RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MEIS1O00470 390 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 BMP6P22004 513 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 PAX7P23759 505 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 RWDD2BP57060 319 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 KLC1Q07866 573 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ABTB1Q969K4 478 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 CYTH2Q99418 400 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 NAB2Q15742 525 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ST13P4Q8IZP2 240 aaPredicted RBP17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ZFP69BQ9UJL9 534 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
CLSTN1-201ENST00000361311 A0A0G2JND7 137 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 SKAP2O75563 359 aaPredicted RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 DHX34Q14147 1143 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 SYT2Q8N9I0 419 aaPredicted RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 FGD4Q96M96 766 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 CYP27B1O15528 508 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 GAS7O60861 476 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 DBN1Q16643 649 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 RAD54LQ92698 747 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 UBE2TQ9NPD8 197 aaPredicted RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 CFBP00751 764 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 TMEM139Q8IV31 216 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 PAF1Q8N7H5 531 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 CPVLQ9H3G5 476 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 GOLPH3Q9H4A6 298 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 ZBTB1Q9Y2K1 713 aa17.21■□□□□ 0.35
CLSTN1-201ENST00000361311 K7ENM7 598 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 CDR2Q01850 454 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 CCDC137Q6PK04 289 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 TSEN2Q8NCE0 465 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 FGFR1OP2Q9NVK5 253 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 NSFP46459 744 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 DYDC2Q96IM9 177 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 CELF4Q9BZC1 486 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 USP40Q9NVE5 1235 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 BCAP29Q9UHQ4 241 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 INHBAP08476 426 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 LONP2Q86WA8 852 aa17.2■□□□□ 0.34
CLSTN1-201ENST00000361311 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 ZSCAN5CA6NGD5 496 aaPredicted RBP17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 UFL1O94874 794 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 GLYCTKQ8IVS8 523 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 RFFLQ8WZ73 363 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 DBR1Q9UK59 544 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 CYP2D6P10635 497 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 NTRK3Q16288 839 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 ANKRD20A8PQ5CZ79 823 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 FUKQ8N0W3 1084 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 FRMPD1Q5SYB0 1578 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 MYBL2P10244 700 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 C7orf25Q9BPX7 421 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 TRIM55Q9BYV6 548 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 DCTN4Q9UJW0 460 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
CLSTN1-201ENST00000361311 PDE2AO00408 941 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 GAP43P17677 238 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 USP11P51784 963 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 MFAP3P55082 362 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 PDIA6Q15084 440 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 NUF2Q9BZD4 464 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 EPB41L4AQ9HCS5 686 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 MT-ND3P03897 115 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms