RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C MMF1P40185 145 aaKnown RBP2.8□□□□□ -1.96
RPC40YPR110C TOS3P43637 560 aa2.8□□□□□ -1.96
RPC40YPR110C YIP5P53108 310 aa2.8□□□□□ -1.96
RPC40YPR110C MTM1P53320 366 aa2.8□□□□□ -1.96
RPC40YPR110C HER2Q03557 464 aa2.8□□□□□ -1.96
RPC40YPR110C PGC1Q08959 321 aa2.8□□□□□ -1.96
RPC40YPR110C YDR061WQ12298 539 aa2.8□□□□□ -1.96
RPC40YPR110C HHF1P02309 103 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C SPT15P13393 240 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C PHO84P25297 587 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C KAR9P32526 644 aa2.79□□□□□ -1.96
RPC40YPR110C CHK1P38147 527 aa2.79□□□□□ -1.96
RPC40YPR110C KAP104P38217 918 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C PRM5P40476 318 aa2.79□□□□□ -1.96
RPC40YPR110C YIL067CP40514 678 aa2.79□□□□□ -1.96
RPC40YPR110C REE1P40893 198 aa2.79□□□□□ -1.96
RPC40YPR110C PMT5P52867 743 aa2.79□□□□□ -1.96
RPC40YPR110C YGR117CP53270 476 aa2.79□□□□□ -1.96
RPC40YPR110C ECM7Q06200 448 aa2.79□□□□□ -1.96
RPC40YPR110C DBP9Q06218 594 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C TLG2Q08144 397 aa2.79□□□□□ -1.96
RPC40YPR110C AAD15Q08361 143 aa2.79□□□□□ -1.96
RPC40YPR110C CUE5Q08412 411 aaKnown RBP2.79□□□□□ -1.96
RPC40YPR110C TFB5Q3E7C1 72 aaPredicted RBP2.79□□□□□ -1.96
RPC40YPR110C ULS1Q08562 1619 aa2.79□□□□□ -1.96
RPC40YPR110C SNQ2P32568 1501 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C TSC11P40061 1430 aa2.78□□□□□ -1.96
RPC40YPR110C TRM732Q03496 1420 aa2.78□□□□□ -1.96
RPC40YPR110C PAB1P04147 577 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96 RIP-Chip
RPC40YPR110C ATP1P07251 545 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C ARF1P11076 181 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C CBS2P14905 389 aa2.78□□□□□ -1.96
RPC40YPR110C UBA1P22515 1024 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C EXG1P23776 448 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C KRR1P25586 316 aaPredicted RBP2.78□□□□□ -1.96
RPC40YPR110C RDS1P25611 832 aa2.78□□□□□ -1.96
RPC40YPR110C ARO2P28777 376 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C PHA2P32452 334 aa2.78□□□□□ -1.96
RPC40YPR110C ANP1P32629 500 aa2.78□□□□□ -1.96
RPC40YPR110C PAD1P33751 242 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
RPC40YPR110C SIF2P38262 535 aa2.78□□□□□ -1.96
RPC40YPR110C MNL1P38888 796 aa2.78□□□□□ -1.96
RPC40YPR110C FYV8P46949 817 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C TOS2P50078 622 aa2.78□□□□□ -1.96
RPC40YPR110C RRN9P53437 365 aa2.78□□□□□ -1.96
RPC40YPR110C COS1P53822 381 aa2.78□□□□□ -1.96
RPC40YPR110C ELP3Q02908 557 aaKnown RBP2.78□□□□□ -1.96
RPC40YPR110C CCE1Q03702 353 aa2.78□□□□□ -1.96
RPC40YPR110C SMA2Q04658 369 aa2.78□□□□□ -1.96
RPC40YPR110C PBA1Q05778 276 aa2.78□□□□□ -1.96
RPC40YPR110C NCA2Q12374 616 aa2.78□□□□□ -1.96
RPC40YPR110C NBL1Q3E7Y6 73 aa2.78□□□□□ -1.96
RPC40YPR110C PDR15Q04182 1529 aaKnown RBP2.78□□□□□ -1.97
RPC40YPR110C TRP1P00912 224 aa2.77□□□□□ -1.97
RPC40YPR110C OPI3P05375 206 aa2.77□□□□□ -1.97
RPC40YPR110C SUP35P05453 685 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C CYC3P06182 269 aa2.77□□□□□ -1.97
RPC40YPR110C CAP2P13517 287 aa2.77□□□□□ -1.97
RPC40YPR110C SLM5P25345 492 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C YEF1P32622 495 aa2.77□□□□□ -1.97
RPC40YPR110C YBL059WP34224 193 aa2.77□□□□□ -1.97
RPC40YPR110C SKT5P34226 696 aa2.77□□□□□ -1.97
RPC40YPR110C YKL097CP34245 136 aa2.77□□□□□ -1.97
RPC40YPR110C YBL028CP38202 106 aa2.77□□□□□ -1.97
RPC40YPR110C RFS1P38234 210 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C WWM1P43582 211 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C YPI1P43587 155 aa2.77□□□□□ -1.97
RPC40YPR110C NCA3P46955 337 aa2.77□□□□□ -1.97
RPC40YPR110C YNR068CP53754 272 aa2.77□□□□□ -1.97
RPC40YPR110C UTP6Q02354 440 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C YDR286CQ05530 114 aa2.77□□□□□ -1.97
RPC40YPR110C MDM36Q06820 579 aa2.77□□□□□ -1.97
RPC40YPR110C TSR1Q07381 788 aaKnown RBP2.77□□□□□ -1.97
RPC40YPR110C NDE2Q07500 545 aa2.77□□□□□ -1.97
RPC40YPR110C SFG1Q12507 346 aa2.77□□□□□ -1.97
RPC40YPR110C YRF1-1P0CX20 1796 aa2.77□□□□□ -1.97
RPC40YPR110C YRF1-5P0CX21 1796 aa2.77□□□□□ -1.97
RPC40YPR110C YRF1-8P0CX22 1796 aa2.77□□□□□ -1.97
RPC40YPR110C POM152P39685 1337 aa2.76□□□□□ -1.97
RPC40YPR110C RNA1P11745 407 aaKnown RBP2.76□□□□□ -1.97
RPC40YPR110C YEL043WP32618 956 aa2.76□□□□□ -1.97
RPC40YPR110C COX13P32799 129 aa2.76□□□□□ -1.97
RPC40YPR110C SPT10P35208 640 aa2.76□□□□□ -1.97
RPC40YPR110C DOA1P36037 715 aa2.76□□□□□ -1.97
RPC40YPR110C MCR1P36060 302 aaKnown RBP2.76□□□□□ -1.97
RPC40YPR110C AVT5P38176 459 aa2.76□□□□□ -1.97
RPC40YPR110C SPP381P38282 291 aaPredicted RBP2.76□□□□□ -1.97
RPC40YPR110C SBE22P38814 852 aa2.76□□□□□ -1.97
RPC40YPR110C YHR177WP38867 453 aa2.76□□□□□ -1.97
RPC40YPR110C ATM1P40416 690 aa2.76□□□□□ -1.97
RPC40YPR110C NAS2P40555 220 aa2.76□□□□□ -1.97
RPC40YPR110C RPA34P47006 233 aaPredicted RBP2.76□□□□□ -1.97
RPC40YPR110C EFM3P47163 339 aa2.76□□□□□ -1.97
RPC40YPR110C YGL242CP53066 181 aa2.76□□□□□ -1.97
RPC40YPR110C BTN2P53286 410 aa2.76□□□□□ -1.97
RPC40YPR110C CWC25P53854 179 aaKnown RBP2.76□□□□□ -1.97
RPC40YPR110C YNL143CP53908 130 aa2.76□□□□□ -1.97
RPC40YPR110C LDS2Q08218 356 aa2.76□□□□□ -1.97
RPC40YPR110C YOR387CQ08910 206 aa2.76□□□□□ -1.97
RPC40YPR110C PSY3Q12318 242 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms