RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W CUE3P53137 624 aaKnown RBP2.09□□□□□ -2.07
NIC96YFR002W ALF1P53904 254 aa2.09□□□□□ -2.07
NIC96YFR002W ABZ2Q03266 374 aa2.09□□□□□ -2.07
NIC96YFR002W SFG1Q12507 346 aa2.09□□□□□ -2.07
NIC96YFR002W TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
NIC96YFR002W ASC1P38011 319 aaKnown RBP2.09□□□□□ -2.08
NIC96YFR002W ZTA1P38230 334 aaKnown RBP2.09□□□□□ -2.08
NIC96YFR002W WSS1P38838 269 aa2.09□□□□□ -2.08
NIC96YFR002W VAB2P40003 282 aa2.09□□□□□ -2.08
NIC96YFR002W MTM1P53320 366 aa2.09□□□□□ -2.08
NIC96YFR002W OCA2P53949 197 aa2.09□□□□□ -2.08
NIC96YFR002W HER2Q03557 464 aa2.09□□□□□ -2.08
NIC96YFR002W YDR387CQ04162 555 aa2.09□□□□□ -2.08
NIC96YFR002W MUM3Q08750 479 aa2.09□□□□□ -2.08
NIC96YFR002W VAM3Q12241 283 aa2.09□□□□□ -2.08
NIC96YFR002W COX3P00420 269 aa2.08□□□□□ -2.08
NIC96YFR002W RPL6BP05739 176 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W DAL2P25335 343 aa2.08□□□□□ -2.08
NIC96YFR002W PHO91P27514 894 aa2.08□□□□□ -2.08
NIC96YFR002W HIR2P32480 875 aa2.08□□□□□ -2.08
NIC96YFR002W SRB2P34162 210 aa2.08□□□□□ -2.08
NIC96YFR002W NTC20P38302 140 aaPredicted RBP2.08□□□□□ -2.08
NIC96YFR002W VHS2P40463 436 aa2.08□□□□□ -2.08
NIC96YFR002W RMD9P53140 646 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W YNL143CP53908 130 aa2.08□□□□□ -2.08
NIC96YFR002W RPL6AQ02326 176 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W RPN9Q04062 393 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W YMR130WQ04223 302 aa2.08□□□□□ -2.08
NIC96YFR002W MDM30Q05930 598 aa2.08□□□□□ -2.08
NIC96YFR002W TIM18Q08749 192 aa2.08□□□□□ -2.08
NIC96YFR002W PKH2Q12236 1081 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W UBA1P22515 1024 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W ARA1P38115 344 aa2.08□□□□□ -2.08
NIC96YFR002W AIP1P46680 615 aaKnown RBP2.08□□□□□ -2.08
NIC96YFR002W TSA2Q04120 196 aa2.08□□□□□ -2.08
NIC96YFR002W HSP31Q04432 237 aa2.08□□□□□ -2.08
NIC96YFR002W DCS1Q06151 350 aa2.08□□□□□ -2.08
NIC96YFR002W AEP3Q12089 606 aa2.08□□□□□ -2.08
NIC96YFR002W TRP1P00912 224 aa2.07□□□□□ -2.08
NIC96YFR002W RIP1P08067 215 aa2.07□□□□□ -2.08
NIC96YFR002W SEC63P14906 663 aa2.07□□□□□ -2.08
NIC96YFR002W TAL1P15019 335 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W OM45P16547 393 aa2.07□□□□□ -2.08
NIC96YFR002W DAL80P26343 269 aa2.07□□□□□ -2.08
NIC96YFR002W EPL1P43572 832 aa2.07□□□□□ -2.08
NIC96YFR002W SHY1P53266 389 aa2.07□□□□□ -2.08
NIC96YFR002W DSL1P53847 754 aa2.07□□□□□ -2.08
NIC96YFR002W AQR1P53943 586 aa2.07□□□□□ -2.08
NIC96YFR002W UTP6Q02354 440 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W NDL1Q06568 189 aa2.07□□□□□ -2.08
NIC96YFR002W DIS3Q08162 1001 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W WTM1Q12363 437 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W MTR10Q99189 972 aa2.07□□□□□ -2.08
NIC96YFR002W SPS4P09937 338 aa2.07□□□□□ -2.08
NIC96YFR002W NFT1P0CE68 1218 aa2.07□□□□□ -2.08
NIC96YFR002W SCH9P11792 824 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W APE2P32454 952 aaKnown RBP2.07□□□□□ -2.08
NIC96YFR002W REC114P32841 428 aa2.07□□□□□ -2.08
NIC96YFR002W MRPL40P36534 297 aa2.07□□□□□ -2.08
NIC96YFR002W RFC3P38629 340 aa2.07□□□□□ -2.08
NIC96YFR002W RPN14P53196 417 aa2.07□□□□□ -2.08
NIC96YFR002W YNR048WP53740 393 aa2.07□□□□□ -2.08
NIC96YFR002W FRE4P53746 719 aa2.07□□□□□ -2.08
NIC96YFR002W YMR181CQ03231 154 aa2.07□□□□□ -2.08
NIC96YFR002W YMR027WQ04371 470 aa2.07□□□□□ -2.08
NIC96YFR002W MSC3Q05812 728 aa2.07□□□□□ -2.08
NIC96YFR002W YLH47Q06493 454 aa2.07□□□□□ -2.08
NIC96YFR002W YFH1Q07540 174 aa2.07□□□□□ -2.08
NIC96YFR002W RKM1Q08961 583 aaPredicted RBP2.07□□□□□ -2.08
NIC96YFR002W YDR061WQ12298 539 aa2.07□□□□□ -2.08
NIC96YFR002W STE3P06783 470 aa2.06□□□□□ -2.08
NIC96YFR002W SLY1P22213 666 aa2.06□□□□□ -2.08
NIC96YFR002W SIN4P32259 974 aa2.06□□□□□ -2.08
NIC96YFR002W SSE1P32589 693 aaKnown RBP2.06□□□□□ -2.08
NIC96YFR002W MNS1P32906 549 aa2.06□□□□□ -2.08
NIC96YFR002W RTR1P40084 226 aaPredicted RBP2.06□□□□□ -2.08
NIC96YFR002W RSN1Q03516 953 aa2.06□□□□□ -2.08
NIC96YFR002W VPS20Q04272 221 aa2.06□□□□□ -2.08
NIC96YFR002W MED2Q12124 431 aa2.06□□□□□ -2.08
NIC96YFR002W CEX1Q12453 761 aa2.06□□□□□ -2.08
NIC96YFR002W CYC3P06182 269 aa2.06□□□□□ -2.08
NIC96YFR002W KRE2P27809 442 aa2.06□□□□□ -2.08
NIC96YFR002W BEM1P29366 551 aa2.06□□□□□ -2.08
NIC96YFR002W GDT1P38301 280 aaPredicted RBP2.06□□□□□ -2.08
NIC96YFR002W SAS2P40963 338 aa2.06□□□□□ -2.08
NIC96YFR002W YIP5P53108 310 aa2.06□□□□□ -2.08
NIC96YFR002W CWC25P53854 179 aaKnown RBP2.06□□□□□ -2.08
NIC96YFR002W SNX3Q08826 162 aaKnown RBP2.06□□□□□ -2.08
NIC96YFR002W NBL1Q3E7Y6 73 aa2.06□□□□□ -2.08
NIC96YFR002W HIS4P00815 799 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W GPH1P06738 902 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W ALG1P16661 449 aa2.05□□□□□ -2.08
NIC96YFR002W RPI1P23250 407 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W RDS1P25611 832 aa2.05□□□□□ -2.08
NIC96YFR002W RIM1P32445 135 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W MMS4P38257 691 aa2.05□□□□□ -2.08
NIC96YFR002W GPI16P38875 610 aa2.05□□□□□ -2.08
NIC96YFR002W YIF1P53845 314 aaKnown RBP2.05□□□□□ -2.08
NIC96YFR002W RNH1Q04740 348 aa2.05□□□□□ -2.08
NIC96YFR002W ORT1Q12375 292 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms