTT101YJL047C ATG7P38862 630 aa1.88□□□□□ -2.11
RTT101YJL047C AIM24P47127 394 aa1.88□□□□□ -2.11
RTT101YJL047C SSN8P47821 323 aa1.88□□□□□ -2.11
RTT101YJL047C YPT11P48559 417 aa1.88□□□□□ -2.11
RTT101YJL047C NSG2P53898 299 aa1.88□□□□□ -2.11
RTT101YJL047C SKI8Q02793 397 aaPredicted RBP1.88□□□□□ -2.11
RTT101YJL047C SPO77Q06134 477 aa1.88□□□□□ -2.11
RTT101YJL047C THI3Q07471 609 aa1.88□□□□□ -2.11
RTT101YJL047C YOL075CQ08234 1294 aa1.88□□□□□ -2.11
RTT101YJL047C YPQ1Q12010 308 aa1.88□□□□□ -2.11
RTT101YJL047C SLF1Q12034 447 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C SIA1Q12212 622 aa1.88□□□□□ -2.11
RTT101YJL047C RRI1Q12468 440 aa1.88□□□□□ -2.11
RTT101YJL047C RGS2Q99188 309 aa1.88□□□□□ -2.11
RTT101YJL047C SEY1Q99287 776 aa1.88□□□□□ -2.11
RTT101YJL047C MRP2P10663 115 aaPredicted RBP1.88□□□□□ -2.11
RTT101YJL047C MAS2P11914 482 aa1.88□□□□□ -2.11
RTT101YJL047C WHI2P12611 486 aa1.88□□□□□ -2.11
RTT101YJL047C FAR1P21268 830 aa1.88□□□□□ -2.11
RTT101YJL047C VPS1P21576 704 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C KIN3P22209 435 aa1.88□□□□□ -2.11
RTT101YJL047C RPL24BP24000 155 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C CTR86P25355 563 aa1.88□□□□□ -2.11
RTT101YJL047C ERG9P29704 444 aa1.88□□□□□ -2.11
RTT101YJL047C RAD24P32641 659 aa1.88□□□□□ -2.11
RTT101YJL047C LIP5P32875 414 aa1.88□□□□□ -2.11
RTT101YJL047C LST4P34239 828 aa1.88□□□□□ -2.11
RTT101YJL047C YAL037WP39728 267 aa1.88□□□□□ -2.11
RTT101YJL047C ZRG17P53735 605 aa1.88□□□□□ -2.11
RTT101YJL047C SNO2P53823 222 aa1.88□□□□□ -2.11
RTT101YJL047C GPI15P53961 229 aa1.88□□□□□ -2.11
RTT101YJL047C ASI1P54074 624 aa1.88□□□□□ -2.11
RTT101YJL047C CDC14Q00684 551 aa1.88□□□□□ -2.11
RTT101YJL047C RRP17Q04031 235 aaPredicted RBP1.88□□□□□ -2.11
RTT101YJL047C CAC2Q04199 468 aa1.88□□□□□ -2.11
RTT101YJL047C ADH6Q04894 360 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C LDS2Q08218 356 aa1.88□□□□□ -2.11
RTT101YJL047C ENB1Q08299 606 aa1.88□□□□□ -2.11
RTT101YJL047C SNF8Q12483 233 aa1.88□□□□□ -2.11
RTT101YJL047C YDR157WA0A023PZE8 133 aa1.87□□□□□ -2.11
RTT101YJL047C REV1P12689 985 aa1.87□□□□□ -2.11
RTT101YJL047C POX1P13711 748 aa1.87□□□□□ -2.11
RTT101YJL047C YAK1P14680 807 aa1.87□□□□□ -2.11
RTT101YJL047C STE18P18852 110 aa1.87□□□□□ -2.11
RTT101YJL047C DAL82P21705 255 aa1.87□□□□□ -2.11
RTT101YJL047C SAT4P25333 603 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C PUT3P25502 979 aaPredicted RBP1.87□□□□□ -2.11
RTT101YJL047C ATP7P30902 174 aa1.87□□□□□ -2.11
RTT101YJL047C VMA6P32366 345 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C COQ2P32378 372 aa1.87□□□□□ -2.11
RTT101YJL047C APE2P32454 952 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C IES6P32617 166 aa1.87□□□□□ -2.11
RTT101YJL047C CBR1P38626 284 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C ISC1P40015 477 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C AGP3P43548 558 aa1.87□□□□□ -2.11
RTT101YJL047C YJR154WP47181 346 aa1.87□□□□□ -2.11
RTT101YJL047C NBP1P52919 319 aaPredicted RBP1.87□□□□□ -2.11
RTT101YJL047C SEH1P53011 349 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C OKP1P53298 406 aa1.87□□□□□ -2.11
RTT101YJL047C AAT1Q01802 451 aa1.87□□□□□ -2.11
RTT101YJL047C YPL014WQ02606 381 aa1.87□□□□□ -2.11
RTT101YJL047C RVB1Q03940 463 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C TMN2Q04562 672 aa1.87□□□□□ -2.11
RTT101YJL047C IVY1Q04934 453 aa1.87□□□□□ -2.11
RTT101YJL047C FAR8Q05040 523 aa1.87□□□□□ -2.11
RTT101YJL047C TMA10Q06177 86 aa1.87□□□□□ -2.11
RTT101YJL047C PBP4Q07362 185 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C REX4Q08237 289 aa1.87□□□□□ -2.11
RTT101YJL047C YOR387CQ08910 206 aa1.87□□□□□ -2.11
RTT101YJL047C SAM4Q08985 325 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C ATG34Q12292 412 aa1.87□□□□□ -2.11
RTT101YJL047C YOR338WQ99326 363 aa1.87□□□□□ -2.11
RTT101YJL047C CYC7P00045 113 aa1.87□□□□□ -2.11
RTT101YJL047C RPL27AP0C2H6 136 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C RPL27BP0C2H7 136 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C HEM15P16622 393 aa1.87□□□□□ -2.11
RTT101YJL047C MRPL9P31334 269 aa1.87□□□□□ -2.11
RTT101YJL047C VAM7P32912 316 aa1.87□□□□□ -2.11
RTT101YJL047C ROT2P38138 954 aa1.87□□□□□ -2.11
RTT101YJL047C CCT4P39078 528 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C SEC72P39742 193 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C YER121WP40076 114 aa1.87□□□□□ -2.11
RTT101YJL047C MMF1P40185 145 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C SIM1P40472 476 aa1.87□□□□□ -2.11
RTT101YJL047C TDA10P42938 290 aa1.87□□□□□ -2.11
RTT101YJL047C HOC1P47124 396 aa1.87□□□□□ -2.11
RTT101YJL047C IBA57P47158 497 aa1.87□□□□□ -2.11
RTT101YJL047C MIG2P53035 382 aa1.87□□□□□ -2.11
RTT101YJL047C SLX9P53251 210 aaPredicted RBP1.87□□□□□ -2.11
RTT101YJL047C PXR1P53335 271 aaPredicted RBP1.87□□□□□ -2.11
RTT101YJL047C RRN9P53437 365 aa1.87□□□□□ -2.11
RTT101YJL047C MRPL50P53724 139 aa1.87□□□□□ -2.11
RTT101YJL047C YMR226CQ05016 267 aaKnown RBP1.87□□□□□ -2.11
RTT101YJL047C CDA2Q06703 312 aa1.87□□□□□ -2.11
RTT101YJL047C DAP1Q12091 152 aa1.87□□□□□ -2.11
RTT101YJL047C YLL056CQ12177 298 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms