RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SPO23P33757 523 aa2.61□□□□□ -1.99
LOC1YFR001W GPI18P38211 433 aa2.61□□□□□ -1.99
LOC1YFR001W SPP381P38282 291 aaPredicted RBP2.61□□□□□ -1.99
LOC1YFR001W PFS1P38872 237 aa2.61□□□□□ -1.99
LOC1YFR001W KEG1P43614 200 aa2.61□□□□□ -1.99
LOC1YFR001W AIP1P46680 615 aaKnown RBP2.61□□□□□ -1.99
LOC1YFR001W PGU1P47180 361 aa2.61□□□□□ -1.99
LOC1YFR001W CCH1P50077 2039 aa2.6□□□□□ -1.99
LOC1YFR001W DEP1P31385 405 aa2.6□□□□□ -1.99
LOC1YFR001W SEO1P39709 593 aa2.6□□□□□ -1.99
LOC1YFR001W SEC27P41811 889 aaKnown RBP2.6□□□□□ -1.99
LOC1YFR001W IGD1P43598 195 aa2.6□□□□□ -1.99
LOC1YFR001W YPS5P53057 165 aa2.6□□□□□ -1.99
LOC1YFR001W ERO1Q03103 563 aa2.6□□□□□ -1.99
LOC1YFR001W VHS1Q03785 461 aa2.6□□□□□ -1.99
LOC1YFR001W YHC1Q05900 231 aaKnown RBP2.6□□□□□ -1.99
LOC1YFR001W MCT1Q12283 360 aa2.6□□□□□ -1.99
LOC1YFR001W SRN2Q99176 213 aa2.6□□□□□ -1.99
LOC1YFR001W CBP6P07253 162 aaPredicted RBP2.59□□□□□ -1.99
LOC1YFR001W RPS18AP0CX55 146 aaKnown RBP2.59□□□□□ -1.99
LOC1YFR001W RPS18BP0CX56 146 aaPredicted RBP2.59□□□□□ -1.99
LOC1YFR001W GIT1P25346 518 aa2.59□□□□□ -1.99
LOC1YFR001W LSM12P38828 187 aaKnown RBP2.59□□□□□ -1.99
LOC1YFR001W CIN2P46670 268 aa2.59□□□□□ -1.99
LOC1YFR001W MLC1P53141 149 aa2.59□□□□□ -1.99
LOC1YFR001W YGR018CP53211 109 aa2.59□□□□□ -1.99
LOC1YFR001W MKC7P53379 596 aa2.59□□□□□ -1.99
LOC1YFR001W REX2P54964 269 aaKnown RBP2.59□□□□□ -1.99
LOC1YFR001W FOL3Q12676 427 aaPredicted RBP2.59□□□□□ -1.99
LOC1YFR001W ADH1P00330 348 aaKnown RBP2.58□□□□□ -2
LOC1YFR001W CHA1P25379 360 aaKnown RBP2.58□□□□□ -2
LOC1YFR001W JEM1P40358 645 aa2.58□□□□□ -2
LOC1YFR001W SEC28P40509 296 aaKnown RBP2.58□□□□□ -2
LOC1YFR001W EPL1P43572 832 aa2.58□□□□□ -2
LOC1YFR001W TRF5P48561 642 aaKnown RBP2.58□□□□□ -2
LOC1YFR001W GAT3Q07928 141 aa2.58□□□□□ -2
LOC1YFR001W YBL111CQ3E7Y5 667 aa2.58□□□□□ -2
LOC1YFR001W STE7P06784 515 aa2.57□□□□□ -2
LOC1YFR001W MRPL8P22353 238 aa2.57□□□□□ -2
LOC1YFR001W PUP2P32379 260 aa2.57□□□□□ -2
LOC1YFR001W MRPL27P36526 146 aaPredicted RBP2.57□□□□□ -2
LOC1YFR001W MRPS9P38120 278 aa2.57□□□□□ -2
LOC1YFR001W YGL262WP53054 175 aa2.57□□□□□ -2
LOC1YFR001W VHT1P53241 593 aa2.57□□□□□ -2
LOC1YFR001W TPS1Q00764 495 aaKnown RBP2.57□□□□□ -2
LOC1YFR001W MSC3Q05812 728 aa2.57□□□□□ -2
LOC1YFR001W YFH1Q07540 174 aa2.57□□□□□ -2
LOC1YFR001W YPQ1Q12010 308 aa2.57□□□□□ -2
LOC1YFR001W CMK2P22517 447 aa2.56□□□□□ -2
LOC1YFR001W HEM14P40012 539 aa2.56□□□□□ -2
LOC1YFR001W CTK3P46963 296 aaPredicted RBP2.56□□□□□ -2
LOC1YFR001W SEH1P53011 349 aaKnown RBP2.56□□□□□ -2
LOC1YFR001W KTR6P54070 446 aa2.56□□□□□ -2
LOC1YFR001W PRP38Q00723 242 aaPredicted RBP2.56□□□□□ -2
LOC1YFR001W ENT5Q03769 411 aaKnown RBP2.56□□□□□ -2
LOC1YFR001W SFM1Q12314 213 aa2.56□□□□□ -2
LOC1YFR001W RPL6BP05739 176 aaKnown RBP2.55□□□□□ -2
LOC1YFR001W ECT1P33412 323 aa2.55□□□□□ -2
LOC1YFR001W SOL2P37262 315 aa2.55□□□□□ -2
LOC1YFR001W WSS1P38838 269 aa2.55□□□□□ -2
LOC1YFR001W VAC7P53950 1165 aa2.55□□□□□ -2
LOC1YFR001W RPL6AQ02326 176 aaKnown RBP2.55□□□□□ -2
LOC1YFR001W YLR177WQ06251 628 aa2.55□□□□□ -2
LOC1YFR001W YDR061WQ12298 539 aa2.55□□□□□ -2
LOC1YFR001W HMS1Q12398 434 aa2.55□□□□□ -2
LOC1YFR001W YOR338WQ99326 363 aa2.55□□□□□ -2
LOC1YFR001W FAB1P34756 2278 aa2.54□□□□□ -2
LOC1YFR001W HEM4P06174 275 aa2.54□□□□□ -2
LOC1YFR001W DAP2P18962 818 aa2.54□□□□□ -2
LOC1YFR001W RPL16AP26784 199 aaKnown RBP2.54□□□□□ -2
LOC1YFR001W PSO2P30620 661 aa2.54□□□□□ -2
LOC1YFR001W ANP1P32629 500 aa2.54□□□□□ -2
LOC1YFR001W YBL028CP38202 106 aa2.54□□□□□ -2
LOC1YFR001W WSC4P38739 605 aa2.54□□□□□ -2
LOC1YFR001W RET3P53600 189 aa2.54□□□□□ -2
LOC1YFR001W YMR010WQ03687 405 aa2.54□□□□□ -2
LOC1YFR001W ECM11Q04110 302 aa2.54□□□□□ -2
LOC1YFR001W YLH47Q06493 454 aa2.54□□□□□ -2
LOC1YFR001W YPR078CQ06813 372 aa2.54□□□□□ -2
LOC1YFR001W SHS1Q07657 551 aa2.54□□□□□ -2
LOC1YFR001W MAS2P11914 482 aa2.53□□□□□ -2
LOC1YFR001W EFB1P32471 206 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W SSE1P32589 693 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W TOA1P32773 286 aa2.53□□□□□ -2
LOC1YFR001W RXT2P38255 430 aa2.53□□□□□ -2
LOC1YFR001W YSW1P38280 609 aa2.53□□□□□ -2
LOC1YFR001W LYS12P40495 371 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W RPL21AQ02753 160 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W RNY1Q02933 434 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W FSH2Q05015 223 aa2.53□□□□□ -2
LOC1YFR001W MCH1Q07376 486 aa2.53□□□□□ -2
LOC1YFR001W PEX27Q08580 376 aa2.53□□□□□ -2
LOC1YFR001W YDL109CQ12103 647 aa2.53□□□□□ -2
LOC1YFR001W ATP16Q12165 160 aa2.53□□□□□ -2
LOC1YFR001W SKS1Q12505 502 aa2.53□□□□□ -2
LOC1YFR001W RPL21BQ12672 160 aaKnown RBP2.53□□□□□ -2
LOC1YFR001W RPL23AP0CX41 137 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W RPL23BP0CX42 137 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W SCH9P11792 824 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W DBR1P24309 405 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms