RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PPP4R3CPQ6ZMV5 832 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 IFNLR1Q8IU57 520 aaPredicted RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 RPUSD2Q8IZ73 545 aaKnown RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 PRIMPOLQ96LW4 560 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 C7orf25Q9BPX7 421 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 NAT10Q9H0A0 1025 aaKnown RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 UNC93B1Q9H1C4 597 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 ST6GALNAC4Q9H4F1 302 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 FLRT1Q9NZU1 646 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 STK39Q9UEW8 545 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 SEPT9Q9UHD8 586 aaPredicted RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 PCDHA7Q9UN72 937 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 PCDHB13Q9Y5F0 798 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 FRMPD3Q5JV73 1810 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 EIF3DO15371 548 aaKnown RBP eCLIP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 HOXA2O43364 376 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 MAFO75444 373 aaPredicted RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 COL6A1P12109 1028 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 CTGFP29279 349 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 RAB27AP51159 221 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 SPIRE1Q08AE8 756 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 UTP14CQ5TAP6 766 aaKnown RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 SWSAP1Q6NVH7 229 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 ANKRD33Q7Z3H0 272 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 NOC3LQ8WTT2 800 aaKnown RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 SHISA4Q96DD7 197 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 DYDC2Q96IM9 177 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 CEP170P1Q96L14 293 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 GSDMAQ96QA5 445 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 FTHL17Q9BXU8 183 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 GCOM2Q9BZD3 368 aaPredicted RBP5.74□□□□□ -1.49
LRIT3-201ENST00000327908 CSRNP2Q9H175 543 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 TMEM134Q9H6X4 195 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 CYP26B1Q9NR63 512 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 ASTN1O14525 1302 aa5.74□□□□□ -1.49
LRIT3-201ENST00000327908 RGS20O76081 388 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 PLA2G4BP0C869 781 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SFPQP23246 707 aaKnown RBP eCLIP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 HOXC8P31273 242 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 NAMPTP43490 491 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 DMP1Q13316 513 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 ITGA7Q13683 1181 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 PLCB4Q15147 1175 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SURF1Q15526 300 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 GRIK4Q16099 956 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 LY6KQ17RY6 165 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 FAM26DQ5JW98 314 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 CCDC183Q5T5S1 534 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TPH2Q8IWU9 490 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SPRYD3Q8NCJ5 442 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TRPV1Q8NER1 839 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SYMPKQ92797 1274 aaKnown RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 DEFB118Q96PH6 123 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TSG101Q99816 390 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TMEM60Q9H2L4 133 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TMEM206Q9H813 350 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 KIAA1586Q9HCI6 787 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 C1orf112Q9NSG2 853 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 EXOC1Q9NV70 894 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 GTF2IRD1Q9UHL9 959 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 HPSEQ9Y251 543 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 ZDHHC9Q9Y397 364 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TRPV2Q9Y5S1 764 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 BICDL2A1A5D9 508 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 MBLAC1A4D2B0 266 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 CCND3P30281 292 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 MCM4P33991 863 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 PPIGQ13427 754 aaKnown RBP eCLIP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 KCNA10Q16322 511 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 AXDND1Q5T1B0 1012 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 LHX8Q68G74 356 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SLFN12LQ6IEE8 588 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 UNC13DQ70J99 1090 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TNS4Q8IZW8 715 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 CHST12Q9NRB3 414 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 PRMT7Q9NVM4 692 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 DAAM1Q9Y4D1 1078 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 A0A1W2PQ45 241 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 A0A1W2PQY0 241 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 ARHGEF37A1IGU5 675 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 N4BP3O15049 544 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 CHMP2AO43633 222 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SMIM10L2AP0DMW4 78 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SMIM10L2BP0DMW5 78 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 STRN3Q13033 797 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 CCSAPQ6IQ19 270 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 PADI6Q6TGC4 694 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 KRBA2Q6ZNG9 492 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 EEPD1Q7L9B9 569 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 SMARCE1Q969G3 411 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 NUP62CLQ9H1M0 184 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 DHX33Q9H6R0 707 aaKnown RBP5.73□□□□□ -1.49
LRIT3-201ENST00000327908 UBN1Q9NPG3 1134 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 TUBE1Q9UJT0 475 aa5.73□□□□□ -1.49
LRIT3-201ENST00000327908 ASGR1P07306 291 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 TPM2P07951 284 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PFKFB1P16118 471 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PPP2R3AQ06190 1150 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 EMC2Q15006 297 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 TARBP2Q15633 366 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms