RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ERMNQ8TAM6 284 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 TRAPPC12Q8WVT3 735 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 VWCEQ96DN2 955 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 JPH2Q9BR39 696 aaPredicted RBP26.12■■□□□ 1.77
SUMO3-205ENST00000466861 TUFT1Q9NNX1 390 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 FOXD4L1Q9NU39 408 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 PCDH10Q9P2E7 1040 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 SQORQ9Y6N5 450 aa26.12■■□□□ 1.77
SUMO3-205ENST00000466861 SLITRK3O94933 977 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 XRCC6P12956 609 aaKnown RBP eCLIP26.11■■□□□ 1.77
SUMO3-205ENST00000466861 TMOD1P28289 359 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 TECP42680 631 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 GPNMBQ14956 572 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 C9orf50Q5SZB4 431 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 DNAJB3Q8WWF6 145 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 DYDC2Q96IM9 177 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 POLR3CQ9BUI4 534 aaPredicted RBP26.11■■□□□ 1.77
SUMO3-205ENST00000466861 RGL1Q9NZL6 768 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 SEPT9Q9UHD8 586 aaPredicted RBP26.11■■□□□ 1.77
SUMO3-205ENST00000466861 KDM3AQ9Y4C1 1321 aa26.11■■□□□ 1.77
SUMO3-205ENST00000466861 DDX11L8A8MPP1 907 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 MRPS6P82932 125 aaKnown RBP26.1■■□□□ 1.77
SUMO3-205ENST00000466861 MGAT3Q09327 533 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 RESTQ13127 1097 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 BECN1Q14457 450 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 HAUS3Q68CZ6 603 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 ANO5Q75V66 913 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 IGSF22Q8N9C0 903 aa26.1■■□□□ 1.77
SUMO3-205ENST00000466861 POTEMA6NI47 508 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 M0QZ92 97 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 NBNO60934 754 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 EFCAB14O75071 495 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 BAIAP3O94812 1187 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 ACRP10323 421 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 RPA1P27694 616 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 TBC1D8BQ0IIM8 1120 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 CNKSR3Q6P9H4 555 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 DTHD1Q6ZMT9 781 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 DEFB128Q7Z7B8 93 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 KIAA0319LQ8IZA0 1049 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 LINC01465Q8N7H1 131 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 USP38Q8NB14 1042 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 RNPC3Q96LT9 517 aaKnown RBP26.09■■□□□ 1.77
SUMO3-205ENST00000466861 CEP89Q96ST8 783 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 ANKEF1Q9NU02 776 aa26.09■■□□□ 1.77
SUMO3-205ENST00000466861 CHRNA1P02708 482 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 YWHABP31946 246 aaKnown RBP26.08■■□□□ 1.77
SUMO3-205ENST00000466861 MBTPS1Q14703 1052 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 FERMT3Q86UX7 667 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 TPH2Q8IWU9 490 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 FTOQ9C0B1 505 aaKnown RBP eCLIP26.08■■□□□ 1.771e-10■□□□□ 10.5
SUMO3-205ENST00000466861 CYP26B1Q9NR63 512 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 WRAP73Q9P2S5 460 aaPredicted RBP26.08■■□□□ 1.77
SUMO3-205ENST00000466861 TRPV2Q9Y5S1 764 aa26.08■■□□□ 1.77
SUMO3-205ENST00000466861 IGKV6-21A0A0C4DH24 114 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 GAS2O43903 313 aaKnown RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 RFC5P40937 340 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 CDC42EP1Q00587 391 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 CYP4A11Q02928 519 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 CTTNQ14247 550 aaKnown RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 MTERF2Q49AM1 385 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 EFCAB12Q6NXP0 572 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 TRMT1LQ7Z2T5 733 aaKnown RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 FAM49AQ9H0Q0 323 aaPredicted RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 CDY2AQ9Y6F7 541 aa26.07■■□□□ 1.76
SUMO3-205ENST00000466861 MORC2Q9Y6X9 1032 aaPredicted RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 RANBP2P49792 3224 aaKnown RBP26.07■■□□□ 1.76
SUMO3-205ENST00000466861 ABHD14A-ACY1A0A1B0GW23 586 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 CTSHP09668 335 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 SPATA31C1P0DKV0 1188 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 PLEKHG4Q58EX7 1191 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 KCTD17Q8N5Z5 321 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 APBB2Q92870 758 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 MAP7D2Q96T17 732 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 CELF4Q9BZC1 486 aaKnown RBP26.06■■□□□ 1.76
SUMO3-205ENST00000466861 LRWD1Q9UFC0 647 aa26.06■■□□□ 1.76
SUMO3-205ENST00000466861 SIP14410 1827 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 MAFO75444 373 aaPredicted RBP26.05■■□□□ 1.76
SUMO3-205ENST00000466861 CATSPER3Q86XQ3 398 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 METTL13Q8N6R0 699 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 SEPT8Q92599 483 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 ZBTB10Q96DT7 871 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 CEP170P1Q96L14 293 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 NACC1Q96RE7 527 aa26.05■■□□□ 1.76
SUMO3-205ENST00000466861 ARID2Q68CP9 1835 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 LOXHD1Q8IVV2 1947 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 SLC26A4O43511 780 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 DNM2P50570 870 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 FBXO47Q5MNV8 452 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 ODR4Q5SWX8 454 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 OTOP2Q7RTS6 562 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 SLC7A3Q8WY07 619 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 AK8Q96MA6 479 aa26.04■■□□□ 1.76
SUMO3-205ENST00000466861 DHX33Q9H6R0 707 aaKnown RBP26.04■■□□□ 1.76
SUMO3-205ENST00000466861 DBR1Q9UK59 544 aaKnown RBP26.04■■□□□ 1.76
SUMO3-205ENST00000466861 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.03■■□□□ 1.76
SUMO3-205ENST00000466861 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.03■■□□□ 1.76
SUMO3-205ENST00000466861 SMAD3P84022 425 aaKnown RBP26.03■■□□□ 1.76
SUMO3-205ENST00000466861 IKBKEQ14164 716 aa26.03■■□□□ 1.76
SUMO3-205ENST00000466861 SF3A1Q15459 793 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms