RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YGR161W-CQ3E744 92 aa3.84□□□□□ -1.79
PTA1YAL043C FLP1P03870 423 aa3.84□□□□□ -1.79
PTA1YAL043C ADE8P04161 214 aa3.84□□□□□ -1.79
PTA1YAL043C DAT1P13483 248 aaKnown RBP3.84□□□□□ -1.79
PTA1YAL043C RED1P14291 827 aa3.84□□□□□ -1.79
PTA1YAL043C MNE1P24720 663 aa3.84□□□□□ -1.79
PTA1YAL043C HCM1P25364 564 aa3.84□□□□□ -1.79
PTA1YAL043C IDH1P28834 360 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
PTA1YAL043C YHR177WP38867 453 aa3.84□□□□□ -1.79
PTA1YAL043C MLH1P38920 769 aa3.84□□□□□ -1.79
PTA1YAL043C GID8P40208 455 aa3.84□□□□□ -1.79
PTA1YAL043C ERG10P41338 398 aaKnown RBP3.84□□□□□ -1.79
PTA1YAL043C ATG18P43601 500 aa3.84□□□□□ -1.79
PTA1YAL043C YJL043WP47053 257 aa3.84□□□□□ -1.79
PTA1YAL043C IRC18P47056 224 aa3.84□□□□□ -1.79
PTA1YAL043C TPN1P53099 579 aa3.84□□□□□ -1.79
PTA1YAL043C MPC1P53157 130 aaKnown RBP3.84□□□□□ -1.79
PTA1YAL043C JAC1P53193 184 aa3.84□□□□□ -1.79
PTA1YAL043C CDH1P53197 566 aa3.84□□□□□ -1.79
PTA1YAL043C MTQ1P53944 314 aa3.84□□□□□ -1.79
PTA1YAL043C DID2P69771 204 aa3.84□□□□□ -1.79
PTA1YAL043C PLM2Q04383 521 aa3.84□□□□□ -1.79
PTA1YAL043C DCS1Q06151 350 aa3.84□□□□□ -1.79
PTA1YAL043C TEN1Q07921 160 aa3.84□□□□□ -1.79
PTA1YAL043C RAX1Q08760 435 aa3.84□□□□□ -1.79
PTA1YAL043C TY1A-BLQ12266 440 aa3.84□□□□□ -1.79
PTA1YAL043C GTT2Q12390 233 aa3.84□□□□□ -1.79
PTA1YAL043C FMP16Q12497 93 aa3.84□□□□□ -1.79
PTA1YAL043C YDL007C-AQ2V2Q0 85 aa3.84□□□□□ -1.79
PTA1YAL043C YEL009C-AA0A023PZF2 135 aa3.83□□□□□ -1.8
PTA1YAL043C SWI5P08153 709 aa3.83□□□□□ -1.8
PTA1YAL043C RPS21AP0C0V8 87 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C YCR016WP25617 290 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C NRP1P32770 719 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
PTA1YAL043C SPO23P33757 523 aa3.83□□□□□ -1.8
PTA1YAL043C GMH1P36125 273 aa3.83□□□□□ -1.8
PTA1YAL043C ALG3P38179 458 aa3.83□□□□□ -1.8
PTA1YAL043C PEX32P38292 413 aa3.83□□□□□ -1.8
PTA1YAL043C SOH1P38633 127 aa3.83□□□□□ -1.8
PTA1YAL043C ECM34P38728 170 aa3.83□□□□□ -1.8
PTA1YAL043C FCY21P40039 528 aa3.83□□□□□ -1.8
PTA1YAL043C YIL165CP40446 119 aa3.83□□□□□ -1.8
PTA1YAL043C MDM34P53083 459 aa3.83□□□□□ -1.8
PTA1YAL043C LSG1P53145 640 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C YGR266WP53326 701 aa3.83□□□□□ -1.8
PTA1YAL043C PRM1P53835 661 aa3.83□□□□□ -1.8
PTA1YAL043C YPL071CQ02864 156 aa3.83□□□□□ -1.8
PTA1YAL043C RIM13Q03792 727 aa3.83□□□□□ -1.8
PTA1YAL043C YPL199CQ08954 240 aa3.83□□□□□ -1.8
PTA1YAL043C YOR289WQ12012 251 aaPredicted RBP3.83□□□□□ -1.8
PTA1YAL043C TAO3P40468 2376 aa3.83□□□□□ -1.8
PTA1YAL043C ZWF1P11412 505 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C CHA1P25379 360 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C YCL049CP25577 312 aa3.83□□□□□ -1.8
PTA1YAL043C PRE4P30657 266 aa3.83□□□□□ -1.8
PTA1YAL043C OAC1P32332 324 aa3.83□□□□□ -1.8
PTA1YAL043C NTH1P32356 751 aa3.83□□□□□ -1.8
PTA1YAL043C MGM101P32787 269 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C MTC2P34246 357 aa3.83□□□□□ -1.8
PTA1YAL043C RPF2P36160 344 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C LEU5P38702 357 aa3.83□□□□□ -1.8
PTA1YAL043C GRE3P38715 327 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
PTA1YAL043C UBA4P38820 440 aa3.83□□□□□ -1.8
PTA1YAL043C FET3P38993 636 aa3.83□□□□□ -1.8
PTA1YAL043C VRG4P40107 337 aa3.83□□□□□ -1.8
PTA1YAL043C PRE6P40303 254 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C PAC11P40960 533 aa3.83□□□□□ -1.8
PTA1YAL043C BNA1P47096 177 aa3.83□□□□□ -1.8
PTA1YAL043C HAM1P47119 197 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C TOS2P50078 622 aa3.83□□□□□ -1.8
PTA1YAL043C SWC4P53201 476 aa3.83□□□□□ -1.8
PTA1YAL043C BUD17P53727 317 aa3.83□□□□□ -1.8
PTA1YAL043C YMR087WQ04299 284 aa3.83□□□□□ -1.8
PTA1YAL043C ARG7Q04728 441 aa3.83□□□□□ -1.8
PTA1YAL043C GUP2Q08929 609 aa3.83□□□□□ -1.8
PTA1YAL043C DIN7Q12086 430 aa3.83□□□□□ -1.8
PTA1YAL043C MED4Q12343 284 aa3.83□□□□□ -1.8
PTA1YAL043C PNS1Q12412 539 aa3.83□□□□□ -1.8
PTA1YAL043C YLR099W-AQ3E798 87 aa3.83□□□□□ -1.8
PTA1YAL043C MPD2Q99316 277 aa3.83□□□□□ -1.8
PTA1YAL043C HRP1Q99383 534 aaKnown RBP3.83□□□□□ -1.8
PTA1YAL043C ERD1P16151 362 aa3.82□□□□□ -1.8
PTA1YAL043C FPS1P23900 669 aa3.82□□□□□ -1.8
PTA1YAL043C SNC1P31109 117 aa3.82□□□□□ -1.8
PTA1YAL043C SPT14P32363 452 aa3.82□□□□□ -1.8
PTA1YAL043C CDC12P32468 407 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C PPQ1P32945 549 aa3.82□□□□□ -1.8
PTA1YAL043C YKL063CP35725 167 aa3.82□□□□□ -1.8
PTA1YAL043C ASC1P38011 319 aaKnown RBP3.82□□□□□ -1.8
PTA1YAL043C MRPL16P38064 232 aa3.82□□□□□ -1.8
PTA1YAL043C SAF1P38352 637 aa3.82□□□□□ -1.8
PTA1YAL043C MTG2P38860 518 aa3.82□□□□□ -1.8
PTA1YAL043C NVJ1P38881 321 aa3.82□□□□□ -1.8
PTA1YAL043C APQ12P40532 138 aa3.82□□□□□ -1.8
PTA1YAL043C IBA57P47158 497 aa3.82□□□□□ -1.8
PTA1YAL043C MRX6P48564 524 aa3.82□□□□□ -1.8
PTA1YAL043C COS12P53053 380 aa3.82□□□□□ -1.8
PTA1YAL043C RRN9P53437 365 aa3.82□□□□□ -1.8
PTA1YAL043C SNO2P53823 222 aa3.82□□□□□ -1.8
PTA1YAL043C IPI3P53877 555 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms