RNA–Protein interactions for RNA: YGR110W

CLD1, Transcript of Mitochondrial cardiolipin-specific phospholipase, yeast

Gene CLD1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLD1	YGR110W	PDR10	P51533	1564 aa		4.59	□□□□□ -1.67
CLD1	YGR110W	POM152	P39685	1337 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	IQG1	Q12280	1495 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	TRP1	P00912	224 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	STF1	P01098	86 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	PHA2	P32452	334 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	SPH1	Q06160	661 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	TSR1	Q07381	788 aa	Known RBP	4.58	□□□□□ -1.68
CLD1	YGR110W	YOP1	Q12402	180 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	NBL1	Q3E7Y6	73 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	PDR12	Q02785	1511 aa		4.58	□□□□□ -1.68
CLD1	YGR110W	RFS1	P38234	210 aa	Known RBP	4.57	□□□□□ -1.68
CLD1	YGR110W	NUP157	P40064	1391 aa	Known RBP	4.57	□□□□□ -1.68
CLD1	YGR110W	BUD3	P25558	1636 aa		4.57	□□□□□ -1.68
CLD1	YGR110W	RPS8A	P0CX39	200 aa	Known RBP	4.56	□□□□□ -1.68
CLD1	YGR110W	RPS8B	P0CX40	200 aa	Known RBP	4.56	□□□□□ -1.68
CLD1	YGR110W	YEF1	P32622	495 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	SKT5	P34226	696 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	GPX2	P38143	162 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	YBL028C	P38202	106 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	PRO2	P54885	456 aa	Known RBP	4.56	□□□□□ -1.68
CLD1	YGR110W	AIM33	Q04516	312 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	PBA1	Q05778	276 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	ERV2	Q12284	196 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	AHC1	Q12433	566 aa		4.56	□□□□□ -1.68
CLD1	YGR110W	DBR1	P24309	405 aa	Known RBP	4.55	□□□□□ -1.68
CLD1	YGR110W	YAP3	P38749	330 aa		4.55	□□□□□ -1.68
CLD1	YGR110W	BOR1	P53838	576 aa		4.55	□□□□□ -1.68
CLD1	YGR110W	NUP116	Q02630	1113 aa		4.55	□□□□□ -1.68
CLD1	YGR110W	ELP3	Q02908	557 aa	Known RBP	4.55	□□□□□ -1.68
CLD1	YGR110W	GDB1	Q06625	1536 aa		4.55	□□□□□ -1.68
CLD1	YGR110W	MSK1	P32048	576 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	DPH5	P32469	300 aa	Predicted RBP	4.54	□□□□□ -1.68
CLD1	YGR110W	MCR1	P36060	302 aa	Known RBP	4.54	□□□□□ -1.68
CLD1	YGR110W	GEP4	P38812	185 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	SNL1	P40548	159 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	SCS3	P53012	380 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	MRM2	P53123	320 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	RET3	P53600	189 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	PRM1	P53835	661 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	YOR387C	Q08910	206 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	CEX1	Q12453	761 aa		4.54	□□□□□ -1.68
CLD1	YGR110W	AIM45	Q12480	344 aa	Known RBP	4.54	□□□□□ -1.68
CLD1	YGR110W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
CLD1	YGR110W	PHO2	P07269	559 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	RPS16A	P0CX51	143 aa	Known RBP	4.53	□□□□□ -1.68
CLD1	YGR110W	RPS16B	P0CX52	143 aa	Known RBP	4.53	□□□□□ -1.68
CLD1	YGR110W	THR4	P16120	514 aa	Known RBP	4.53	□□□□□ -1.68
CLD1	YGR110W	KAR9	P32526	644 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	TIR2	P33890	251 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	HST1	P53685	503 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	ADA2	Q02336	434 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	RRN11	Q04712	507 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	RTT103	Q05543	409 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	YTH1	Q06102	208 aa	Predicted RBP	4.53	□□□□□ -1.68
CLD1	YGR110W	MRPL35	Q06678	367 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	YOR338W	Q99326	363 aa		4.53	□□□□□ -1.68
CLD1	YGR110W	PDR15	Q04182	1529 aa	Known RBP	4.53	□□□□□ -1.68
CLD1	YGR110W	NAM9	P27929	486 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	SUR1	P33300	382 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	SDH3	P33421	198 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	SPT10	P35208	640 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	NDT80	P38830	627 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	OSW5	P40219	148 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	RRP46	P53256	223 aa	Predicted RBP	4.52	□□□□□ -1.69
CLD1	YGR110W	CWC25	P53854	179 aa	Known RBP	4.52	□□□□□ -1.69
CLD1	YGR110W	MDM36	Q06820	579 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	FSH3	Q99369	266 aa		4.52	□□□□□ -1.69
CLD1	YGR110W	SEC7	P11075	2009 aa	Known RBP	4.52	□□□□□ -1.69
CLD1	YGR110W	MAS1	P10507	462 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	TOA1	P32773	286 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	MNS1	P32906	549 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	COX14	P39103	70 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	PES4	P39684	611 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	YIL029C	P40538	142 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	IMP4	P53941	290 aa	Known RBP	4.51	□□□□□ -1.69
CLD1	YGR110W	HER2	Q03557	464 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	YMR310C	Q04867	317 aa	Predicted RBP	4.51	□□□□□ -1.69
CLD1	YGR110W	GAT3	Q07928	141 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	TMS1	Q12116	473 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	YCR024C-B	Q3E7Z8	88 aa		4.51	□□□□□ -1.69
CLD1	YGR110W	MLP2	P40457	1679 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	HXT2	P23585	541 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	GRR1	P24814	1151 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	CPR3	P25719	182 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	YUR1	P26725	428 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	DEG1	P31115	442 aa	Known RBP	4.5	□□□□□ -1.69
CLD1	YGR110W	SRB2	P34162	210 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	YBL059W	P34224	193 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	YHK8	P38776	514 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	LIN1	P38852	340 aa	Predicted RBP	4.5	□□□□□ -1.69
CLD1	YGR110W	PTH1	P38876	190 aa	Known RBP	4.5	□□□□□ -1.69
CLD1	YGR110W	LYS12	P40495	371 aa	Known RBP	4.5	□□□□□ -1.69
CLD1	YGR110W	SPG5	P42933	373 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	YJR085C	P47131	105 aa	Known RBP	4.5	□□□□□ -1.69
CLD1	YGR110W	ABZ2	Q03266	374 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	TDA1	Q03533	586 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	DNF3	Q12674	1656 aa		4.5	□□□□□ -1.69
CLD1	YGR110W	HHF1	P02309	103 aa	Known RBP	4.49	□□□□□ -1.69
CLD1	YGR110W	CLN3	P13365	580 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms