RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 RUP1Q12242 671 aa2.35□□□□□ -2.03
snR43snR43 MDY2Q12285 212 aa2.35□□□□□ -2.03
snR43snR43 YOS9Q99220 542 aa2.35□□□□□ -2.03
snR43snR43 TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
snR43snR43 Q0010Q9ZZX9 128 aa2.35□□□□□ -2.03
snR43snR43 HEM2P05373 342 aa2.34□□□□□ -2.03
snR43snR43 STE7P06784 515 aa2.34□□□□□ -2.03
snR43snR43 CMD1P06787 147 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 CAR2P07991 424 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 YSF3P0C074 85 aaPredicted RBP2.34□□□□□ -2.03
snR43snR43 GCD2P12754 651 aaPredicted RBP2.34□□□□□ -2.03
snR43snR43 SPO16P17122 198 aa2.34□□□□□ -2.03
snR43snR43 SRV2P17555 526 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 DAP2P18962 818 aa2.34□□□□□ -2.03
snR43snR43 ROX1P25042 368 aa2.34□□□□□ -2.03
snR43snR43 ERG9P29704 444 aa2.34□□□□□ -2.03
snR43snR43 PTR2P32901 601 aa2.34□□□□□ -2.03
snR43snR43 RPS1AP33442 255 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 MTR2P34232 184 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 BYE1P36106 594 aa2.34□□□□□ -2.03
snR43snR43 BMT2P38278 337 aa2.34□□□□□ -2.03
snR43snR43 YGP1P38616 354 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 SSZ1P38788 538 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 APE4P38821 490 aa2.34□□□□□ -2.03
snR43snR43 YIL001WP40560 513 aa2.34□□□□□ -2.03
snR43snR43 GPP1P41277 250 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 GCD10P41814 478 aa2.34□□□□□ -2.03
snR43snR43 MIC19P43594 170 aa2.34□□□□□ -2.03
snR43snR43 RPE1P46969 238 aa2.34□□□□□ -2.03
snR43snR43 YGR079WP53249 370 aa2.34□□□□□ -2.03
snR43snR43 IBD2P53892 351 aa2.34□□□□□ -2.03
snR43snR43 EFR3Q03653 782 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 HPT1Q04178 221 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 URH1Q04179 340 aa2.34□□□□□ -2.03
snR43snR43 VTI1Q04338 217 aa2.34□□□□□ -2.03
snR43snR43 YMR027WQ04371 470 aa2.34□□□□□ -2.03
snR43snR43 SML1Q04964 104 aa2.34□□□□□ -2.03
snR43snR43 RQC1Q05468 723 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 YPR172WQ06608 200 aa2.34□□□□□ -2.03
snR43snR43 YOL019WQ08157 551 aa2.34□□□□□ -2.03
snR43snR43 ESA1Q08649 445 aa2.34□□□□□ -2.03
snR43snR43 YOR365CQ08844 703 aa2.34□□□□□ -2.03
snR43snR43 NCE102Q12207 173 aaRIP-Chip data2.34□□□□□ -2.03not detected
snR43snR43 AHA1Q12449 350 aaKnown RBP2.34□□□□□ -2.03
snR43snR43 YPL247CQ12523 523 aa2.34□□□□□ -2.03
snR43snR43 YCL012CQ8J0M4 134 aa2.34□□□□□ -2.03
snR43snR43 HXK2P04807 486 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 RPL20AP0CX23 172 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 RPL20BP0CX24 172 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 SPS100P13130 326 aa2.33□□□□□ -2.04
snR43snR43 STE12P13574 688 aa2.33□□□□□ -2.04
snR43snR43 RPI1P23250 407 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 SGV1P23293 657 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 PTC6P25646 442 aa2.33□□□□□ -2.04
snR43snR43 YCR090CP25654 182 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 ZIP1P31111 875 aa2.33□□□□□ -2.04
snR43snR43 COX13P32799 129 aa2.33□□□□□ -2.04
snR43snR43 EMP70P32802 667 aa2.33□□□□□ -2.04
snR43snR43 UBC6P33296 250 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 MFT1P33441 392 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 LOT5P34234 306 aa2.33□□□□□ -2.04
snR43snR43 TUL1P36096 758 aa2.33□□□□□ -2.04
snR43snR43 SET3P36124 751 aa2.33□□□□□ -2.04
snR43snR43 MNN2P38069 597 aa2.33□□□□□ -2.04
snR43snR43 ETR1P38071 380 aa2.33□□□□□ -2.04
snR43snR43 FAT1P38225 669 aa2.33□□□□□ -2.04
snR43snR43 GRE3P38715 327 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
snR43snR43 TRR2P38816 342 aa2.33□□□□□ -2.04
snR43snR43 CAJ1P39101 391 aa2.33□□□□□ -2.04
snR43snR43 YHB1P39676 399 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 SSP120P39931 234 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 YMR144WP40214 342 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 YRB1P41920 201 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 APS3P47064 194 aa2.33□□□□□ -2.04
snR43snR43 NOP9P47077 666 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 YJR039WP47107 1121 aa2.33□□□□□ -2.04
snR43snR43 YJR120WP47157 116 aa2.33□□□□□ -2.04
snR43snR43 YJR141WP47172 347 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 PGU1P47180 361 aa2.33□□□□□ -2.04
snR43snR43 ATP22P50273 684 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 UBC11P52492 156 aa2.33□□□□□ -2.04
snR43snR43 EFM5P53200 248 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 LSC1P53598 329 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 YLR460CP54007 376 aa2.33□□□□□ -2.04
snR43snR43 CSN9Q03981 162 aa2.33□□□□□ -2.04
snR43snR43 API2Q04413 109 aa2.33□□□□□ -2.04
snR43snR43 SMA2Q04658 369 aa2.33□□□□□ -2.04
snR43snR43 YLR446WQ06204 433 aa2.33□□□□□ -2.04
snR43snR43 RIF2Q06208 395 aa2.33□□□□□ -2.04
snR43snR43 YPR091CQ06833 770 aa2.33□□□□□ -2.04
snR43snR43 YET3Q07451 203 aa2.33□□□□□ -2.04
snR43snR43 RSA1Q08932 381 aa2.33□□□□□ -2.04
snR43snR43 YTM1Q12024 460 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 RIO1Q12196 484 aaKnown RBP2.33□□□□□ -2.04
snR43snR43 YRM1Q12340 786 aa2.33□□□□□ -2.04
snR43snR43 PRP46Q12417 451 aaPredicted RBP2.33□□□□□ -2.04
snR43snR43 RGS2Q99188 309 aa2.33□□□□□ -2.04
snR43snR43 MTR10Q99189 972 aa2.33□□□□□ -2.04
snR43snR43 YOR019WQ99248 730 aa2.33□□□□□ -2.04
snR43snR43 Q0297Q9ZZV8 51 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms