RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C SHS1Q07657 551 aa3.56□□□□□ -1.84
SHU2YDR078C LOT6Q07923 191 aa3.56□□□□□ -1.84
SHU2YDR078C YCR024C-BQ3E7Z8 88 aa3.56□□□□□ -1.84
SHU2YDR078C YLL053CP0CD98 152 aa3.55□□□□□ -1.84
SHU2YDR078C FAR1P21268 830 aa3.55□□□□□ -1.84
SHU2YDR078C ZUO1P32527 433 aaKnown RBP3.55□□□□□ -1.84
SHU2YDR078C CCT4P39078 528 aaKnown RBP3.55□□□□□ -1.84
SHU2YDR078C MNN9P39107 395 aaKnown RBP3.55□□□□□ -1.84
SHU2YDR078C SEC27P41811 889 aaKnown RBP3.55□□□□□ -1.84
SHU2YDR078C LOC1P43586 204 aaPredicted RBP3.55□□□□□ -1.84
SHU2YDR078C YGL260WP53056 76 aa3.55□□□□□ -1.84
SHU2YDR078C PRM6Q04705 352 aa3.55□□□□□ -1.84
SHU2YDR078C PBA1Q05778 276 aa3.55□□□□□ -1.84
SHU2YDR078C YLR297WQ05899 129 aa3.55□□□□□ -1.84
SHU2YDR078C GAT3Q07928 141 aa3.55□□□□□ -1.84
SHU2YDR078C YOL075CQ08234 1294 aa3.55□□□□□ -1.84
SHU2YDR078C APC5Q08683 685 aa3.55□□□□□ -1.84
SHU2YDR078C ERV2Q12284 196 aa3.55□□□□□ -1.84
SHU2YDR078C YDR262WQ12331 272 aa3.55□□□□□ -1.84
SHU2YDR078C YMR230W-AQ3E7B5 62 aa3.55□□□□□ -1.84
SHU2YDR078C MEX67Q99257 599 aaKnown RBP3.55□□□□□ -1.84
SHU2YDR078C PIS1P06197 220 aaKnown RBP3.54□□□□□ -1.84
SHU2YDR078C MXR2P25566 168 aa3.54□□□□□ -1.84
SHU2YDR078C RAD5P32849 1169 aaPredicted RBP3.54□□□□□ -1.84
SHU2YDR078C MRPS5P33759 307 aa3.54□□□□□ -1.84
SHU2YDR078C YHK8P38776 514 aa3.54□□□□□ -1.84
SHU2YDR078C KRE9P39005 276 aa3.54□□□□□ -1.84
SHU2YDR078C LCB3P47013 409 aa3.54□□□□□ -1.84
SHU2YDR078C CWC25P53854 179 aaKnown RBP3.54□□□□□ -1.84
SHU2YDR078C CUR1Q06469 252 aa3.54□□□□□ -1.84
SHU2YDR078C SMC5Q08204 1093 aa3.54□□□□□ -1.84
SHU2YDR078C EAF3Q12432 401 aa3.54□□□□□ -1.84
SHU2YDR078C RGS2Q99188 309 aa3.54□□□□□ -1.84
SHU2YDR078C HHF1P02309 103 aaKnown RBP3.53□□□□□ -1.84
SHU2YDR078C POP5P28005 173 aa3.53□□□□□ -1.84
SHU2YDR078C YBL059WP34224 193 aa3.53□□□□□ -1.84
SHU2YDR078C RTC2P38279 296 aa3.53□□□□□ -1.84
SHU2YDR078C PEX32P38292 413 aa3.53□□□□□ -1.84
SHU2YDR078C SWC5P38326 303 aa3.53□□□□□ -1.84
SHU2YDR078C ATG7P38862 630 aa3.53□□□□□ -1.84
SHU2YDR078C YHR218WP38899 603 aa3.53□□□□□ -1.84
SHU2YDR078C RTT105P40063 208 aa3.53□□□□□ -1.84
SHU2YDR078C ALF1P53904 254 aa3.53□□□□□ -1.84
SHU2YDR078C ELP3Q02908 557 aaKnown RBP3.53□□□□□ -1.84
SHU2YDR078C YMR102CQ03177 834 aa3.53□□□□□ -1.84
SHU2YDR078C CAB5Q03941 241 aa3.53□□□□□ -1.84
SHU2YDR078C NAT4Q04751 285 aa3.53□□□□□ -1.84
SHU2YDR078C YGK3Q12222 375 aaPredicted RBP3.53□□□□□ -1.84
SHU2YDR078C RPS8AP0CX39 200 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C RPS8BP0CX40 200 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C SPT15P13393 240 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C ARF2P19146 181 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C CIN8P27895 1000 aa3.52□□□□□ -1.85
SHU2YDR078C EBP2P36049 427 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C YHR131CP38835 850 aa3.52□□□□□ -1.85
SHU2YDR078C YHR182WP38870 785 aa3.52□□□□□ -1.85
SHU2YDR078C PTH1P38876 190 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C END3P39013 349 aa3.52□□□□□ -1.85
SHU2YDR078C MAM33P40513 266 aa3.52□□□□□ -1.85
SHU2YDR078C REE1P40893 198 aa3.52□□□□□ -1.85
SHU2YDR078C LST7P53237 242 aa3.52□□□□□ -1.85
SHU2YDR078C MTQ1P53944 314 aa3.52□□□□□ -1.85
SHU2YDR078C TDA1Q03533 586 aa3.52□□□□□ -1.85
SHU2YDR078C YDL114WQ07530 308 aa3.52□□□□□ -1.85
SHU2YDR078C PFK27Q12471 397 aaPredicted RBP3.52□□□□□ -1.85
SHU2YDR078C PCL9Q12477 304 aa3.52□□□□□ -1.85
SHU2YDR078C YIL002W-AQ3E7Z5 69 aa3.52□□□□□ -1.85
SHU2YDR078C DET1Q99288 334 aaKnown RBP3.52□□□□□ -1.85
SHU2YDR078C MSS116P15424 664 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C UTR1P21373 530 aa3.51□□□□□ -1.85
SHU2YDR078C ARO2P28777 376 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C YPS1P32329 569 aa3.51□□□□□ -1.85
SHU2YDR078C RFS1P38234 210 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C IST2P38250 946 aa3.51□□□□□ -1.85
SHU2YDR078C NDT80P38830 627 aa3.51□□□□□ -1.85
SHU2YDR078C BTT1P40314 149 aaPredicted RBP3.51□□□□□ -1.85
SHU2YDR078C MEP2P41948 499 aa3.51□□□□□ -1.85
SHU2YDR078C KEG1P43614 200 aa3.51□□□□□ -1.85
SHU2YDR078C MPP10P47083 593 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C AIM24P47127 394 aa3.51□□□□□ -1.85
SHU2YDR078C DBP6P53734 629 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C BOR1P53838 576 aa3.51□□□□□ -1.85
SHU2YDR078C EGD1Q02642 157 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C RTN1Q04947 295 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C MRPL35Q06678 367 aa3.51□□□□□ -1.85
SHU2YDR078C HTZ1Q12692 134 aaKnown RBP3.51□□□□□ -1.85
SHU2YDR078C RAD1P06777 1100 aa3.5□□□□□ -1.85
SHU2YDR078C NAM2P11325 894 aa3.5□□□□□ -1.85
SHU2YDR078C PUT4P15380 627 aa3.5□□□□□ -1.85
SHU2YDR078C CPR3P25719 182 aa3.5□□□□□ -1.85
SHU2YDR078C FUN26P31381 517 aa3.5□□□□□ -1.85
SHU2YDR078C PPQ1P32945 549 aa3.5□□□□□ -1.85
SHU2YDR078C RIB7P33312 244 aa3.5□□□□□ -1.85
SHU2YDR078C PAD1P33751 242 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SHU2YDR078C SPO23P33757 523 aa3.5□□□□□ -1.85
SHU2YDR078C MYO3P36006 1272 aa3.5□□□□□ -1.85
SHU2YDR078C RBG1P39729 369 aa3.5□□□□□ -1.85
SHU2YDR078C YJR085CP47131 105 aaKnown RBP3.5□□□□□ -1.85
SHU2YDR078C TRF5P48561 642 aaKnown RBP3.5□□□□□ -1.85
SHU2YDR078C NAS6P50086 228 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms