RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YPL245WQ12179 454 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C HAL9Q12180 1030 aa3.35□□□□□ -1.87
SSM4YIL030C SFM1Q12314 213 aa3.35□□□□□ -1.87
SSM4YIL030C THP2O13539 261 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C RAM1P22007 431 aa3.35□□□□□ -1.87
SSM4YIL030C RFA2P26754 273 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C PET309P32522 965 aaPredicted RBP3.35□□□□□ -1.87
SSM4YIL030C PMT1P33775 817 aa3.35□□□□□ -1.87
SSM4YIL030C YKL151CP36059 337 aa3.35□□□□□ -1.87
SSM4YIL030C IML3P38265 245 aa3.35□□□□□ -1.87
SSM4YIL030C IMD2P38697 523 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C TVP23P38962 199 aa3.35□□□□□ -1.87
SSM4YIL030C SPC25P40014 221 aa3.35□□□□□ -1.87
SSM4YIL030C TOK1P40310 691 aa3.35□□□□□ -1.87
SSM4YIL030C XBP1P40489 647 aa3.35□□□□□ -1.87
SSM4YIL030C CDC1P40986 491 aa3.35□□□□□ -1.87
SSM4YIL030C PFA3P42836 336 aa3.35□□□□□ -1.87
SSM4YIL030C ATG36P46983 293 aa3.35□□□□□ -1.87
SSM4YIL030C SPC98P53540 846 aa3.35□□□□□ -1.87
SSM4YIL030C AAT1Q01802 451 aa3.35□□□□□ -1.87
SSM4YIL030C KAP120Q02932 1032 aa3.35□□□□□ -1.87
SSM4YIL030C ARX1Q03862 593 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C SPO77Q06134 477 aa3.35□□□□□ -1.87
SSM4YIL030C GRE1Q08969 168 aa3.35□□□□□ -1.87
SSM4YIL030C LSO2Q3E772 92 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C YOL163WP0CF20 169 aa3.35□□□□□ -1.87
SSM4YIL030C ERD2P18414 219 aa3.35□□□□□ -1.87
SSM4YIL030C GAP1P19145 602 aaPredicted RBP3.35□□□□□ -1.87
SSM4YIL030C HOP1P20050 605 aa3.35□□□□□ -1.87
SSM4YIL030C IDP1P21954 428 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C POF1P25576 258 aa3.35□□□□□ -1.87
SSM4YIL030C COQ8P27697 501 aa3.35□□□□□ -1.87
SSM4YIL030C MET22P32179 357 aa3.35□□□□□ -1.87
SSM4YIL030C ATP11P32453 318 aa3.35□□□□□ -1.87
SSM4YIL030C GPI16P38875 610 aa3.35□□□□□ -1.87
SSM4YIL030C YIL108WP40483 696 aaKnown RBP3.35□□□□□ -1.87
SSM4YIL030C ZIM17P42844 174 aa3.35□□□□□ -1.87
SSM4YIL030C GSM1P42950 618 aa3.35□□□□□ -1.87
SSM4YIL030C MAL11P53048 616 aa3.35□□□□□ -1.87
SSM4YIL030C NQM1P53228 333 aaPredicted RBP3.35□□□□□ -1.87
SSM4YIL030C CAF40P53829 373 aa3.35□□□□□ -1.87
SSM4YIL030C CSN9Q03981 162 aa3.35□□□□□ -1.87
SSM4YIL030C SYM1Q06563 197 aa3.35□□□□□ -1.87
SSM4YIL030C AAD4Q07747 329 aa3.35□□□□□ -1.87
SSM4YIL030C TEN1Q07921 160 aa3.35□□□□□ -1.87
SSM4YIL030C XYL2Q07993 356 aa3.35□□□□□ -1.87
SSM4YIL030C BDS1Q08347 646 aa3.35□□□□□ -1.87
SSM4YIL030C YLR125WQ12138 136 aa3.35□□□□□ -1.87
SSM4YIL030C TY1A-DR3Q12441 440 aa3.35□□□□□ -1.87
SSM4YIL030C MRPL33P20084 86 aa3.34□□□□□ -1.87
SSM4YIL030C ARO7P32178 256 aa3.34□□□□□ -1.87
SSM4YIL030C NRP1P32770 719 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SSM4YIL030C MAC1P35192 417 aa3.34□□□□□ -1.87
SSM4YIL030C DTR1P38125 572 aa3.34□□□□□ -1.87
SSM4YIL030C DOT6P40059 670 aaKnown RBP3.34□□□□□ -1.87
SSM4YIL030C SKP2P42843 763 aa3.34□□□□□ -1.87
SSM4YIL030C SCY1P53009 804 aa3.34□□□□□ -1.87
SSM4YIL030C DOC1P53068 250 aa3.34□□□□□ -1.87
SSM4YIL030C GPG1P53130 126 aa3.34□□□□□ -1.87
SSM4YIL030C YPR172WQ06608 200 aa3.34□□□□□ -1.87
SSM4YIL030C LDB18Q07887 179 aa3.34□□□□□ -1.87
SSM4YIL030C YOR238WQ08634 303 aa3.34□□□□□ -1.87
SSM4YIL030C FRE5Q08908 694 aa3.34□□□□□ -1.87
SSM4YIL030C PGC1Q08959 321 aa3.34□□□□□ -1.87
SSM4YIL030C PER33Q12144 273 aa3.34□□□□□ -1.87
SSM4YIL030C ARE1P25628 610 aa3.34□□□□□ -1.87
SSM4YIL030C PRP39P39682 629 aaKnown RBP3.34□□□□□ -1.87
SSM4YIL030C VAC8P39968 578 aa3.34□□□□□ -1.87
SSM4YIL030C SOK1P40317 901 aa3.34□□□□□ -1.87
SSM4YIL030C RFC2P40348 353 aa3.34□□□□□ -1.87
SSM4YIL030C GTO1P48239 356 aa3.34□□□□□ -1.87
SSM4YIL030C TOM22P49334 152 aa3.34□□□□□ -1.87
SSM4YIL030C DIE2P50076 525 aa3.34□□□□□ -1.87
SSM4YIL030C PMT5P52867 743 aa3.34□□□□□ -1.87
SSM4YIL030C RHO3Q00245 231 aaKnown RBP3.34□□□□□ -1.87
SSM4YIL030C JIP4Q03361 876 aa3.34□□□□□ -1.87
SSM4YIL030C YHC1Q05900 231 aaKnown RBP3.34□□□□□ -1.87
SSM4YIL030C THI73Q07904 523 aa3.34□□□□□ -1.87
SSM4YIL030C YLR040CQ07988 224 aa3.34□□□□□ -1.87
SSM4YIL030C GRR1P24814 1151 aa3.34□□□□□ -1.88
SSM4YIL030C MGR1P25573 417 aa3.34□□□□□ -1.88
SSM4YIL030C NDI1P32340 513 aa3.34□□□□□ -1.88
SSM4YIL030C VPS17P32913 551 aa3.34□□□□□ -1.88
SSM4YIL030C MCM7P38132 845 aa3.34□□□□□ -1.88
SSM4YIL030C YHR177WP38867 453 aa3.34□□□□□ -1.88
SSM4YIL030C PAU15P40585 124 aa3.34□□□□□ -1.88
SSM4YIL030C LSB6P42951 607 aa3.34□□□□□ -1.88
SSM4YIL030C YJR149WP47177 404 aa3.34□□□□□ -1.88
SSM4YIL030C PRM1P53835 661 aa3.34□□□□□ -1.88
SSM4YIL030C TDA1Q03533 586 aa3.34□□□□□ -1.88
SSM4YIL030C RIF2Q06208 395 aa3.34□□□□□ -1.88
SSM4YIL030C ANT1Q06497 328 aa3.34□□□□□ -1.88
SSM4YIL030C ARG81P05085 880 aa3.33□□□□□ -1.88
SSM4YIL030C SAM35P14693 329 aa3.33□□□□□ -1.88
SSM4YIL030C FUS3P16892 353 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C GRX2P17695 143 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C PET127P32606 800 aa3.33□□□□□ -1.88
SSM4YIL030C YCR087C-AP37263 153 aa3.33□□□□□ -1.88
SSM4YIL030C BMT2P38278 337 aa3.33□□□□□ -1.88
SSM4YIL030C YGR201CP42936 225 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 154.1 ms