RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C RIX1P38883 763 aaPredicted RBP12.02□□□□□ -0.49
SHU1YHL006C YJL193WP39542 402 aa12.02□□□□□ -0.49
SHU1YHL006C REE1P40893 198 aa12.02□□□□□ -0.49
SHU1YHL006C RHO5P53879 331 aaKnown RBP12.02□□□□□ -0.49
SHU1YHL006C IGO1P53897 168 aa12.02□□□□□ -0.49
SHU1YHL006C RSC9Q03124 581 aa12.02□□□□□ -0.49
SHU1YHL006C SDC1Q03323 175 aa12.02□□□□□ -0.49
SHU1YHL006C STE12P13574 688 aa12.01□□□□□ -0.49
SHU1YHL006C SBA1P28707 216 aaKnown RBP12.01□□□□□ -0.49
SHU1YHL006C DEP1P31385 405 aa12.01□□□□□ -0.49
SHU1YHL006C SEC61P32915 480 aa12.01□□□□□ -0.49
SHU1YHL006C TOS2P50078 622 aa12.01□□□□□ -0.49
SHU1YHL006C COS6P53344 381 aa12.01□□□□□ -0.49
SHU1YHL006C YDR249CQ03787 373 aa12.01□□□□□ -0.49
SHU1YHL006C RIM13Q03792 727 aa12.01□□□□□ -0.49
SHU1YHL006C SWM1Q12379 170 aa12.01□□□□□ -0.49
SHU1YHL006C MOD5P07884 428 aa12□□□□□ -0.49
SHU1YHL006C MAK32P23060 363 aa12□□□□□ -0.49
SHU1YHL006C YKR073CP36153 106 aa12□□□□□ -0.49
SHU1YHL006C BIG1P38813 335 aa12□□□□□ -0.49
SHU1YHL006C CIN4P39110 191 aa12□□□□□ -0.49
SHU1YHL006C ECM10P39987 644 aa12□□□□□ -0.49
SHU1YHL006C YER010CP40011 234 aa12□□□□□ -0.49
SHU1YHL006C TOK1P40310 691 aa12□□□□□ -0.49
SHU1YHL006C XBP1P40489 647 aa12□□□□□ -0.49
SHU1YHL006C ECL1P48235 211 aa12□□□□□ -0.49
SHU1YHL006C RSN1Q03516 953 aa12□□□□□ -0.49
SHU1YHL006C PLB2Q03674 706 aa12□□□□□ -0.49
SHU1YHL006C URC2Q04411 772 aa12□□□□□ -0.49
SHU1YHL006C ATG38Q05789 226 aaKnown RBP12□□□□□ -0.49
SHU1YHL006C BUR2Q05949 395 aa12□□□□□ -0.49
SHU1YHL006C SPO77Q06134 477 aa12□□□□□ -0.49
SHU1YHL006C HDA2Q06629 674 aa12□□□□□ -0.49
SHU1YHL006C MUM3Q08750 479 aa12□□□□□ -0.49
SHU1YHL006C GAL3P13045 520 aa11.99□□□□□ -0.49
SHU1YHL006C SEC2P17065 759 aa11.99□□□□□ -0.49
SHU1YHL006C UGA1P17649 471 aa11.99□□□□□ -0.49
SHU1YHL006C LOT5P34234 306 aa11.99□□□□□ -0.49
SHU1YHL006C RLP7P40693 322 aaKnown RBP11.99□□□□□ -0.49
SHU1YHL006C ALG12P53730 551 aa11.99□□□□□ -0.49
SHU1YHL006C YNL181WP53878 407 aa11.99□□□□□ -0.49
SHU1YHL006C ARV1Q06541 321 aa11.99□□□□□ -0.49
SHU1YHL006C SFG1Q12507 346 aa11.99□□□□□ -0.49
SHU1YHL006C NFS1P25374 497 aa11.98□□□□□ -0.49
SHU1YHL006C TWF1P53250 332 aa11.98□□□□□ -0.49
SHU1YHL006C YNL033WP53964 284 aa11.98□□□□□ -0.49
SHU1YHL006C YNL019CP53975 284 aa11.98□□□□□ -0.49
SHU1YHL006C EKI1Q03764 534 aa11.98□□□□□ -0.49
SHU1YHL006C SNX41Q04053 625 aa11.98□□□□□ -0.49
SHU1YHL006C YDL211CQ12121 372 aa11.98□□□□□ -0.49
SHU1YHL006C PSY3Q12318 242 aa11.98□□□□□ -0.49
SHU1YHL006C STE6P12866 1290 aa11.97□□□□□ -0.49
SHU1YHL006C DBP3P20447 523 aaKnown RBP11.97□□□□□ -0.49
SHU1YHL006C ATP7P30902 174 aa11.97□□□□□ -0.49
SHU1YHL006C YNL195CP40168 261 aa11.97□□□□□ -0.49
SHU1YHL006C ALG5P40350 334 aa11.97□□□□□ -0.49
SHU1YHL006C YGR066CP53242 292 aa11.97□□□□□ -0.49
SHU1YHL006C KRE28Q04431 385 aa11.97□□□□□ -0.49
SHU1YHL006C SNX3Q08826 162 aaKnown RBP11.97□□□□□ -0.49
SHU1YHL006C RCN2Q12044 265 aa11.97□□□□□ -0.49
SHU1YHL006C YRA1Q12159 226 aaKnown RBP11.97□□□□□ -0.49
SHU1YHL006C YOR214CQ12282 236 aa11.97□□□□□ -0.49
SHU1YHL006C HMG1P12683 1054 aa11.96□□□□□ -0.49
SHU1YHL006C YEF1P32622 495 aa11.96□□□□□ -0.49
SHU1YHL006C TSL1P38427 1098 aaKnown RBP11.96□□□□□ -0.49
SHU1YHL006C YGR201CP42936 225 aa11.96□□□□□ -0.49
SHU1YHL006C YCL042WP25572 119 aa11.95□□□□□ -0.5
SHU1YHL006C MRP8P35719 219 aa11.95□□□□□ -0.5
SHU1YHL006C TDP1P38319 544 aa11.95□□□□□ -0.5
SHU1YHL006C MTC4P38335 694 aaKnown RBP11.95□□□□□ -0.5
SHU1YHL006C MIG2P53035 382 aa11.95□□□□□ -0.5
SHU1YHL006C SYF2P53277 215 aaPredicted RBP11.95□□□□□ -0.5
SHU1YHL006C YNR040WP53736 256 aa11.95□□□□□ -0.5
SHU1YHL006C HRI1Q05905 244 aaKnown RBP11.95□□□□□ -0.5
SHU1YHL006C PSR1Q07800 427 aa11.95□□□□□ -0.5
SHU1YHL006C RRT8Q08219 342 aa11.95□□□□□ -0.5
SHU1YHL006C CBP6P07253 162 aaPredicted RBP11.94□□□□□ -0.5
SHU1YHL006C MCM1P11746 286 aa11.94□□□□□ -0.5
SHU1YHL006C YMR262WP38430 313 aa11.94□□□□□ -0.5
SHU1YHL006C YHR218WP38899 603 aa11.94□□□□□ -0.5
SHU1YHL006C RSP5P39940 809 aaKnown RBP11.94□□□□□ -0.5
SHU1YHL006C SHO1P40073 367 aa11.94□□□□□ -0.5
SHU1YHL006C MET28P40573 187 aa11.94□□□□□ -0.5
SHU1YHL006C BRX1Q08235 291 aaKnown RBP11.94□□□□□ -0.5
SHU1YHL006C YIG1Q08956 461 aa11.94□□□□□ -0.5
SHU1YHL006C EHD3P28817 500 aa11.93□□□□□ -0.5
SHU1YHL006C PEX6P33760 1030 aa11.93□□□□□ -0.5
SHU1YHL006C CRR1Q05790 422 aa11.93□□□□□ -0.5
SHU1YHL006C ATG26Q06321 1198 aa11.93□□□□□ -0.5
SHU1YHL006C THP1Q08231 455 aa11.93□□□□□ -0.5
SHU1YHL006C MCP1Q12106 302 aa11.93□□□□□ -0.5
SHU1YHL006C ATP2P00830 511 aaKnown RBP11.92□□□□□ -0.5
SHU1YHL006C MDH2P22133 377 aa11.92□□□□□ -0.5
SHU1YHL006C DBP2P24783 546 aaKnown RBP11.92□□□□□ -0.5
SHU1YHL006C MGE1P38523 228 aa11.92□□□□□ -0.5
SHU1YHL006C PTH1P38876 190 aaKnown RBP11.92□□□□□ -0.5
SHU1YHL006C YHR219WP38900 624 aa11.92□□□□□ -0.5
SHU1YHL006C TMA22P47089 198 aaPredicted RBP11.92□□□□□ -0.5
SHU1YHL006C TOM22P49334 152 aa11.92□□□□□ -0.5
SHU1YHL006C GTB1Q04924 702 aa11.92□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms