RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C TAF14P35189 244 aa7.77□□□□□ -1.17
SRP54YPR088C TRR2P38816 342 aa7.77□□□□□ -1.17
SRP54YPR088C PRE6P40303 254 aaKnown RBP7.77□□□□□ -1.17
SRP54YPR088C YIL086CP40503 102 aa7.77□□□□□ -1.17
SRP54YPR088C ROM1P53046 1155 aa7.77□□□□□ -1.17
SRP54YPR088C MON1P53129 644 aa7.77□□□□□ -1.17
SRP54YPR088C NRM1P53718 249 aa7.77□□□□□ -1.17
SRP54YPR088C NAT4Q04751 285 aa7.77□□□□□ -1.17
SRP54YPR088C RNH202Q05635 350 aa7.77□□□□□ -1.17
SRP54YPR088C YPR172WQ06608 200 aa7.77□□□□□ -1.17
SRP54YPR088C YPR091CQ06833 770 aa7.77□□□□□ -1.17
SRP54YPR088C NFI1Q12216 726 aa7.77□□□□□ -1.17
SRP54YPR088C YPL119C-AQ3E751 87 aa7.77□□□□□ -1.17
SRP54YPR088C PRP21P32524 280 aaPredicted RBP7.76□□□□□ -1.17
SRP54YPR088C PTR2P32901 601 aa7.76□□□□□ -1.17
SRP54YPR088C YBR138CP38277 524 aa7.76□□□□□ -1.17
SRP54YPR088C EGD2P38879 174 aaKnown RBP7.76□□□□□ -1.17
SRP54YPR088C FMP52P40008 231 aa7.76□□□□□ -1.17
SRP54YPR088C RNH70P53331 553 aa7.76□□□□□ -1.17
SRP54YPR088C TPS1Q00764 495 aaKnown RBP7.76□□□□□ -1.17
SRP54YPR088C SMP3Q04174 516 aa7.76□□□□□ -1.17
SRP54YPR088C YOL036WQ08206 761 aa7.76□□□□□ -1.17
SRP54YPR088C YDR061WQ12298 539 aa7.76□□□□□ -1.17
SRP54YPR088C ASF2P32448 525 aaPredicted RBP7.75□□□□□ -1.17
SRP54YPR088C RPS27AP35997 82 aaKnown RBP7.75□□□□□ -1.17
SRP54YPR088C YOR062CP36025 268 aa7.75□□□□□ -1.17
SRP54YPR088C BET3P36149 193 aa7.75□□□□□ -1.17
SRP54YPR088C RPS27BP38711 82 aa7.75□□□□□ -1.17
SRP54YPR088C SSZ1P38788 538 aaKnown RBP7.75□□□□□ -1.17
SRP54YPR088C NUP57P48837 541 aa7.75□□□□□ -1.17
SRP54YPR088C SLD3P53135 668 aa7.75□□□□□ -1.17
SRP54YPR088C YGR168CP53293 376 aa7.75□□□□□ -1.17
SRP54YPR088C RSN1Q03516 953 aa7.75□□□□□ -1.17
SRP54YPR088C SMA2Q04658 369 aa7.75□□□□□ -1.17
SRP54YPR088C RPS21BQ3E754 87 aaKnown RBP7.75□□□□□ -1.17
SRP54YPR088C URE2P23202 354 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C MXR2P25566 168 aa7.74□□□□□ -1.17
SRP54YPR088C VPS51P36116 164 aa7.74□□□□□ -1.17
SRP54YPR088C AHP1P38013 176 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C GOS1P38736 223 aa7.74□□□□□ -1.17
SRP54YPR088C YIL152WP40455 235 aa7.74□□□□□ -1.17
SRP54YPR088C TRM9P49957 279 aa7.74□□□□□ -1.17
SRP54YPR088C MPC1P53157 130 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C TLG1Q03322 224 aa7.74□□□□□ -1.17
SRP54YPR088C VPS36Q06696 566 aa7.74□□□□□ -1.17
SRP54YPR088C YOR365CQ08844 703 aa7.74□□□□□ -1.17
SRP54YPR088C MED11Q99278 115 aa7.74□□□□□ -1.17
SRP54YPR088C MOD5P07884 428 aa7.74□□□□□ -1.17
SRP54YPR088C YOL163WP0CF20 169 aa7.74□□□□□ -1.17
SRP54YPR088C TAL1P15019 335 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C MCK1P21965 375 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C KAP122P32767 1081 aa7.74□□□□□ -1.17
SRP54YPR088C FES1P38260 290 aa7.74□□□□□ -1.17
SRP54YPR088C YLF2P38746 405 aa7.74□□□□□ -1.17
SRP54YPR088C CTF8P38877 133 aa7.74□□□□□ -1.17
SRP54YPR088C TAT2P38967 592 aa7.74□□□□□ -1.17
SRP54YPR088C ISC1P40015 477 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C IMD4P50094 524 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C SNF12P53628 566 aa7.74□□□□□ -1.17
SRP54YPR088C CTL1Q03220 320 aaKnown RBP7.74□□□□□ -1.17
SRP54YPR088C GAL4P04386 881 aa7.73□□□□□ -1.17
SRP54YPR088C SIR3P06701 978 aa7.73□□□□□ -1.17
SRP54YPR088C RPC40P07703 335 aaKnown RBP7.73□□□□□ -1.17
SRP54YPR088C TFS1P14306 219 aa7.73□□□□□ -1.17
SRP54YPR088C YCK1P23291 538 aa7.73□□□□□ -1.17
SRP54YPR088C RPL5P26321 297 aaKnown RBP7.73□□□□□ -1.17
SRP54YPR088C TOD6P34219 525 aa7.73□□□□□ -1.17
SRP54YPR088C APE4P38821 490 aa7.73□□□□□ -1.17
SRP54YPR088C SOP4P39543 234 aaPredicted RBP7.73□□□□□ -1.17
SRP54YPR088C AVT6P40074 448 aa7.73□□□□□ -1.17
SRP54YPR088C ICE2P40499 491 aa7.73□□□□□ -1.17
SRP54YPR088C DUG1P43616 481 aaKnown RBP7.73□□□□□ -1.17
SRP54YPR088C SYF2P53277 215 aaPredicted RBP7.73□□□□□ -1.17
SRP54YPR088C YGR266WP53326 701 aa7.73□□□□□ -1.17
SRP54YPR088C SNP1Q00916 300 aaPredicted RBP7.73□□□□□ -1.17
SRP54YPR088C YSA1Q01976 231 aa7.73□□□□□ -1.17
SRP54YPR088C YDR179W-AQ03983 463 aa7.73□□□□□ -1.17
SRP54YPR088C YPR174CQ06616 221 aaPredicted RBP7.73□□□□□ -1.17
SRP54YPR088C GUP2Q08929 609 aa7.73□□□□□ -1.17
SRP54YPR088C HFA1P32874 2273 aa7.72□□□□□ -1.17
SRP54YPR088C BUD5P25300 642 aaPredicted RBP7.72□□□□□ -1.17
SRP54YPR088C YKR015CP36111 568 aa7.72□□□□□ -1.17
SRP54YPR088C AST2P39945 430 aaKnown RBP7.72□□□□□ -1.17
SRP54YPR088C GID8P40208 455 aa7.72□□□□□ -1.17
SRP54YPR088C SOK1P40317 901 aa7.72□□□□□ -1.17
SRP54YPR088C SPG5P42933 373 aa7.72□□□□□ -1.17
SRP54YPR088C ALB1P47019 175 aaPredicted RBP7.72□□□□□ -1.17
SRP54YPR088C APS3P47064 194 aa7.72□□□□□ -1.17
SRP54YPR088C MAL11P53048 616 aa7.72□□□□□ -1.17
SRP54YPR088C TPC1P53257 314 aa7.72□□□□□ -1.17
SRP54YPR088C MEP3P53390 489 aa7.72□□□□□ -1.17
SRP54YPR088C NAM8Q00539 523 aaKnown RBP7.72□□□□□ -1.17
SRP54YPR088C YOR214CQ12282 236 aa7.72□□□□□ -1.17
SRP54YPR088C PST2Q12335 198 aaKnown RBP7.72□□□□□ -1.17
SRP54YPR088C MMP1Q12372 583 aa7.72□□□□□ -1.17
SRP54YPR088C VMA6P32366 345 aaKnown RBP7.71□□□□□ -1.17
SRP54YPR088C DCG1P32460 244 aa7.71□□□□□ -1.17
SRP54YPR088C IFA38P38286 347 aa7.71□□□□□ -1.17
SRP54YPR088C IPT1P38954 527 aa7.71□□□□□ -1.17
SRP54YPR088C FAA3P39002 694 aa7.71□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms